EnhancerDB
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  3. vista29709[chr19:48101913-48102072]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29709[chr19:48101913-48102072]
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Tissue distribution of vista29709
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Transcription factor that possibly regulate vista29709[chr19:48101913-48102072]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 48101933 48101937 YY1 TRANSFAC yes 70863846
chr19 48101933 48101937 YY1 TRANSFAC yes 113645034
chr19 48101935 48101942 NKX3-1 JASPAR yes 70863847
chr19 48101935 48101942 NKX3-1 JASPAR yes 113645035
chr19 48101940 48101944 TEAD2 TRANSFAC yes 70863848
chr19 48101940 48101944 TEAD2 TRANSFAC yes 113645036
chr19 48101942 48101945 MYB TRANSFAC yes 70863849
chr19 48101942 48101945 MYB TRANSFAC yes 113645037
chr19 48101952 48101962 NFKB1 JASPAR yes 70863850
chr19 48101952 48101962 NFKB1 JASPAR yes 113645038
chr19 48101963 48101980 PAX1 JASPAR yes 70863851
chr19 48101963 48101980 PAX1 JASPAR yes 113645039
chr19 48101979 48101988 CDX1 JASPAR yes 70863852
chr19 48101979 48101988 CDX1 JASPAR yes 113645040
chr19 48101979 48101990 CDX2 JASPAR yes 70863853
chr19 48101979 48101990 CDX2 JASPAR yes 113645041
chr19 48101986 48101992 YY1 JASPAR yes 70863854
chr19 48101986 48101992 YY1 JASPAR yes 113645042
chr19 48102013 48102024 HOXC12 JASPAR yes 70863855
chr19 48102013 48102024 HOXC12 JASPAR yes 113645043
chr19 48102014 48102024 HOXC10 JASPAR yes 70863856
chr19 48102014 48102024 HOXD11 JASPAR yes 70863857
chr19 48102014 48102024 HOXC10 JASPAR yes 113645044
chr19 48102014 48102024 HOXD11 JASPAR yes 113645045
chr19 48102019 48102033 SPI1 JASPAR yes 70863858
chr19 48102019 48102033 SPIC JASPAR yes 70863859
chr19 48102019 48102033 SPI1 JASPAR yes 113645046
chr19 48102019 48102033 SPIC JASPAR yes 113645047
chr19 48102037 48102041 NFE TRANSFAC yes 70863860
chr19 48102037 48102041 NFE TRANSFAC yes 113645048
chr19 48102062 48102075 ZBTB18 JASPAR yes 70863861
chr19 48102062 48102075 ZBTB18 JASPAR yes 113645049
chr19 48102063 48102075 PKNOX1 JASPAR yes 70863862
chr19 48102063 48102075 TGIF1 JASPAR yes 70863863
chr19 48102063 48102075 PKNOX1 JASPAR yes 113645050
chr19 48102063 48102075 TGIF1 JASPAR yes 113645051
chr19 48102064 48102073 SNAI2 JASPAR yes 70863864
chr19 48102064 48102073 SNAI2 JASPAR yes 113645052
chr19 48102064 48102074 FIGLA JASPAR yes 70863865
chr19 48102064 48102074 ID4 JASPAR yes 70863866
chr19 48102064 48102074 TCF3 JASPAR yes 70863867
chr19 48102064 48102074 TCF4 JASPAR yes 70863868
chr19 48102064 48102074 FIGLA JASPAR yes 113645053
chr19 48102064 48102074 ID4 JASPAR yes 113645054
chr19 48102064 48102074 TCF3 JASPAR yes 113645055
chr19 48102064 48102074 TCF4 JASPAR yes 113645056
chr19 48102066 48102075 ZEB1 JASPAR yes 70863869
chr19 48102066 48102075 ZEB1 JASPAR yes 113645057
chr19 48102066 48102076 TBX21 JASPAR yes 70863870
chr19 48102066 48102076 TBX21 JASPAR yes 113645058
chr19 48102067 48102075 MGA JASPAR yes 70863871
chr19 48102067 48102075 TBX15 JASPAR yes 70863872
chr19 48102067 48102075 TBX1 JASPAR yes 70863873
chr19 48102067 48102075 TBX4 JASPAR yes 70863874
chr19 48102067 48102075 TBX5 JASPAR yes 70863875
chr19 48102067 48102075 MGA JASPAR yes 113645059
chr19 48102067 48102075 TBX15 JASPAR yes 113645060
chr19 48102067 48102075 TBX1 JASPAR yes 113645061
chr19 48102067 48102075 TBX4 JASPAR yes 113645062
chr19 48102067 48102075 TBX5 JASPAR yes 113645063
chr19 48102067 48102077 TBR1 JASPAR yes 70863876
chr19 48102067 48102077 TBR1 JASPAR yes 113645064
chr19 48102067 48102080 SMAD2 JASPAR yes 70863877
chr19 48102067 48102080 SMAD2 JASPAR yes 113645065
chr19 48102071 48102082 FOSL2 JASPAR yes 70863878
chr19 48102071 48102082 FOSL2 JASPAR yes 113645066
SNP sites on vista29709[chr19:48101913-48102072]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29709[chr19:48101913-48102072]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 47990894 48018497 - NAPA ENSG00000105402.3 48018497 0.71 1.0 17760 16584
chr19 48023942 48059113 - ZNF541 ENSG00000118156.8 48059113 0.9 0.97 17761 57200
chr19 48111453 48206533 + GLTSCR1 ENSG00000063169.6 48111453 0.68 1.0 17762 90619
Expression level of Genes
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miRNAs possibly regulated by vista29709[chr19:48101913-48102072]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results