EnhancerDB
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  3. vista29772[chr19:50004159-50004640]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29772[chr19:50004159-50004640]
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Tissue distribution of vista29772
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Transcription factor that possibly regulate vista29772[chr19:50004159-50004640]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 50002035 50004641 POLR2A UCSC Txn Factor no Conserved 108423455
chr19 50004164 50004178 PLAG1 JASPAR yes 70866929
chr19 50004193 50004212 REST JASPAR yes 70866930
chr19 50004196 50004200 H4TF2 TRANSFAC yes 70866931
chr19 50004202 50004208 MAZ TRANSFAC yes 70866932
chr19 50004204 50004213 HiNF-C TRANSFAC yes 70866933
chr19 50004204 50004214 SP1 JASPAR yes 70866934
chr19 50004205 50004211 SP1 TRANSFAC yes 70866935
chr19 50004206 50004211 SP1 TRANSFAC yes 70866936
chr19 50004207 50004212 SP1 TRANSFAC yes 70866937
chr19 50004207 50004213 SP1 TRANSFAC yes 70866938
chr19 50004220 50004233 ELF1 JASPAR yes 70866939
chr19 50004223 50004230 SPIB JASPAR yes 70866940
chr19 50004223 50004233 ETV6 JASPAR yes 70866941
chr19 50004223 50004233 GABPA JASPAR yes 70866942
chr19 50004223 50004234 ELK4 JASPAR yes 70866943
chr19 50004223 50004234 FLI1 JASPAR yes 70866944
chr19 50004224 50004232 EHF JASPAR yes 70866945
chr19 50004225 50004232 SPI1 JASPAR yes 70866946
chr19 50004232 50004237 SP1 TRANSFAC yes 70866947
chr19 50004236 50004250 TCF7L2 JASPAR yes 70866948
chr19 50004247 50004268 ZNF263 JASPAR yes 70866949
chr19 50004248 50004252 LFA1 TRANSFAC yes 70866950
chr19 50004248 50004268 TP63 JASPAR yes 70866951
chr19 50004250 50004261 FLI1 JASPAR yes 70866952
chr19 50004251 50004259 EHF JASPAR yes 70866953
chr19 50004257 50004267 SP1 JASPAR yes 70866954
chr19 50004257 50004274 RXRA JASPAR yes 70866955
chr19 50004257 50004278 ZNF263 JASPAR yes 70866956
chr19 50004258 50004262 LFA1 TRANSFAC yes 70866957
chr19 50004319 50004333 GLIS2 JASPAR yes 70866958
chr19 50004328 50004332 LFA1 TRANSFAC yes 70866959
chr19 50004348 50004369 ZNF263 JASPAR yes 70866960
chr19 50004349 50004353 LFA1 TRANSFAC yes 70866961
chr19 50004363 50004374 FOXH1 JASPAR yes 70866962
chr19 50004365 50004384 CTCF JASPAR yes 70866963
chr19 50004374 50004382 SP1 TRANSFAC yes 70866964
chr19 50004374 50004384 SP1 JASPAR yes 70866965
chr19 50004376 50004382 MAZ TRANSFAC yes 70866966
chr19 50004378 50004396 ESR2 JASPAR yes 70866967
chr19 50004379 50004394 ESR2 JASPAR yes 70866968
chr19 50004380 50004390 SP1 JASPAR yes 70866969
chr19 50004387 50004401 PLAG1 JASPAR yes 70866970
chr19 50004415 50004425 SP1 TRANSFAC yes 70866971
chr19 50004416 50004426 SP1 JASPAR yes 70866972
chr19 50004417 50004423 SP1 TRANSFAC yes 70866973
chr19 50004417 50004427 SP1 JASPAR yes 70866974
chr19 50004417 50004427 SP1 TRANSFAC yes 70866975
chr19 50004421 50004433 TFAP2A JASPAR yes 70866976
chr19 50004430 50004442 NHLH1 JASPAR yes 70866977
chr19 50004431 50004440 SNAI2 JASPAR yes 70866978
chr19 50004431 50004441 FIGLA JASPAR yes 70866979
chr19 50004431 50004441 ID4 JASPAR yes 70866980
chr19 50004431 50004441 NHLH1 JASPAR yes 70866981
chr19 50004431 50004441 TCF3 JASPAR yes 70866982
chr19 50004431 50004441 TCF4 JASPAR yes 70866983
chr19 50004437 50004447 NFATC3 JASPAR yes 70866984
chr19 50004437 50004448 ETV2 JASPAR yes 70866985
chr19 50004439 50004445 ETS1 JASPAR yes 70866986
chr19 50004449 50004454 SP1 TRANSFAC yes 70866987
chr19 50004459 50004474 FOXP1 JASPAR yes 70866988
chr19 50004460 50004471 FOXP2 JASPAR yes 70866989
chr19 50004461 50004469 FOXD1 JASPAR yes 70866990
chr19 50004461 50004469 FOXG1 JASPAR yes 70866991
chr19 50004461 50004469 FOXO3 JASPAR yes 70866992
chr19 50004462 50004469 FOXD2 JASPAR yes 70866993
chr19 50004462 50004469 FOXI1 JASPAR yes 70866994
chr19 50004462 50004469 FOXL1 JASPAR yes 70866995
chr19 50004462 50004469 FOXO4 JASPAR yes 70866996
chr19 50004462 50004469 FOXO6 JASPAR yes 70866997
chr19 50004462 50004469 FOXP3 JASPAR yes 70866998
chr19 50004462 50004470 FOXO3 JASPAR yes 70866999
chr19 50004507 50004518 NFKB1 JASPAR yes 70867000
chr19 50004507 50004526 RFX2 JASPAR yes 70867001
chr19 50004511 50004527 RFX3 JASPAR yes 70867002
chr19 50004511 50004527 RFX4 JASPAR yes 70867003
chr19 50004511 50004527 RFX5 JASPAR yes 70867004
chr19 50004513 50004527 PLAG1 JASPAR yes 70867005
chr19 50004516 50004526 NFIA JASPAR yes 70867006
chr19 50004517 50004526 NFIX JASPAR yes 70867007
chr19 50004518 50004524 NFIC JASPAR yes 70867008
chr19 50004528 50004538 SREBF1 JASPAR yes 70867009
chr19 50004528 50004538 SREBF2 JASPAR yes 70867010
chr19 50004529 50004544 ZIC3 JASPAR yes 70867011
chr19 50004531 50004536 ATF1 TRANSFAC yes 70867012
chr19 50004533 50004543 SREBF2 JASPAR yes 70867013
chr19 50004541 50004555 NR2F1 JASPAR yes 70867014
chr19 50004547 50004555 CREB1 JASPAR yes 70867015
chr19 50004547 50004562 NR2C2 JASPAR yes 70867016
chr19 50004548 50004562 RXRG JASPAR yes 70867017
chr19 50004550 50004554 ESR1 TRANSFAC yes 70867018
chr19 50004565 50004570 TFAP2A TRANSFAC yes 70867019
chr19 50004565 50004571 MZF1 JASPAR yes 70867020
chr19 50004567 50004572 ETS2 TRANSFAC yes 70867021
chr19 50004572 50004589 RARA JASPAR yes 70867022
chr19 50004596 50004602 TCF4 TRANSFAC yes 70867023
chr19 50004597 50004611 SPI1 JASPAR yes 70867024
chr19 50004632 50004639 MEIS1 JASPAR yes 70867025
chr19 50004632 50004640 MEIS2 JASPAR yes 70867026
chr19 50004632 50004640 MEIS3 JASPAR yes 70867027
SNP sites on vista29772[chr19:50004159-50004640]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29772[chr19:50004159-50004640]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 49925671 49926698 - PTH2 ENSG00000142538.1 49926698 0.0 1.0 17835 22539
chr19 49927006 49932075 + CTD-3148I10.1 ENSG00000261949.1 49927006 0.87 1.0 17836 22847
chr19 49932658 49945617 - SLC17A7 ENSG00000104888.5 49945617 0.83 1.0 17837 41458
chr19 49949555 49956754 - PIH1D1 ENSG00000104872.6 49956754 0.62 1.0 17838 52595
chr19 49956426 49974305 + ALDH16A1 ENSG00000161618.5 49956426 0.7 1.0 17839 52267
chr19 49966009 49989488 + CTD-3148I10.9 ENSG00000269469.1 49966009 0.99 1.0 17840 61850
chr19 49977464 49989488 + FLT3LG ENSG00000090554.8 49977464 0.85 0.69 17841 73305
chr19 49990811 49995565 + RPL13A ENSG00000142541.12 49990811 0.75 1.0 17842 86652
chr19 49999622 50002946 + RPS11 ENSG00000142534.2 49999622 0.75 1.0 17843 95463
chr19 50003781 50004614 + hsa-mir-150 ENSG00000268000.1 50003781 0.92 0.98 17844 99622
chr19 50010073 50029590 + FCGRT ENSG00000104870.8 50010073 0.69 0.94 17845 94567
chr19 50030875 50050219 + RCN3 ENSG00000142552.3 50030875 0.86 0.9 17846 73765
chr19 50058968 50093519 - NOSIP ENSG00000142546.9 50093519 0.78 1.0 17847 11121
chr19 50083903 50094272 + PRRG2 ENSG00000126460.6 50083903 0.88 1.0 17848 20737
chr19 50094900 50129696 + PRR12 ENSG00000126464.9 50094900 0.69 1.0 17849 9740
Expression level of Genes
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miRNAs possibly regulated by vista29772[chr19:50004159-50004640]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 50004054 50004075 - hsa-miR-150-3p MIMAT0004610 50004160 0.0682261208576998 0.952371 0.676023 861
Expression level of miRNAs
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