EnhancerDB
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  3. vista29675[chr19:47742856-47743228]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29675[chr19:47742856-47743228]
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Tissue distribution of vista29675
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Transcription factor that possibly regulate vista29675[chr19:47742856-47743228]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 47742874 47742879 SP1 TRANSFAC yes 70862076
chr19 47742874 47742879 SP1 TRANSFAC yes 113633204
chr19 47742874 47742880 SP1 TRANSFAC yes 70862077
chr19 47742874 47742880 SP1 TRANSFAC yes 113633205
chr19 47742876 47742886 SP1 JASPAR yes 70862078
chr19 47742876 47742886 SP1 JASPAR yes 113633206
chr19 47742877 47742885 SP1 TRANSFAC yes 70862079
chr19 47742877 47742885 SP1 TRANSFAC yes 113633207
chr19 47742878 47742883 SP1 TRANSFAC yes 70862080
chr19 47742878 47742883 SP1 TRANSFAC yes 113633208
chr19 47742879 47742884 SP1 TRANSFAC yes 70862081
chr19 47742879 47742884 SP1 TRANSFAC yes 113633209
chr19 47742879 47742885 SP1 TRANSFAC yes 70862082
chr19 47742879 47742885 SP1 TRANSFAC yes 113633210
chr19 47742883 47742888 SP1 TRANSFAC yes 70862083
chr19 47742883 47742888 SP1 TRANSFAC yes 113633211
chr19 47742893 47742908 RFX5 JASPAR yes 70862084
chr19 47742893 47742908 RFX5 JASPAR yes 113633212
chr19 47742897 47742909 INSM1 JASPAR yes 70862085
chr19 47742897 47742909 INSM1 JASPAR yes 113633213
chr19 47742901 47742919 ESR1 JASPAR yes 70862086
chr19 47742901 47742919 ESR1 JASPAR yes 113633214
chr19 47742911 47742916 SP1 TRANSFAC yes 70862087
chr19 47742911 47742916 SP1 TRANSFAC yes 113633215
chr19 47742912 47742932 TP63 JASPAR yes 70862088
chr19 47742912 47742932 TP63 JASPAR yes 113633216
chr19 47742921 47742932 NRF1 JASPAR yes 70862089
chr19 47742921 47742932 NRF1 JASPAR yes 113633217
chr19 47742922 47742933 NRF1 JASPAR yes 70862090
chr19 47742922 47742933 NRF1 JASPAR yes 113633218
chr19 47742930 47742940 ZNF740 JASPAR yes 70862091
chr19 47742930 47742940 ZNF740 JASPAR yes 113633219
chr19 47742931 47742941 MZF1 JASPAR yes 70862092
chr19 47742931 47742941 SP1 JASPAR yes 70862093
chr19 47742931 47742941 ZNF740 JASPAR yes 70862094
chr19 47742931 47742941 MZF1 JASPAR yes 113633220
chr19 47742931 47742941 SP1 JASPAR yes 113633221
chr19 47742931 47742941 ZNF740 JASPAR yes 113633222
chr19 47742934 47742940 SP1 TRANSFAC yes 70862095
chr19 47742934 47742940 SP1 TRANSFAC yes 113633223
chr19 47742934 47742944 SP1 JASPAR yes 70862096
chr19 47742934 47742944 SP1 JASPAR yes 113633224
chr19 47742969 47742988 RFX2 JASPAR yes 70862097
chr19 47742969 47742988 RFX2 JASPAR yes 113633225
chr19 47742973 47742989 RFX4 JASPAR yes 70862098
chr19 47742973 47742989 RFX5 JASPAR yes 70862099
chr19 47742973 47742989 RFX4 JASPAR yes 113633226
chr19 47742973 47742989 RFX5 JASPAR yes 113633227
chr19 47742992 47742997 SP1 TRANSFAC yes 70862100
chr19 47742992 47742997 SP1 TRANSFAC yes 113633228
chr19 47742992 47742998 SP1 TRANSFAC yes 70862101
chr19 47742992 47742998 SP1 TRANSFAC yes 113633229
chr19 47742999 47743010 NFE2L2 JASPAR yes 70862102
chr19 47742999 47743010 NFE2L2 JASPAR yes 113633230
chr19 47743026 47743037 E2F1 JASPAR yes 70862103
chr19 47743026 47743037 E2F1 JASPAR yes 113633231
chr19 47743032 47743043 NFKB1 JASPAR yes 70862104
chr19 47743032 47743043 NFKB1 JASPAR yes 113633232
chr19 47743034 47743046 ZBTB7B JASPAR yes 70862105
chr19 47743034 47743046 ZBTB7B JASPAR yes 113633233
chr19 47743036 47743050 GLIS2 JASPAR yes 70862106
chr19 47743036 47743050 GLIS3 JASPAR yes 70862107
chr19 47743036 47743050 GLIS2 JASPAR yes 113633234
chr19 47743036 47743050 GLIS3 JASPAR yes 113633235
chr19 47743037 47743049 TFAP2A JASPAR yes 70862108
chr19 47743037 47743049 TFAP2A JASPAR yes 113633236
chr19 47743038 47743049 TFAP2A JASPAR yes 70862109
chr19 47743038 47743049 TFAP2A JASPAR yes 113633237
chr19 47743038 47743052 PLAG1 JASPAR yes 70862110
chr19 47743038 47743052 PLAG1 JASPAR yes 113633238
chr19 47743039 47743048 TFAP2A JASPAR yes 70862111
chr19 47743039 47743048 TFAP2A JASPAR yes 113633239
chr19 47743046 47743055 SP1 TRANSFAC yes 70862112
chr19 47743046 47743055 SP1 TRANSFAC yes 113633240
chr19 47743047 47743053 SP1 TRANSFAC yes 70862113
chr19 47743047 47743053 SP1 TRANSFAC yes 113633241
chr19 47743049 47743054 SP1 TRANSFAC yes 70862114
chr19 47743049 47743054 SP1 TRANSFAC yes 113633242
chr19 47743066 47743077 NRF1 JASPAR yes 70862115
chr19 47743066 47743077 NRF1 JASPAR yes 113633243
chr19 47743074 47743078 H1TF2 TRANSFAC yes 70862116
chr19 47743074 47743078 NFE TRANSFAC yes 70862117
chr19 47743074 47743078 SRF TRANSFAC yes 70862118
chr19 47743074 47743078 H1TF2 TRANSFAC yes 113633244
chr19 47743074 47743078 NFE TRANSFAC yes 113633245
chr19 47743074 47743078 SRF TRANSFAC yes 113633246
chr19 47743078 47743091 TFAP2A JASPAR yes 70862119
chr19 47743078 47743091 TFAP2A JASPAR yes 113633247
chr19 47743082 47743087 SP1 TRANSFAC yes 70862120
chr19 47743082 47743087 SP1 TRANSFAC yes 113633248
chr19 47743083 47743088 SP1 TRANSFAC yes 70862121
chr19 47743083 47743088 SP1 TRANSFAC yes 113633249
chr19 47743083 47743092 THAP1 JASPAR yes 70862122
chr19 47743083 47743092 THAP1 JASPAR yes 113633250
chr19 47743086 47743090 LFA1 TRANSFAC yes 70862123
chr19 47743086 47743090 LFA1 TRANSFAC yes 113633251
chr19 47743091 47743110 REST JASPAR yes 70862124
chr19 47743091 47743110 REST JASPAR yes 113633252
chr19 47743118 47743136 NFYA JASPAR yes 70862125
chr19 47743118 47743136 NFYA JASPAR yes 113633253
chr19 47743121 47743137 NFYA JASPAR yes 70862126
chr19 47743121 47743137 NFYA JASPAR yes 113633254
chr19 47743124 47743139 NFYB JASPAR yes 70862127
chr19 47743124 47743139 NFYB JASPAR yes 113633255
chr19 47743138 47743150 HINFP JASPAR yes 70862128
chr19 47743138 47743150 HINFP JASPAR yes 113633256
chr19 47743144 47743149 SP1 TRANSFAC yes 70862129
chr19 47743144 47743149 SP1 TRANSFAC yes 113633257
chr19 47743146 47743157 SPDEF JASPAR yes 70862130
chr19 47743146 47743157 SPDEF JASPAR yes 113633258
chr19 47743156 47743167 NFKB1 JASPAR yes 70862131
chr19 47743156 47743167 NFKB1 JASPAR yes 113633259
chr19 47743166 47743182 GLIS1 JASPAR yes 70862132
chr19 47743166 47743182 GLIS1 JASPAR yes 113633260
chr19 47743167 47743181 GLIS2 JASPAR yes 70862133
chr19 47743167 47743181 GLIS2 JASPAR yes 113633261
chr19 47743174 47743181 SP1 TRANSFAC yes 70862134
chr19 47743174 47743181 SP1 TRANSFAC yes 113633262
chr19 47743174 47743184 SP1 JASPAR yes 70862135
chr19 47743174 47743184 SP1 JASPAR yes 113633263
chr19 47743175 47743183 SP1 TRANSFAC yes 70862136
chr19 47743175 47743183 SP1 TRANSFAC yes 113633264
chr19 47743175 47743184 SP1 TRANSFAC yes 70862137
chr19 47743175 47743184 SP1 TRANSFAC yes 113633265
chr19 47743175 47743185 SP1 JASPAR yes 70862138
chr19 47743175 47743185 SP1 JASPAR yes 113633266
chr19 47743176 47743181 SP1 TRANSFAC yes 70862139
chr19 47743176 47743181 SP1 TRANSFAC yes 113633267
chr19 47743176 47743187 E2F4 JASPAR yes 70862140
chr19 47743176 47743187 E2F4 JASPAR yes 113633268
chr19 47743177 47743182 SP1 TRANSFAC yes 70862141
chr19 47743177 47743182 SP1 TRANSFAC yes 113633269
chr19 47743177 47743183 SP1 TRANSFAC yes 70862142
chr19 47743177 47743183 SP1 TRANSFAC yes 113633270
chr19 47743190 47743199 TFAP2A JASPAR yes 70862143
chr19 47743190 47743199 TFAP2A JASPAR yes 113633271
SNP sites on vista29675[chr19:47742856-47743228]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29675[chr19:47742856-47743228]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 47724081 47736023 - BBC3 ENSG00000105327.11 47736023 0.71 1.0 17751 93167
chr19 47759237 47775210 + CCDC9 ENSG00000105321.8 47759237 0.65 1.0 17752 83991
chr19 47778142 47778979 + PRR24 ENSG00000257704.2 47778142 0.73 1.0 17753 65086
chr19 47793280 47825323 + C5AR1 ENSG00000197405.3 47793280 0.91 1.0 17754 49948
chr19 47835404 47846606 + C5AR2 ENSG00000134830.3 47835404 0.95 0.96 17755 7824
Expression level of Genes
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miRNAs possibly regulated by vista29675[chr19:47742856-47743228]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 47730247 47730268 - hsa-miR-3191-5p MIMAT0022732 47734455 0.10047417659874407 0.916667 0.0 858
Expression level of miRNAs
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