EnhancerDB
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  3. vista29660[chr19:47394206-47394341]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29660[chr19:47394206-47394341]
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Tissue distribution of vista29660
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Transcription factor that possibly regulate vista29660[chr19:47394206-47394341]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 47393739 47394401 EP300 UCSC Txn Factor no Conserved 108418344
chr19 47393996 47394280 FOSL2 UCSC Txn Factor no Conserved 108418357
chr19 47394009 47394305 HNF4A UCSC Txn Factor no Conserved 108418363
chr19 47394011 47394314 FOXA1 UCSC Txn Factor no Conserved 108418366
chr19 47394013 47394301 FOXA2 UCSC Txn Factor no Conserved 108418367
chr19 47394036 47394219 JUND UCSC Txn Factor no Conserved 108418372
chr19 47394061 47394270 GATA3 UCSC Txn Factor no Conserved 108418376
chr19 47394102 47394374 CEBPB UCSC Txn Factor no Conserved 108418379
chr19 47394200 47394220 RREB1 JASPAR yes 70861278
chr19 47394200 47394220 RREB1 JASPAR yes 113609117
chr19 47394205 47394218 DUXA JASPAR yes 70861279
chr19 47394205 47394218 DUXA JASPAR yes 113609118
chr19 47394206 47394217 DUX4 JASPAR yes 70861280
chr19 47394206 47394217 DUX4 JASPAR yes 113609119
chr19 47394207 47394212 NFY TRANSFAC yes 70861281
chr19 47394207 47394212 NFY TRANSFAC yes 113609120
chr19 47394217 47394231 TLX1 JASPAR yes 70861282
chr19 47394217 47394231 TLX1 JASPAR yes 113609121
chr19 47394224 47394230 NFIC JASPAR yes 70861283
chr19 47394224 47394230 NFIC JASPAR yes 113609122
chr19 47394235 47394241 TCF4 TRANSFAC yes 70861284
chr19 47394235 47394241 TCF4 TRANSFAC yes 113609123
chr19 47394240 47394244 NFE TRANSFAC yes 70861285
chr19 47394240 47394244 NFE TRANSFAC yes 113609124
chr19 47394240 47394253 SMAD2 JASPAR yes 70861286
chr19 47394240 47394253 SMAD2 JASPAR yes 113609125
chr19 47394256 47394268 POU2F1 JASPAR yes 70861287
chr19 47394256 47394268 POU2F1 JASPAR yes 113609126
chr19 47394256 47394269 POU3F3 JASPAR yes 70861288
chr19 47394256 47394269 POU3F3 JASPAR yes 113609127
chr19 47394256 47394270 POU1F1 JASPAR yes 70861289
chr19 47394256 47394270 POU1F1 JASPAR yes 113609128
chr19 47394257 47394269 POU3F1 JASPAR yes 70861290
chr19 47394257 47394269 POU3F2 JASPAR yes 70861291
chr19 47394257 47394269 POU3F1 JASPAR yes 113609129
chr19 47394257 47394269 POU3F2 JASPAR yes 113609130
chr19 47394258 47394267 POU3F4 JASPAR yes 70861292
chr19 47394258 47394267 POU5F1B JASPAR yes 70861293
chr19 47394258 47394267 POU3F4 JASPAR yes 113609131
chr19 47394258 47394267 POU5F1B JASPAR yes 113609132
chr19 47394268 47394287 CTCF JASPAR yes 70861294
chr19 47394268 47394287 CTCF JASPAR yes 113609133
chr19 47394279 47394284 SP1 TRANSFAC yes 70861295
chr19 47394279 47394284 SP1 TRANSFAC yes 113609134
chr19 47394290 47394295 GATA2 JASPAR yes 70861296
chr19 47394290 47394295 GATA2 JASPAR yes 113609135
chr19 47394306 47394321 MEF2C JASPAR yes 70861297
chr19 47394306 47394321 MEF2C JASPAR yes 113609136
chr19 47394314 47394328 NR2F1 JASPAR yes 70861298
chr19 47394314 47394328 NR2F1 JASPAR yes 113609137
SNP sites on vista29660[chr19:47394206-47394341]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29660[chr19:47394206-47394341]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 47341393 47354249 - AP2S1 ENSG00000042753.7 47354249 0.6 1.0 17745 60043
chr19 47421933 47508334 + ARHGAP35 ENSG00000160007.13 47421933 0.68 1.0 17746 72408
Expression level of Genes
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miRNAs possibly regulated by vista29660[chr19:47394206-47394341]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results