EnhancerDB
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  3. vista29780[chr19:50276330-50276635]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29780[chr19:50276330-50276635]
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Tissue distribution of vista29780
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Transcription factor that possibly regulate vista29780[chr19:50276330-50276635]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 50276323 50276334 ESRRA JASPAR yes 70867458
chr19 50276323 50276334 ESRRA JASPAR yes 113729841
chr19 50276327 50276331 LFA1 TRANSFAC yes 70867459
chr19 50276327 50276331 LFA1 TRANSFAC yes 113729842
chr19 50276334 50276348 PLAG1 JASPAR yes 70867460
chr19 50276334 50276348 PLAG1 JASPAR yes 113729843
chr19 50276340 50276350 MZF1 JASPAR yes 70867461
chr19 50276340 50276350 MZF1 JASPAR yes 113729844
chr19 50276343 50276348 TFAP2A TRANSFAC yes 70867462
chr19 50276343 50276348 TFAP2A TRANSFAC yes 113729845
chr19 50276343 50276349 MZF1 JASPAR yes 70867463
chr19 50276343 50276349 MZF1 JASPAR yes 113729846
chr19 50276345 50276350 ETS2 TRANSFAC yes 70867464
chr19 50276345 50276350 ETS2 TRANSFAC yes 113729847
chr19 50276346 50276361 HSF1 JASPAR yes 70867465
chr19 50276346 50276361 HSF1 JASPAR yes 113729848
chr19 50276347 50276360 HSF1 JASPAR yes 70867466
chr19 50276347 50276360 HSF2 JASPAR yes 70867467
chr19 50276347 50276360 HSF4 JASPAR yes 70867468
chr19 50276347 50276360 HSF1 JASPAR yes 113729849
chr19 50276347 50276360 HSF2 JASPAR yes 113729850
chr19 50276347 50276360 HSF4 JASPAR yes 113729851
chr19 50276356 50276371 PRDM1 JASPAR yes 70867469
chr19 50276356 50276371 PRDM1 JASPAR yes 113729852
chr19 50276359 50276372 SMAD2 JASPAR yes 70867470
chr19 50276359 50276372 SMAD2 JASPAR yes 113729853
chr19 50276376 50276397 ZNF263 JASPAR yes 70867471
chr19 50276376 50276397 ZNF263 JASPAR yes 113729854
chr19 50276382 50276386 LFA1 TRANSFAC yes 70867472
chr19 50276382 50276386 LFA1 TRANSFAC yes 113729855
chr19 50276387 50276393 MAZ TRANSFAC yes 70867473
chr19 50276387 50276393 MAZ TRANSFAC yes 113729856
chr19 50276391 50276395 LFA1 TRANSFAC yes 70867474
chr19 50276391 50276395 LFA1 TRANSFAC yes 113729857
chr19 50276402 50276416 GATA2 JASPAR yes 70867475
chr19 50276402 50276416 GATA2 JASPAR yes 113729858
chr19 50276404 50276412 GATA3 JASPAR yes 70867476
chr19 50276404 50276412 GATA5 JASPAR yes 70867477
chr19 50276404 50276412 GATA3 JASPAR yes 113729859
chr19 50276404 50276412 GATA5 JASPAR yes 113729860
chr19 50276404 50276425 ZNF263 JASPAR yes 70867478
chr19 50276404 50276425 ZNF263 JASPAR yes 113729861
chr19 50276407 50276428 ZNF263 JASPAR yes 70867479
chr19 50276407 50276428 ZNF263 JASPAR yes 113729862
chr19 50276410 50276420 MZF1 JASPAR yes 70867480
chr19 50276410 50276420 MZF1 JASPAR yes 113729863
chr19 50276411 50276426 NR2C2 JASPAR yes 70867481
chr19 50276411 50276426 NR2C2 JASPAR yes 113729864
chr19 50276411 50276429 RARA JASPAR yes 70867482
chr19 50276411 50276429 RARA JASPAR yes 113729865
chr19 50276434 50276449 TFAP2A JASPAR yes 70867483
chr19 50276434 50276449 TFAP2C JASPAR yes 70867484
chr19 50276434 50276449 TFAP2A JASPAR yes 113729866
chr19 50276434 50276449 TFAP2C JASPAR yes 113729867
chr19 50276437 50276449 TFAP2A JASPAR yes 70867485
chr19 50276437 50276449 TFAP2B JASPAR yes 70867486
chr19 50276437 50276449 TFAP2C JASPAR yes 70867487
chr19 50276437 50276449 TFAP2A JASPAR yes 113729868
chr19 50276437 50276449 TFAP2B JASPAR yes 113729869
chr19 50276437 50276449 TFAP2C JASPAR yes 113729870
chr19 50276438 50276447 TFAP2A JASPAR yes 70867488
chr19 50276438 50276447 TFAP2A JASPAR yes 113729871
chr19 50276444 50276464 TP63 JASPAR yes 70867489
chr19 50276444 50276464 TP63 JASPAR yes 113729872
chr19 50276445 50276463 TP73 JASPAR yes 70867490
chr19 50276445 50276463 TP73 JASPAR yes 113729873
chr19 50276453 50276457 NFE TRANSFAC yes 70867491
chr19 50276453 50276457 NFE TRANSFAC yes 113729874
chr19 50276458 50276462 NFE TRANSFAC yes 70867492
chr19 50276458 50276462 NFE TRANSFAC yes 113729875
chr19 50276518 50276526 GATA1 TRANSFAC yes 70867493
chr19 50276518 50276526 GATA1 TRANSFAC yes 113729876
chr19 50276521 50276525 NFE TRANSFAC yes 70867494
chr19 50276521 50276525 NFE TRANSFAC yes 113729877
chr19 50276521 50276526 GATA1 TRANSFAC yes 70867495
chr19 50276521 50276526 GATA1 TRANSFAC yes 113729878
chr19 50276521 50276527 GATA3 JASPAR yes 70867496
chr19 50276521 50276527 GATA3 JASPAR yes 113729879
chr19 50276567 50276582 NFYB JASPAR yes 70867497
chr19 50276567 50276582 NFYB JASPAR yes 113729880
chr19 50276569 50276585 NFYA JASPAR yes 70867498
chr19 50276569 50276585 NFYA JASPAR yes 113729881
chr19 50276570 50276588 NFYA JASPAR yes 70867499
chr19 50276570 50276588 NFYA JASPAR yes 113729882
chr19 50276574 50276578 H1TF2 TRANSFAC yes 70867500
chr19 50276574 50276578 NFE TRANSFAC yes 70867501
chr19 50276574 50276578 SRF TRANSFAC yes 70867502
chr19 50276574 50276578 H1TF2 TRANSFAC yes 113729883
chr19 50276574 50276578 NFE TRANSFAC yes 113729884
chr19 50276574 50276578 SRF TRANSFAC yes 113729885
chr19 50276579 50276589 SP1 JASPAR yes 70867503
chr19 50276579 50276589 SP1 JASPAR yes 113729886
chr19 50276588 50276602 MTF1 JASPAR yes 70867504
chr19 50276588 50276602 MTF1 JASPAR yes 113729887
chr19 50276594 50276608 MTF1 JASPAR yes 70867505
chr19 50276594 50276608 MTF1 JASPAR yes 113729888
chr19 50276602 50276611 THAP1 JASPAR yes 70867506
chr19 50276602 50276611 THAP1 JASPAR yes 113729889
SNP sites on vista29780[chr19:50276330-50276635]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29780[chr19:50276330-50276635]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 50179043 50192286 + PRMT1 ENSG00000126457.16 50179043 0.79 1.0 17854 2713
chr19 50191921 50193832 + ADM5 ENSG00000224420.3 50191921 0.77 1.0 17855 15591
chr19 50194155 50216988 + CPT1C ENSG00000169169.10 50194155 0.82 1.0 17856 17825
chr19 50243010 50266587 - TSKS ENSG00000126467.6 50266587 0.77 1.0 17857 90257
chr19 50270225 50310370 + AP2A1 ENSG00000196961.8 50270225 0.6 1.0 17858 93895
chr19 50310126 50320633 - FUZ ENSG00000010361.9 50320633 0.72 1.0 17859 56002
chr19 50321539 50342073 + MED25 ENSG00000104973.10 50321539 0.65 1.0 17860 55096
chr19 50353992 50364001 + PTOV1 ENSG00000104960.11 50353992 0.81 1.0 17861 22643
chr19 50364461 50371166 - PNKP ENSG00000039650.5 50371166 0.61 1.0 17862 5469
Expression level of Genes
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miRNAs possibly regulated by vista29780[chr19:50276330-50276635]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results