EnhancerDB
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  3. vista2974[chr1:112901525-112901779]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2974[chr1:112901525-112901779]
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Tissue distribution of vista2974
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Transcription factor that possibly regulate vista2974[chr1:112901525-112901779]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 112901413 112902006 CTCF UCSC Txn Factor no Conserved 107822690
chr1 112901460 112901728 RAD21 UCSC Txn Factor no Conserved 107822698
chr1 112901507 112901525 TP53 JASPAR yes 31567535
chr1 112901507 112901525 TP63 JASPAR yes 31567536
chr1 112901507 112901525 TP73 JASPAR yes 31567537
chr1 112901507 112901525 TP53 JASPAR yes 118352851
chr1 112901507 112901525 TP63 JASPAR yes 118352852
chr1 112901507 112901525 TP73 JASPAR yes 118352853
chr1 112901525 112901531 MZF1 JASPAR yes 31567540
chr1 112901525 112901531 MZF1 JASPAR yes 118352854
chr1 112901529 112901533 YY1 TRANSFAC yes 31567541
chr1 112901529 112901533 YY1 TRANSFAC yes 118352855
chr1 112901587 112901606 CTCF JASPAR yes 31567542
chr1 112901587 112901606 CTCF JASPAR yes 118352856
chr1 112901598 112901611 SMAD2 JASPAR yes 31567543
chr1 112901598 112901611 SMAD2 JASPAR yes 118352857
chr1 112901632 112901643 GCM1 JASPAR yes 31567544
chr1 112901632 112901643 GCM1 JASPAR yes 118352858
chr1 112901659 112901669 SP1 JASPAR yes 31567545
chr1 112901659 112901669 SP1 JASPAR yes 118352859
chr1 112901660 112901670 SP1 JASPAR yes 31567546
chr1 112901660 112901670 SP1 JASPAR yes 118352860
chr1 112901679 112901700 ZNF263 JASPAR yes 31567547
chr1 112901679 112901700 ZNF263 JASPAR yes 118352861
chr1 112901693 112901708 LEF1 JASPAR yes 31567548
chr1 112901693 112901708 LEF1 JASPAR yes 118352862
chr1 112901695 112901712 RXRA JASPAR yes 31567549
chr1 112901695 112901712 RXRA JASPAR yes 118352863
chr1 112901696 112901709 ELF1 JASPAR yes 31567550
chr1 112901696 112901709 ELF1 JASPAR yes 118352864
chr1 112901700 112901705 ETS2 TRANSFAC yes 31567551
chr1 112901700 112901705 ETS2 TRANSFAC yes 118352865
chr1 112901718 112901723 SP1 TRANSFAC yes 31567552
chr1 112901718 112901723 SP1 TRANSFAC yes 118352866
chr1 112901733 112901739 GATA1 TRANSFAC yes 31567553
chr1 112901733 112901739 GATA1 TRANSFAC yes 118352867
chr1 112901733 112901741 GATA5 JASPAR yes 31567554
chr1 112901733 112901741 GATA5 JASPAR yes 118352868
chr1 112901740 112901750 REL JASPAR yes 31567555
chr1 112901740 112901750 REL JASPAR yes 118352869
chr1 112901749 112901755 NFE2 TRANSFAC yes 31567556
chr1 112901749 112901755 NFE2 TRANSFAC yes 118352870
chr1 112901760 112901775 NR2C2 JASPAR yes 31567557
chr1 112901760 112901775 NR2C2 JASPAR yes 118352871
SNP sites on vista2974[chr1:112901525-112901779]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 112901542 rs149110553 C T
CTCF RAD21
563694
chr1 112901635 rs115232193 A T
CTCF GCM1 RAD21
563695
chr1 112901657 rs558314857 G A
CTCF RAD21
563696
chr1 112901671 rs116679498 G A
CTCF RAD21
563697
chr1 112901750 rs17030125 C T
CTCF NFE2 REL
563698
chr1 112901766 rs72980186 G A
CTCF NR2C2
563699
Genes possibly regulated by vista2974[chr1:112901525-112901779]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 112938803 113006078 + CTTNBP2NL ENSG00000143079.10 112938803 0.79 1.0 1022 62976
Expression level of Genes
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miRNAs possibly regulated by vista2974[chr1:112901525-112901779]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results