EnhancerDB
  1. Home
  2. Enhancers
  3. vista29661[chr19:47448240-47448462]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29661[chr19:47448240-47448462]
Back to top
Tissue distribution of vista29661
Back to top
Transcription factor that possibly regulate vista29661[chr19:47448240-47448462]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 47448238 47448248 MSC JASPAR yes 70861299
chr19 47448238 47448248 MSC JASPAR yes 113614626
chr19 47448246 47448258 PBX1 JASPAR yes 70861300
chr19 47448246 47448258 PBX1 JASPAR yes 113614627
chr19 47448277 47448285 SP1 TRANSFAC yes 70861301
chr19 47448277 47448285 SP1 TRANSFAC yes 113614628
chr19 47448315 47448320 GATA2 JASPAR yes 70861302
chr19 47448315 47448320 GATA2 JASPAR yes 113614629
chr19 47448320 47448341 IRF1 JASPAR yes 70861303
chr19 47448320 47448341 IRF1 JASPAR yes 113614630
chr19 47448322 47448337 PRDM1 JASPAR yes 70861304
chr19 47448322 47448337 PRDM1 JASPAR yes 113614631
chr19 47448367 47448371 LFA1 TRANSFAC yes 70861305
chr19 47448367 47448371 LFA1 TRANSFAC yes 113614632
chr19 47448380 47448392 NHLH1 JASPAR yes 70861306
chr19 47448380 47448392 NHLH1 JASPAR yes 113614633
chr19 47448381 47448391 MSC JASPAR yes 70861307
chr19 47448381 47448391 NHLH1 JASPAR yes 70861308
chr19 47448381 47448391 TFAP4 JASPAR yes 70861309
chr19 47448381 47448391 MSC JASPAR yes 113614634
chr19 47448381 47448391 NHLH1 JASPAR yes 113614635
chr19 47448381 47448391 TFAP4 JASPAR yes 113614636
chr19 47448411 47448416 ETS2 TRANSFAC yes 70861310
chr19 47448411 47448416 ETS2 TRANSFAC yes 113614637
chr19 47448413 47448434 ZNF263 JASPAR yes 70861311
chr19 47448413 47448434 ZNF263 JASPAR yes 113614638
chr19 47448416 47448426 SP1 JASPAR yes 70861312
chr19 47448416 47448426 SP1 JASPAR yes 113614639
chr19 47448416 47448437 ZNF263 JASPAR yes 70861313
chr19 47448416 47448437 ZNF263 JASPAR yes 113614640
chr19 47448417 47448427 SP1 JASPAR yes 70861314
chr19 47448417 47448427 SP1 JASPAR yes 113614641
chr19 47448418 47448423 SP1 TRANSFAC yes 70861315
chr19 47448418 47448423 SP1 TRANSFAC yes 113614642
chr19 47448419 47448424 SP1 TRANSFAC yes 70861316
chr19 47448419 47448424 SP1 TRANSFAC yes 113614643
chr19 47448419 47448425 SP1 TRANSFAC yes 70861317
chr19 47448419 47448425 SP1 TRANSFAC yes 113614644
chr19 47448421 47448436 NR2C2 JASPAR yes 70861318
chr19 47448421 47448436 NR2C2 JASPAR yes 113614645
chr19 47448424 47448441 RXRA JASPAR yes 70861319
chr19 47448424 47448441 RXRA JASPAR yes 113614646
chr19 47448424 47448445 ZNF263 JASPAR yes 70861320
chr19 47448424 47448445 ZNF263 JASPAR yes 113614647
chr19 47448427 47448437 MZF1 JASPAR yes 70861321
chr19 47448427 47448437 MZF1 JASPAR yes 113614648
chr19 47448441 47448451 SP1 JASPAR yes 70861322
chr19 47448441 47448451 SP1 JASPAR yes 113614649
chr19 47448441 47448462 ZNF263 JASPAR yes 70861323
chr19 47448441 47448462 ZNF263 JASPAR yes 113614650
chr19 47448442 47448452 SP1 JASPAR yes 70861324
chr19 47448442 47448452 SP1 JASPAR yes 113614651
chr19 47448443 47448448 SP1 TRANSFAC yes 70861325
chr19 47448443 47448448 SP1 TRANSFAC yes 113614652
chr19 47448444 47448449 SP1 TRANSFAC yes 70861326
chr19 47448444 47448449 SP1 TRANSFAC yes 113614653
chr19 47448444 47448450 SP1 TRANSFAC yes 70861327
chr19 47448444 47448450 SP1 TRANSFAC yes 113614654
chr19 47448446 47448461 NR2C2 JASPAR yes 70861328
chr19 47448446 47448461 NR2C2 JASPAR yes 113614655
chr19 47448449 47448466 RXRA JASPAR yes 70861329
chr19 47448449 47448466 RXRA JASPAR yes 113614656
chr19 47448449 47448470 ZNF263 JASPAR yes 70861330
chr19 47448449 47448470 ZNF263 JASPAR yes 113614657
chr19 47448452 47448462 MZF1 JASPAR yes 70861331
chr19 47448452 47448462 MZF1 JASPAR yes 113614658
SNP sites on vista29661[chr19:47448240-47448462]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29661[chr19:47448240-47448462]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 47341393 47354249 - AP2S1 ENSG00000042753.7 47354249 0.6 1.0 17745 6009
chr19 47421933 47508334 + ARHGAP35 ENSG00000160007.13 47421933 0.68 1.0 17746 73693
chr19 47523077 47549033 + NPAS1 ENSG00000130751.5 47523077 0.89 1.0 17747 25385
Expression level of Genes
Back to top
miRNAs possibly regulated by vista29661[chr19:47448240-47448462]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results