EnhancerDB
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  3. vista29718[chr19:48293591-48293754]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29718[chr19:48293591-48293754]
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Tissue distribution of vista29718
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Transcription factor that possibly regulate vista29718[chr19:48293591-48293754]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 48293592 48294197 CTCF UCSC Txn Factor no Conserved 108420935
chr19 48293696 48293948 RAD21 UCSC Txn Factor no Conserved 108420951
chr19 48293614 48293620 TCF4 TRANSFAC yes 70864253
chr19 48293614 48293620 TCF4 TRANSFAC yes 113659330
chr19 48293622 48293627 GATA2 JASPAR yes 70864254
chr19 48293622 48293627 GATA2 JASPAR yes 113659331
chr19 48293630 48293651 ZNF263 JASPAR yes 70864255
chr19 48293630 48293651 ZNF263 JASPAR yes 113659332
chr19 48293634 48293638 NFE TRANSFAC yes 70864256
chr19 48293634 48293638 NFE TRANSFAC yes 113659333
chr19 48293637 48293647 SP1 JASPAR yes 70864257
chr19 48293637 48293647 SP1 JASPAR yes 113659334
chr19 48293638 48293644 SP1 TRANSFAC yes 70864258
chr19 48293638 48293644 SP1 TRANSFAC yes 113659335
chr19 48293638 48293648 SP1 JASPAR yes 70864259
chr19 48293638 48293648 SP1 JASPAR yes 113659336
chr19 48293639 48293646 SP1 TRANSFAC yes 70864260
chr19 48293639 48293646 SP1 TRANSFAC yes 113659337
chr19 48293640 48293645 SP1 TRANSFAC yes 70864261
chr19 48293640 48293645 SP1 TRANSFAC yes 113659338
chr19 48293640 48293646 SP1 TRANSFAC yes 70864262
chr19 48293640 48293646 SP1 TRANSFAC yes 113659339
chr19 48293640 48293647 SP1 TRANSFAC yes 70864263
chr19 48293640 48293647 SP1 TRANSFAC yes 113659340
chr19 48293641 48293656 NR2C2 JASPAR yes 70864264
chr19 48293641 48293656 NR2C2 JASPAR yes 113659341
chr19 48293642 48293652 SP1 TRANSFAC yes 70864265
chr19 48293642 48293652 SP1 TRANSFAC yes 113659342
chr19 48293643 48293653 SP1 JASPAR yes 70864266
chr19 48293643 48293653 SP1 JASPAR yes 113659343
chr19 48293644 48293650 SP1 TRANSFAC yes 70864267
chr19 48293644 48293650 SP1 TRANSFAC yes 113659344
chr19 48293644 48293654 SP1 JASPAR yes 70864268
chr19 48293644 48293654 SP1 JASPAR yes 113659345
chr19 48293660 48293664 NFE TRANSFAC yes 70864269
chr19 48293660 48293664 NFE TRANSFAC yes 113659346
chr19 48293741 48293751 MYF6 JASPAR yes 70864270
chr19 48293741 48293751 MYF6 JASPAR yes 113659347
chr19 48293745 48293756 DMRT3 JASPAR yes 70864271
chr19 48293745 48293756 DMRT3 JASPAR yes 113659348
SNP sites on vista29718[chr19:48293591-48293754]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29718[chr19:48293591-48293754]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 48216600 48246391 + EHD2 ENSG00000024422.7 48216600 0.77 1.0 17763 23009
chr19 48248779 48260315 + GLTSCR2 ENSG00000105373.14 48248779 0.78 1.0 17764 55188
chr19 48281829 48287943 + SEPW1 ENSG00000178980.10 48281829 0.71 1.0 17765 88238
chr19 48304500 48322308 - TPRX1 ENSG00000178928.4 48322308 0.98 1.0 17766 71446
chr19 48322703 48346587 + CRX ENSG00000105392.11 48322703 0.93 0.0 17767 71051
chr19 48337701 48364769 + TPRX2P ENSG00000259009.3 48337701 1.0 0.0 17768 56053
chr19 48373723 48389654 - SULT2A1 ENSG00000105398.3 48389654 0.99 1.0 17769 4100
Expression level of Genes
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miRNAs possibly regulated by vista29718[chr19:48293591-48293754]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results