EnhancerDB
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  3. vista29788[chr19:50417620-50417965]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29788[chr19:50417620-50417965]
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Tissue distribution of vista29788
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Transcription factor that possibly regulate vista29788[chr19:50417620-50417965]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 50417624 50417643 REST JASPAR yes 70867810
chr19 50417635 50417645 SP1 JASPAR yes 70867811
chr19 50417639 50417657 ESR1 JASPAR yes 70867812
chr19 50417650 50417662 TAL1 JASPAR yes 70867813
chr19 50417660 50417679 PAX5 JASPAR yes 70867814
chr19 50417663 50417680 PAX1 JASPAR yes 70867815
chr19 50417663 50417680 PAX9 JASPAR yes 70867816
chr19 50417702 50417710 CREB1 JASPAR yes 70867817
chr19 50417703 50417711 NR4A2 JASPAR yes 70867818
chr19 50417705 50417709 ESR1 TRANSFAC yes 70867819
chr19 50417712 50417717 ETS2 TRANSFAC yes 70867820
chr19 50417714 50417729 HSF1 JASPAR yes 70867821
chr19 50417715 50417728 HSF4 JASPAR yes 70867822
chr19 50417720 50417729 THAP1 JASPAR yes 70867823
chr19 50417740 50417761 ZNF263 JASPAR yes 70867824
chr19 50417743 50417754 FLI1 JASPAR yes 70867825
chr19 50417744 50417765 ZNF263 JASPAR yes 70867826
chr19 50417745 50417753 EHF JASPAR yes 70867827
chr19 50417747 50417766 PAX5 JASPAR yes 70867828
chr19 50417758 50417764 NFE2 TRANSFAC yes 70867829
chr19 50417767 50417771 YY1 TRANSFAC yes 70867830
chr19 50417820 50417826 PEA3 TRANSFAC yes 70867831
chr19 50417864 50417873 ZEB1 JASPAR yes 70867832
chr19 50417866 50417871 SP1 TRANSFAC yes 70867833
chr19 50417866 50417875 HIC2 JASPAR yes 70867834
chr19 50417869 50417873 LFA1 TRANSFAC yes 70867835
chr19 50417874 50417879 GATA2 JASPAR yes 70867836
chr19 50417878 50417888 ZNF740 JASPAR yes 70867837
chr19 50417879 50417889 GCM2 JASPAR yes 70867838
chr19 50417905 50417911 TCF4 TRANSFAC yes 70867839
chr19 50417909 50417917 MEIS2 JASPAR yes 70867840
chr19 50417909 50417917 MEIS3 JASPAR yes 70867841
chr19 50417910 50417914 NFE TRANSFAC yes 70867842
chr19 50417912 50417922 SREBF1 JASPAR yes 70867843
chr19 50417912 50417922 SREBF2 JASPAR yes 70867844
chr19 50417927 50417931 ESR1 TRANSFAC yes 70867845
SNP sites on vista29788[chr19:50417620-50417965]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29788[chr19:50417620-50417965]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 50310126 50320633 - FUZ ENSG00000010361.9 50320633 0.72 1.0 17859 3013
chr19 50321539 50342073 + MED25 ENSG00000104973.10 50321539 0.65 1.0 17860 3919
chr19 50353992 50364001 + PTOV1 ENSG00000104960.11 50353992 0.81 1.0 17861 36372
chr19 50364461 50371166 - PNKP ENSG00000039650.5 50371166 0.61 1.0 17862 53546
chr19 50372295 50381716 - AKT1S1 ENSG00000204673.6 50381716 0.61 1.0 17863 64096
chr19 50380682 50392005 + TBC1D17 ENSG00000104946.6 50380682 0.66 1.0 17864 63062
chr19 50392911 50432796 - IL4I1 ENSG00000104951.11 50432796 0.95 0.98 17865 85169
chr19 50410082 50433020 - NUP62 ENSG00000213024.6 50433020 0.74 0.99 17866 84945
chr19 50412758 50461648 - CTC-326K19.6 ENSG00000269179.1 50461648 1.0 1.0 17867 56317
chr19 50431959 50437192 + ATF5 ENSG00000169136.4 50431959 0.99 0.99 17868 86006
chr19 50452242 50464429 - SIGLEC11 ENSG00000161640.11 50464429 0.97 0.93 17869 53536
Expression level of Genes
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miRNAs possibly regulated by vista29788[chr19:50417620-50417965]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results