EnhancerDB
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  3. vista2967[chr1:112286281-112286588]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2967[chr1:112286281-112286588]
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Tissue distribution of vista2967
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Transcription factor that possibly regulate vista2967[chr1:112286281-112286588]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 112286292 112286297 GATA2 JASPAR yes 31543822
chr1 112286292 112286297 GATA2 JASPAR yes 118352487
chr1 112286308 112286323 RFX5 JASPAR yes 31543823
chr1 112286308 112286323 RFX5 JASPAR yes 118352488
chr1 112286335 112286346 ELF5 JASPAR yes 31543824
chr1 112286335 112286346 SPDEF JASPAR yes 31543825
chr1 112286335 112286346 ELF5 JASPAR yes 118352489
chr1 112286335 112286346 SPDEF JASPAR yes 118352490
chr1 112286358 112286369 RUNX1 JASPAR yes 31543826
chr1 112286358 112286369 RUNX1 JASPAR yes 118352491
chr1 112286364 112286368 ESR1 TRANSFAC yes 31543827
chr1 112286364 112286368 ESR1 TRANSFAC yes 118352492
chr1 112286382 112286393 DUX4 JASPAR yes 31543828
chr1 112286382 112286393 DUX4 JASPAR yes 118352493
chr1 112286393 112286396 MYB TRANSFAC yes 31543829
chr1 112286393 112286396 MYB TRANSFAC yes 118352494
chr1 112286403 112286414 EBF1 JASPAR yes 31543830
chr1 112286403 112286414 EBF1 JASPAR yes 118352495
chr1 112286406 112286417 ESRRA JASPAR yes 31543831
chr1 112286406 112286417 ESRRA JASPAR yes 118352496
chr1 112286408 112286422 NR2F1 JASPAR yes 31543832
chr1 112286408 112286422 NR2F1 JASPAR yes 118352497
chr1 112286410 112286414 LFA1 TRANSFAC yes 31543833
chr1 112286410 112286414 LFA1 TRANSFAC yes 118352498
chr1 112286415 112286420 SP1 TRANSFAC yes 31543834
chr1 112286415 112286420 SP1 TRANSFAC yes 118352499
chr1 112286418 112286437 REST JASPAR yes 31543835
chr1 112286418 112286437 REST JASPAR yes 118352500
chr1 112286421 112286425 NFE TRANSFAC yes 31543836
chr1 112286421 112286425 NFE TRANSFAC yes 118352501
chr1 112286422 112286427 GATA2 JASPAR yes 31543837
chr1 112286422 112286427 GATA2 JASPAR yes 118352502
chr1 112286424 112286430 MZF1 JASPAR yes 31543838
chr1 112286424 112286430 MZF1 JASPAR yes 118352503
chr1 112286439 112286444 ETS2 TRANSFAC yes 31543839
chr1 112286439 112286444 ETS2 TRANSFAC yes 118352504
chr1 112286460 112286466 NFIC JASPAR yes 31543840
chr1 112286460 112286466 NFIC JASPAR yes 118352505
chr1 112286477 112286481 H1TF2 TRANSFAC yes 31543841
chr1 112286477 112286481 NFE TRANSFAC yes 31543842
chr1 112286477 112286481 SRF TRANSFAC yes 31543843
chr1 112286477 112286481 H1TF2 TRANSFAC yes 118352506
chr1 112286477 112286481 NFE TRANSFAC yes 118352507
chr1 112286477 112286481 SRF TRANSFAC yes 118352508
chr1 112286478 112286489 DUX4 JASPAR yes 31543844
chr1 112286478 112286489 DUX4 JASPAR yes 118352509
chr1 112286479 112286499 RREB1 JASPAR yes 31543845
chr1 112286479 112286499 RREB1 JASPAR yes 118352510
chr1 112286513 112286524 ETV2 JASPAR yes 31543846
chr1 112286513 112286524 ETV2 JASPAR yes 118352511
chr1 112286514 112286532 NR3C1 JASPAR yes 31543847
chr1 112286514 112286532 NR3C1 JASPAR yes 118352512
chr1 112286515 112286533 ESR2 JASPAR yes 31543848
chr1 112286515 112286533 ESR2 JASPAR yes 118352513
chr1 112286516 112286531 ESR2 JASPAR yes 31543849
chr1 112286516 112286531 ESR2 JASPAR yes 118352514
chr1 112286516 112286536 ESR1 JASPAR yes 31543850
chr1 112286516 112286536 ESR1 JASPAR yes 118352515
chr1 112286531 112286545 FOXF2 JASPAR yes 31543851
chr1 112286531 112286545 FOXF2 JASPAR yes 118352516
chr1 112286531 112286546 FOXP1 JASPAR yes 31543852
chr1 112286531 112286546 FOXP1 JASPAR yes 118352517
chr1 112286532 112286546 GATA2 JASPAR yes 31543853
chr1 112286532 112286546 GATA2 JASPAR yes 118352518
chr1 112286534 112286542 GATA3 JASPAR yes 31543854
chr1 112286534 112286542 GATA3 JASPAR yes 118352519
chr1 112286534 112286545 FOXP2 JASPAR yes 31543855
chr1 112286534 112286545 FOXP2 JASPAR yes 118352520
chr1 112286536 112286544 FOXG1 JASPAR yes 31543856
chr1 112286536 112286544 FOXG1 JASPAR yes 118352521
chr1 112286538 112286544 HiNF-A TRANSFAC yes 31543857
chr1 112286538 112286544 HiNF-A TRANSFAC yes 118352522
chr1 112286538 112286548 MAX JASPAR yes 31543858
chr1 112286538 112286548 MAX JASPAR yes 118352523
chr1 112286539 112286549 CLOCK JASPAR yes 31543859
chr1 112286539 112286549 CLOCK JASPAR yes 118352524
chr1 112286550 112286560 TEAD1 JASPAR yes 31543860
chr1 112286550 112286560 TEAD4 JASPAR yes 31543861
chr1 112286550 112286560 TEAD1 JASPAR yes 118352525
chr1 112286550 112286560 TEAD4 JASPAR yes 118352526
chr1 112286551 112286559 TEAD3 JASPAR yes 31543862
chr1 112286551 112286559 TEF-1 TRANSFAC yes 31543863
chr1 112286551 112286559 TEAD3 JASPAR yes 118352527
chr1 112286551 112286559 TEF-1 TRANSFAC yes 118352528
chr1 112286584 112286598 EBF1 JASPAR yes 31543864
chr1 112286584 112286598 EBF1 JASPAR yes 118352529
chr1 112286585 112286596 EBF1 JASPAR yes 31543865
chr1 112286585 112286596 EBF1 JASPAR yes 118352530
chr1 112286586 112286597 EBF1 JASPAR yes 31543866
chr1 112286586 112286597 EBF1 JASPAR yes 118352531
SNP sites on vista2967[chr1:112286281-112286588]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 112286309 rs197394 T C
RFX5
560862
chr1 112286413 rs116275839 G A
EBF1 ESRRA LFA1 NR2F1
560863
chr1 112286485 rs139224242 C T
DUX4 RREB1
560864
chr1 112286516 rs181570005 C T
ESR1 ESR2 ETV2 NR3C1
560865
chr1 112286520 rs141507860 A G
ESR1 ESR2 ETV2 NR3C1
560866
Genes possibly regulated by vista2967[chr1:112286281-112286588]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 112223252 112298446 - FAM212B ENSG00000197852.8 112298446 0.67 1.0 1019 88142
chr1 112297867 112310638 + DDX20 ENSG00000064703.7 112297867 0.64 0.98 1020 88721
Expression level of Genes
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miRNAs possibly regulated by vista2967[chr1:112286281-112286588]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results