EnhancerDB
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  3. vista29722[chr19:48352522-48352636]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29722[chr19:48352522-48352636]
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Tissue distribution of vista29722
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Transcription factor that possibly regulate vista29722[chr19:48352522-48352636]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 48352224 48352764 CTCF UCSC Txn Factor no Conserved 108420985
chr19 48352511 48352525 RXRB JASPAR yes 70864371
chr19 48352511 48352525 RXRG JASPAR yes 70864372
chr19 48352511 48352525 RXRB JASPAR yes 113660223
chr19 48352511 48352525 RXRG JASPAR yes 113660224
chr19 48352514 48352526 HNF1B JASPAR yes 70864373
chr19 48352514 48352526 HNF1B JASPAR yes 113660225
chr19 48352517 48352531 TCF7L2 JASPAR yes 70864374
chr19 48352517 48352531 TCF7L2 JASPAR yes 113660226
chr19 48352517 48352532 LEF1 JASPAR yes 70864375
chr19 48352517 48352532 LEF1 JASPAR yes 113660227
chr19 48352533 48352544 E2F6 JASPAR yes 70864376
chr19 48352533 48352544 E2F6 JASPAR yes 113660228
chr19 48352537 48352542 ETS2 TRANSFAC yes 70864377
chr19 48352537 48352542 ETS2 TRANSFAC yes 113660229
chr19 48352553 48352568 TFAP2A JASPAR yes 70864378
chr19 48352553 48352568 TFAP2C JASPAR yes 70864379
chr19 48352553 48352568 TFAP2A JASPAR yes 113660230
chr19 48352553 48352568 TFAP2C JASPAR yes 113660231
chr19 48352554 48352565 TFAP2A JASPAR yes 70864380
chr19 48352554 48352565 TFAP2A JASPAR yes 113660232
chr19 48352555 48352564 TFAP2A JASPAR yes 70864381
chr19 48352555 48352564 TFAP2A JASPAR yes 113660233
chr19 48352562 48352566 ESR1 TRANSFAC yes 70864382
chr19 48352562 48352566 ESR1 TRANSFAC yes 113660234
chr19 48352566 48352575 RUNX2 JASPAR yes 70864383
chr19 48352566 48352575 RUNX2 JASPAR yes 113660235
chr19 48352566 48352585 CTCF JASPAR yes 70864384
chr19 48352566 48352585 CTCF JASPAR yes 113660236
chr19 48352567 48352581 ZIC1 JASPAR yes 70864385
chr19 48352567 48352581 ZIC1 JASPAR yes 113660237
chr19 48352579 48352591 NHLH1 JASPAR yes 70864386
chr19 48352579 48352591 NHLH1 JASPAR yes 113660238
chr19 48352597 48352600 MYB TRANSFAC yes 70864387
chr19 48352597 48352600 MYB TRANSFAC yes 113660239
chr19 48352609 48352623 POU4F1 JASPAR yes 70864388
chr19 48352609 48352623 POU4F1 JASPAR yes 113660240
chr19 48352611 48352627 POU4F3 JASPAR yes 70864389
chr19 48352611 48352627 POU4F3 JASPAR yes 113660241
chr19 48352612 48352627 FOXA1 JASPAR yes 70864390
chr19 48352612 48352627 FOXA1 JASPAR yes 113660242
chr19 48352613 48352625 FOXI1 JASPAR yes 70864391
chr19 48352613 48352625 FOXI1 JASPAR yes 113660243
chr19 48352613 48352627 POU4F1 JASPAR yes 70864392
chr19 48352613 48352627 POU4F1 JASPAR yes 113660244
chr19 48352613 48352628 FOXP1 JASPAR yes 70864393
chr19 48352613 48352628 HNF1A JASPAR yes 70864394
chr19 48352613 48352628 FOXP1 JASPAR yes 113660245
chr19 48352613 48352628 HNF1A JASPAR yes 113660246
chr19 48352614 48352626 FOXC2 JASPAR yes 70864395
chr19 48352614 48352626 FOXC2 JASPAR yes 113660247
chr19 48352614 48352628 ONECUT2 JASPAR yes 70864396
chr19 48352614 48352628 ONECUT3 JASPAR yes 70864397
chr19 48352614 48352628 ONECUT2 JASPAR yes 113660248
chr19 48352614 48352628 ONECUT3 JASPAR yes 113660249
chr19 48352615 48352626 FOXB1 JASPAR yes 70864398
chr19 48352615 48352626 FOXC1 JASPAR yes 70864399
chr19 48352615 48352626 PROP1 JASPAR yes 70864400
chr19 48352615 48352626 FOXB1 JASPAR yes 113660250
chr19 48352615 48352626 FOXC1 JASPAR yes 113660251
chr19 48352615 48352626 PROP1 JASPAR yes 113660252
chr19 48352616 48352620 YY1 TRANSFAC yes 70864401
chr19 48352616 48352620 YY1 TRANSFAC yes 113660253
chr19 48352616 48352631 FOXA1 JASPAR yes 70864402
chr19 48352616 48352631 FOXA1 JASPAR yes 113660254
chr19 48352617 48352629 FOXI1 JASPAR yes 70864403
chr19 48352617 48352629 FOXI1 JASPAR yes 113660255
chr19 48352617 48352632 FOXP1 JASPAR yes 70864404
chr19 48352617 48352632 FOXP1 JASPAR yes 113660256
chr19 48352618 48352630 FOXC2 JASPAR yes 70864405
chr19 48352618 48352630 FOXC2 JASPAR yes 113660257
chr19 48352618 48352632 ONECUT2 JASPAR yes 70864406
chr19 48352618 48352632 ONECUT3 JASPAR yes 70864407
chr19 48352618 48352632 ONECUT2 JASPAR yes 113660258
chr19 48352618 48352632 ONECUT3 JASPAR yes 113660259
chr19 48352619 48352630 FOXB1 JASPAR yes 70864408
chr19 48352619 48352630 FOXC1 JASPAR yes 70864409
chr19 48352619 48352630 FOXB1 JASPAR yes 113660260
chr19 48352619 48352630 FOXC1 JASPAR yes 113660261
chr19 48352620 48352624 YY1 TRANSFAC yes 70864410
chr19 48352620 48352624 YY1 TRANSFAC yes 113660262
chr19 48352622 48352634 FOXC2 JASPAR yes 70864411
chr19 48352622 48352634 FOXC2 JASPAR yes 113660263
chr19 48352624 48352628 YY1 TRANSFAC yes 70864412
chr19 48352624 48352628 YY1 TRANSFAC yes 113660264
chr19 48352636 48352648 PROX1 JASPAR yes 70864413
chr19 48352636 48352648 PROX1 JASPAR yes 113660265
SNP sites on vista29722[chr19:48352522-48352636]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29722[chr19:48352522-48352636]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 48281829 48287943 + SEPW1 ENSG00000178980.10 48281829 0.71 1.0 17765 29307
chr19 48304500 48322308 - TPRX1 ENSG00000178928.4 48322308 0.98 1.0 17766 69786
chr19 48322703 48346587 + CRX ENSG00000105392.11 48322703 0.93 0.0 17767 70181
chr19 48337701 48364769 + TPRX2P ENSG00000259009.3 48337701 1.0 0.0 17768 85179
chr19 48373723 48389654 - SULT2A1 ENSG00000105398.3 48389654 0.99 1.0 17769 62982
Expression level of Genes
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miRNAs possibly regulated by vista29722[chr19:48352522-48352636]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results