EnhancerDB
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  3. vista29781[chr19:50317454-50317522]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29781[chr19:50317454-50317522]
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Tissue distribution of vista29781
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Transcription factor that possibly regulate vista29781[chr19:50317454-50317522]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 50317436 50317454 MAFF JASPAR yes 70867507
chr19 50317436 50317454 MAFF JASPAR yes 113733082
chr19 50317472 50317485 POU2F2 JASPAR yes 70867508
chr19 50317472 50317485 POU2F2 JASPAR yes 113733084
chr19 50317477 50317490 POU3F3 JASPAR yes 70867509
chr19 50317477 50317490 POU3F3 JASPAR yes 113733085
chr19 50317478 50317489 FOXC1 JASPAR yes 70867510
chr19 50317478 50317489 FOXC1 JASPAR yes 113733086
chr19 50317479 50317483 YY1 TRANSFAC yes 70867511
chr19 50317479 50317483 YY1 TRANSFAC yes 113733087
chr19 50317481 50317491 HOXA13 JASPAR yes 70867512
chr19 50317481 50317491 HOXB13 JASPAR yes 70867513
chr19 50317481 50317491 HOXD13 JASPAR yes 70867514
chr19 50317481 50317491 HOXA13 JASPAR yes 113733088
chr19 50317481 50317491 HOXB13 JASPAR yes 113733089
chr19 50317481 50317491 HOXD13 JASPAR yes 113733090
chr19 50317481 50317492 HOXA10 JASPAR yes 70867515
chr19 50317481 50317492 HOXA10 JASPAR yes 113733091
chr19 50317482 50317491 CDX1 JASPAR yes 70867516
chr19 50317482 50317491 CDX1 JASPAR yes 113733092
chr19 50317482 50317493 CDX2 JASPAR yes 70867517
chr19 50317482 50317493 CDX2 JASPAR yes 113733093
chr19 50317488 50317492 YY1 TRANSFAC yes 70867518
chr19 50317488 50317492 YY1 TRANSFAC yes 113733094
chr19 50317504 50317508 YY1 TRANSFAC yes 70867519
chr19 50317504 50317508 YY1 TRANSFAC yes 113733095
SNP sites on vista29781[chr19:50317454-50317522]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29781[chr19:50317454-50317522]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 50243010 50266587 - TSKS ENSG00000126467.6 50266587 0.77 1.0 17857 49133
chr19 50270225 50310370 + AP2A1 ENSG00000196961.8 50270225 0.6 1.0 17858 52771
chr19 50310126 50320633 - FUZ ENSG00000010361.9 50320633 0.72 1.0 17859 96889
chr19 50321539 50342073 + MED25 ENSG00000104973.10 50321539 0.65 1.0 17860 95983
chr19 50353992 50364001 + PTOV1 ENSG00000104960.11 50353992 0.81 1.0 17861 63530
chr19 50364461 50371166 - PNKP ENSG00000039650.5 50371166 0.61 1.0 17862 46356
chr19 50372295 50381716 - AKT1S1 ENSG00000204673.6 50381716 0.61 1.0 17863 35806
chr19 50380682 50392005 + TBC1D17 ENSG00000104946.6 50380682 0.66 1.0 17864 36840
Expression level of Genes
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miRNAs possibly regulated by vista29781[chr19:50317454-50317522]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results