EnhancerDB
  1. Home
  2. Enhancers
  3. vista29670[chr19:47613231-47613789]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29670[chr19:47613231-47613789]
Back to top
Tissue distribution of vista29670
Back to top
Transcription factor that possibly regulate vista29670[chr19:47613231-47613789]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 47612614 47618087 POLR2A UCSC Txn Factor no Conserved 108418977
chr19 47612614 47618087 POLR2A UCSC Txn Factor no Conserved 108418978
chr19 47613072 47613497 MYC UCSC Txn Factor no Conserved 108419017
chr19 47613073 47613509 MAX UCSC Txn Factor no Conserved 108419018
chr19 47613231 47613242 E2F6 JASPAR yes 70861725
chr19 47613231 47613242 E2F6 JASPAR yes 113625056
chr19 47613231 47613245 E2F7 JASPAR yes 70861726
chr19 47613231 47613245 E2F7 JASPAR yes 113625057
chr19 47613240 47613260 TP63 JASPAR yes 70861727
chr19 47613240 47613260 TP63 JASPAR yes 113625058
chr19 47613241 47613259 TP53 JASPAR yes 70861728
chr19 47613241 47613259 TP63 JASPAR yes 70861729
chr19 47613241 47613259 TP73 JASPAR yes 70861730
chr19 47613241 47613259 TP53 JASPAR yes 113625059
chr19 47613241 47613259 TP63 JASPAR yes 113625060
chr19 47613241 47613259 TP73 JASPAR yes 113625061
chr19 47613243 47613258 TP53 JASPAR yes 70861731
chr19 47613243 47613258 TP53 JASPAR yes 113625062
chr19 47613257 47613260 MYB TRANSFAC yes 70861732
chr19 47613257 47613260 MYB TRANSFAC yes 113625063
chr19 47613288 47613298 MAX JASPAR yes 70861733
chr19 47613288 47613298 MAX JASPAR yes 113625064
chr19 47613300 47613310 LEF1 TRANSFAC yes 70861734
chr19 47613300 47613310 LEF1 TRANSFAC yes 113625065
chr19 47613302 47613308 SOX10 JASPAR yes 70861735
chr19 47613302 47613308 SOX10 JASPAR yes 113625066
chr19 47613314 47613327 SMAD2 JASPAR yes 70861736
chr19 47613314 47613327 SMAD2 JASPAR yes 113625067
chr19 47613337 47613351 RORA JASPAR yes 70861737
chr19 47613337 47613351 RORA JASPAR yes 113625068
chr19 47613396 47613399 MYB TRANSFAC yes 70861738
chr19 47613396 47613399 MYB TRANSFAC yes 113625069
chr19 47613404 47613419 RUNX2 JASPAR yes 70861739
chr19 47613404 47613419 RUNX2 JASPAR yes 113625070
chr19 47613445 47613454 NKX2-8 JASPAR yes 70861740
chr19 47613445 47613454 NKX2-8 JASPAR yes 113625071
chr19 47613454 47613458 H1TF2 TRANSFAC yes 70861741
chr19 47613454 47613458 NFE TRANSFAC yes 70861742
chr19 47613454 47613458 SRF TRANSFAC yes 70861743
chr19 47613454 47613458 H1TF2 TRANSFAC yes 113625072
chr19 47613454 47613458 NFE TRANSFAC yes 113625073
chr19 47613454 47613458 SRF TRANSFAC yes 113625074
chr19 47613458 47613478 RREB1 JASPAR yes 70861744
chr19 47613458 47613478 RREB1 JASPAR yes 113625075
chr19 47613460 47613480 RREB1 JASPAR yes 70861745
chr19 47613460 47613480 RREB1 JASPAR yes 113625076
chr19 47613465 47613470 TFAP2A TRANSFAC yes 70861746
chr19 47613465 47613470 TFAP2A TRANSFAC yes 113625077
chr19 47613465 47613471 MZF1 JASPAR yes 70861747
chr19 47613465 47613471 MZF1 JASPAR yes 113625078
chr19 47613465 47613486 ZNF263 JASPAR yes 70861748
chr19 47613465 47613486 ZNF263 JASPAR yes 113625079
chr19 47613466 47613487 ZNF263 JASPAR yes 70861749
chr19 47613466 47613487 ZNF263 JASPAR yes 113625080
chr19 47613467 47613488 ZNF263 JASPAR yes 70861750
chr19 47613467 47613488 ZNF263 JASPAR yes 113625081
chr19 47613471 47613481 ZNF740 JASPAR yes 70861751
chr19 47613471 47613481 ZNF740 JASPAR yes 113625082
chr19 47613474 47613484 SP1 JASPAR yes 70861752
chr19 47613474 47613484 SP1 JASPAR yes 113625083
chr19 47613475 47613484 SP1 TRANSFAC yes 70861753
chr19 47613475 47613484 SP1 TRANSFAC yes 113625084
chr19 47613475 47613485 SP1 JASPAR yes 70861754
chr19 47613475 47613485 SP1 JASPAR yes 113625085
chr19 47613476 47613485 SP1 TRANSFAC yes 70861755
chr19 47613476 47613485 SP1 TRANSFAC yes 113625086
chr19 47613477 47613483 MAZ TRANSFAC yes 70861756
chr19 47613477 47613483 MAZ TRANSFAC yes 113625087
chr19 47613485 47613494 VENTX JASPAR yes 70861757
chr19 47613485 47613494 VENTX JASPAR yes 113625088
chr19 47613488 47613492 YY1 TRANSFAC yes 70861758
chr19 47613488 47613492 YY1 TRANSFAC yes 113625089
chr19 47613490 47613504 POU1F1 JASPAR yes 70861759
chr19 47613490 47613504 POU1F1 JASPAR yes 113625090
chr19 47613491 47613503 POU3F1 JASPAR yes 70861760
chr19 47613491 47613503 POU3F2 JASPAR yes 70861761
chr19 47613491 47613503 POU3F1 JASPAR yes 113625091
chr19 47613491 47613503 POU3F2 JASPAR yes 113625092
chr19 47613491 47613504 POU3F3 JASPAR yes 70861762
chr19 47613491 47613504 POU3F3 JASPAR yes 113625093
chr19 47613492 47613504 POU2F1 JASPAR yes 70861763
chr19 47613492 47613504 POU2F1 JASPAR yes 113625094
chr19 47613493 47613502 POU3F4 JASPAR yes 70861764
chr19 47613493 47613502 POU5F1B JASPAR yes 70861765
chr19 47613493 47613502 POU3F4 JASPAR yes 113625095
chr19 47613493 47613502 POU5F1B JASPAR yes 113625096
chr19 47613503 47613519 POU4F2 JASPAR yes 70861766
chr19 47613503 47613519 POU4F3 JASPAR yes 70861767
chr19 47613503 47613519 POU4F2 JASPAR yes 113625097
chr19 47613503 47613519 POU4F3 JASPAR yes 113625098
chr19 47613507 47613517 HOXC10 JASPAR yes 70861768
chr19 47613507 47613517 HOXD11 JASPAR yes 70861769
chr19 47613507 47613517 HOXC10 JASPAR yes 113625099
chr19 47613507 47613517 HOXD11 JASPAR yes 113625100
chr19 47613555 47613560 GATA2 JASPAR yes 70861770
chr19 47613555 47613560 GATA2 JASPAR yes 113625101
chr19 47613556 47613562 ZNF354C JASPAR yes 70861771
chr19 47613556 47613562 ZNF354C JASPAR yes 113625102
chr19 47613566 47613572 TCF1 TRANSFAC yes 70861772
chr19 47613566 47613572 TCF1 TRANSFAC yes 113625103
chr19 47613586 47613592 SOX10 JASPAR yes 70861773
chr19 47613586 47613592 SOX10 JASPAR yes 113625104
chr19 47613596 47613617 IRF1 JASPAR yes 70861774
chr19 47613596 47613617 IRF1 JASPAR yes 113625105
chr19 47613598 47613603 MYB TRANSFAC yes 70861775
chr19 47613598 47613603 MYB TRANSFAC yes 113625106
chr19 47613603 47613613 NFATC3 JASPAR yes 70861776
chr19 47613603 47613613 NFATC3 JASPAR yes 113625107
chr19 47613615 47613624 NFIX JASPAR yes 70861777
chr19 47613615 47613624 NFIX JASPAR yes 113625108
chr19 47613617 47613623 NFIC JASPAR yes 70861778
chr19 47613617 47613623 NFIC JASPAR yes 113625109
chr19 47613628 47613636 FOXO3 JASPAR yes 70861779
chr19 47613628 47613636 FOXO3 JASPAR yes 113625110
chr19 47613647 47613661 ONECUT1 JASPAR yes 70861780
chr19 47613647 47613661 ONECUT2 JASPAR yes 70861781
chr19 47613647 47613661 ONECUT3 JASPAR yes 70861782
chr19 47613647 47613661 ONECUT1 JASPAR yes 113625111
chr19 47613647 47613661 ONECUT2 JASPAR yes 113625112
chr19 47613647 47613661 ONECUT3 JASPAR yes 113625113
chr19 47613672 47613675 MYB TRANSFAC yes 70861783
chr19 47613672 47613675 MYB TRANSFAC yes 113625114
chr19 47613683 47613698 STAT1 JASPAR yes 70861784
chr19 47613683 47613698 STAT1 JASPAR yes 113625115
chr19 47613685 47613696 STAT1 JASPAR yes 70861785
chr19 47613685 47613696 STAT3 JASPAR yes 70861786
chr19 47613685 47613696 STAT1 JASPAR yes 113625116
chr19 47613685 47613696 STAT3 JASPAR yes 113625117
chr19 47613703 47613708 ATF1 TRANSFAC yes 70861787
chr19 47613703 47613708 ATF1 TRANSFAC yes 113625118
chr19 47613705 47613717 HNF1B JASPAR yes 70861788
chr19 47613705 47613717 HNF1B JASPAR yes 113625119
chr19 47613711 47613726 HNF1A JASPAR yes 70861789
chr19 47613711 47613726 HNF1A JASPAR yes 113625120
chr19 47613712 47613725 HNF1B JASPAR yes 70861790
chr19 47613712 47613725 HNF1B JASPAR yes 113625121
chr19 47613718 47613733 HNF1A JASPAR yes 70861791
chr19 47613718 47613733 HNF1A JASPAR yes 113625122
chr19 47613719 47613731 HNF1B JASPAR yes 70861792
chr19 47613719 47613731 HNF1B JASPAR yes 113625123
chr19 47613719 47613732 HNF1B JASPAR yes 70861793
chr19 47613719 47613732 HNF1B JASPAR yes 113625124
chr19 47613726 47613731 MYB TRANSFAC yes 70861794
chr19 47613726 47613731 MYB TRANSFAC yes 113625125
SNP sites on vista29670[chr19:47613231-47613789]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29670[chr19:47613231-47613789]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 47523077 47549033 + NPAS1 ENSG00000130751.5 47523077 0.89 1.0 17747 9846
chr19 47549165 47551888 - TMEM160 ENSG00000130748.6 47551888 0.85 0.99 17748 38657
chr19 47567444 47617009 - ZC3H4 ENSG00000130749.5 47617009 0.69 1.0 17749 96780
chr19 47616531 47713886 + SAE1 ENSG00000142230.7 47616531 0.76 1.0 17750 97258
Expression level of Genes
Back to top
miRNAs possibly regulated by vista29670[chr19:47613231-47613789]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results