EnhancerDB
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  3. vista29667[chr19:47600896-47601033]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29667[chr19:47600896-47601033]
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Tissue distribution of vista29667
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Transcription factor that possibly regulate vista29667[chr19:47600896-47601033]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 47600887 47600902 IRF9 JASPAR yes 70861591
chr19 47600887 47600902 IRF9 JASPAR yes 113623463
chr19 47600915 47600924 NKX3-2 JASPAR yes 70861592
chr19 47600915 47600924 NKX3-2 JASPAR yes 113623464
chr19 47600915 47600925 NKX2-3 JASPAR yes 70861593
chr19 47600915 47600925 NKX2-3 JASPAR yes 113623465
chr19 47600916 47600924 ISL2 JASPAR yes 70861594
chr19 47600916 47600924 ISL2 JASPAR yes 113623466
chr19 47600921 47600924 MYB TRANSFAC yes 70861595
chr19 47600921 47600924 MYB TRANSFAC yes 113623467
chr19 47600952 47600962 GSC2 JASPAR yes 70861596
chr19 47600952 47600962 GSC2 JASPAR yes 113623468
chr19 47600953 47600961 OTX1 JASPAR yes 70861597
chr19 47600953 47600961 OTX2 JASPAR yes 70861598
chr19 47600953 47600961 RHOXF1 JASPAR yes 70861599
chr19 47600953 47600961 OTX1 JASPAR yes 113623469
chr19 47600953 47600961 OTX2 JASPAR yes 113623470
chr19 47600953 47600961 RHOXF1 JASPAR yes 113623471
chr19 47600953 47600962 PITX3 JASPAR yes 70861600
chr19 47600953 47600962 PITX3 JASPAR yes 113623472
chr19 47600960 47600974 EBF1 JASPAR yes 70861601
chr19 47600960 47600974 EBF1 JASPAR yes 113623473
chr19 47600962 47600968 NFIC JASPAR yes 70861602
chr19 47600962 47600968 NFIC JASPAR yes 113623474
chr19 47600992 47601001 PITX3 JASPAR yes 70861603
chr19 47600992 47601001 PITX3 JASPAR yes 113623475
chr19 47600992 47601002 GSC2 JASPAR yes 70861604
chr19 47600992 47601002 GSC JASPAR yes 70861605
chr19 47600992 47601002 GSC2 JASPAR yes 113623476
chr19 47600992 47601002 GSC JASPAR yes 113623477
chr19 47600993 47601001 RHOXF1 JASPAR yes 70861606
chr19 47600993 47601001 RHOXF1 JASPAR yes 113623478
chr19 47601012 47601025 NFKB1 JASPAR yes 70861607
chr19 47601012 47601025 NFKB2 JASPAR yes 70861608
chr19 47601012 47601025 NFKB1 JASPAR yes 113623479
chr19 47601012 47601025 NFKB2 JASPAR yes 113623480
chr19 47601013 47601024 NFKB1 JASPAR yes 70861609
chr19 47601013 47601024 NFKB1 JASPAR yes 113623481
chr19 47601014 47601019 ETS2 TRANSFAC yes 70861610
chr19 47601014 47601019 ETS2 TRANSFAC yes 113623482
chr19 47601014 47601024 NFKB1 JASPAR yes 70861611
chr19 47601014 47601024 RELA JASPAR yes 70861612
chr19 47601014 47601024 NFKB1 JASPAR yes 113623483
chr19 47601014 47601024 RELA JASPAR yes 113623484
chr19 47601014 47601025 NFKB1 JASPAR yes 70861613
chr19 47601014 47601025 NFKB1 JASPAR yes 113623485
SNP sites on vista29667[chr19:47600896-47601033]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29667[chr19:47600896-47601033]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 47523077 47549033 + NPAS1 ENSG00000130751.5 47523077 0.89 1.0 17747 22181
chr19 47549165 47551888 - TMEM160 ENSG00000130748.6 47551888 0.85 0.99 17748 50992
chr19 47567444 47617009 - ZC3H4 ENSG00000130749.5 47617009 0.69 1.0 17749 84024
chr19 47616531 47713886 + SAE1 ENSG00000142230.7 47616531 0.76 1.0 17750 84502
Expression level of Genes
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miRNAs possibly regulated by vista29667[chr19:47600896-47601033]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results