EnhancerDB
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  3. vista29741[chr19:48927915-48927964]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29741[chr19:48927915-48927964]
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Tissue distribution of vista29741
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Transcription factor that possibly regulate vista29741[chr19:48927915-48927964]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 48927910 48927922 POU2F1 JASPAR yes 70865336
chr19 48927910 48927922 POU2F1 JASPAR yes 113677182
chr19 48927912 48927920 FOXL1 JASPAR yes 70865337
chr19 48927912 48927920 FOXL1 JASPAR yes 113677183
chr19 48927913 48927924 NFIL3 JASPAR yes 70865338
chr19 48927913 48927924 NFIL3 JASPAR yes 113677184
chr19 48927927 48927933 MZF1 JASPAR yes 70865339
chr19 48927927 48927933 MZF1 JASPAR yes 113677185
chr19 48927937 48927941 NFE TRANSFAC yes 70865340
chr19 48927937 48927941 NFE TRANSFAC yes 113677186
chr19 48927937 48927952 LEF1 JASPAR yes 70865341
chr19 48927937 48927952 LEF1 JASPAR yes 113677187
chr19 48927938 48927952 TCF7L2 JASPAR yes 70865342
chr19 48927938 48927952 TCF7L2 JASPAR yes 113677188
chr19 48927941 48927947 LEF1 TRANSFAC yes 70865343
chr19 48927941 48927947 TCF4 TRANSFAC yes 70865344
chr19 48927941 48927947 LEF1 TRANSFAC yes 113677189
chr19 48927941 48927947 TCF4 TRANSFAC yes 113677190
chr19 48927956 48927960 YY1 TRANSFAC yes 70865345
chr19 48927956 48927960 YY1 TRANSFAC yes 113677191
SNP sites on vista29741[chr19:48927915-48927964]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29741[chr19:48927915-48927964]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 48835613 48867494 - TMEM143 ENSG00000161558.6 48867494 0.63 1.0 17780 39579
chr19 48867652 48879633 + SYNGR4 ENSG00000105467.4 48867652 0.97 0.96 17781 39737
chr19 48885827 48894810 - KDELR1 ENSG00000105438.4 48894810 0.67 1.0 17782 66895
chr19 48898132 48948188 + GRIN2D ENSG00000105464.3 48898132 0.88 1.0 17783 70217
chr19 48949030 48960279 + GRWD1 ENSG00000105447.8 48949030 0.84 0.99 17784 78934
chr19 48958766 48969367 + KCNJ14 ENSG00000182324.5 48958766 0.75 1.0 17785 69198
chr19 48969094 48975688 + CTC-273B12.7 ENSG00000268465.1 48969094 1.0 0.97 17786 58870
chr19 48972289 48985571 + CYTH2 ENSG00000105443.9 48972289 0.76 1.0 17787 55675
chr19 48988528 49016446 - LMTK3 ENSG00000142235.4 49016446 0.87 1.0 17788 11518
Expression level of Genes
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miRNAs possibly regulated by vista29741[chr19:48927915-48927964]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results