EnhancerDB
  1. Home
  2. Enhancers
  3. vista29716[chr19:48226445-48226596]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29716[chr19:48226445-48226596]
Back to top
Tissue distribution of vista29716
Back to top
Transcription factor that possibly regulate vista29716[chr19:48226445-48226596]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 48226429 48226449 ESR1 JASPAR yes 70864209
chr19 48226429 48226449 ESR1 JASPAR yes 113655482
chr19 48226444 48226454 SREBF1 JASPAR yes 70864210
chr19 48226444 48226454 SREBF1 JASPAR yes 113655484
chr19 48226450 48226462 TGIF1 JASPAR yes 70864211
chr19 48226450 48226462 TGIF1 JASPAR yes 113655485
chr19 48226464 48226470 SOX10 JASPAR yes 70864212
chr19 48226464 48226470 SOX10 JASPAR yes 113655486
chr19 48226465 48226480 STAT2 JASPAR yes 70864213
chr19 48226465 48226480 STAT2 JASPAR yes 113655487
chr19 48226501 48226513 ZBTB7A JASPAR yes 70864214
chr19 48226501 48226513 ZBTB7A JASPAR yes 113655488
chr19 48226502 48226514 GLI2 JASPAR yes 70864215
chr19 48226502 48226514 GLI2 JASPAR yes 113655489
chr19 48226522 48226534 HNF1B JASPAR yes 70864216
chr19 48226522 48226534 HNF1B JASPAR yes 113655490
chr19 48226525 48226540 JUND JASPAR yes 70864217
chr19 48226525 48226540 JUND JASPAR yes 113655491
chr19 48226527 48226541 ATF7 JASPAR yes 70864218
chr19 48226527 48226541 BATF3 JASPAR yes 70864219
chr19 48226527 48226541 ATF7 JASPAR yes 113655492
chr19 48226527 48226541 BATF3 JASPAR yes 113655493
chr19 48226528 48226540 JDP2 JASPAR yes 70864220
chr19 48226528 48226540 JDP2 JASPAR yes 113655494
chr19 48226528 48226543 JUND JASPAR yes 70864221
chr19 48226528 48226543 JUND JASPAR yes 113655495
chr19 48226529 48226542 JUN JASPAR yes 70864222
chr19 48226529 48226542 JUN JASPAR yes 113655496
chr19 48226530 48226537 JUN TRANSFAC yes 70864223
chr19 48226530 48226537 JUN TRANSFAC yes 113655497
chr19 48226580 48226586 TBP TRANSFAC yes 70864224
chr19 48226580 48226586 TBP TRANSFAC yes 113655498
chr19 48226585 48226601 SOX4 JASPAR yes 70864225
chr19 48226585 48226601 SOX4 JASPAR yes 113655499
chr19 48226586 48226601 SOX21 JASPAR yes 70864226
chr19 48226586 48226601 SOX21 JASPAR yes 113655500
SNP sites on vista29716[chr19:48226445-48226596]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29716[chr19:48226445-48226596]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 48216600 48246391 + EHD2 ENSG00000024422.7 48216600 0.77 1.0 17763 90155
chr19 48248779 48260315 + GLTSCR2 ENSG00000105373.14 48248779 0.78 1.0 17764 77817
chr19 48281829 48287943 + SEPW1 ENSG00000178980.10 48281829 0.71 1.0 17765 44767
chr19 48304500 48322308 - TPRX1 ENSG00000178928.4 48322308 0.98 1.0 17766 4288
chr19 48322703 48346587 + CRX ENSG00000105392.11 48322703 0.93 0.0 17767 3893
Expression level of Genes
Back to top
miRNAs possibly regulated by vista29716[chr19:48226445-48226596]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results