EnhancerDB
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  3. vista29801[chr19:50860908-50861268]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29801[chr19:50860908-50861268]
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Tissue distribution of vista29801
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Transcription factor that possibly regulate vista29801[chr19:50860908-50861268]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 50860298 50860911 CTCF UCSC Txn Factor no Conserved 108424651
chr19 50860791 50861098 JUND UCSC Txn Factor no Conserved 108424656
chr19 50860845 50862668 POLR2A UCSC Txn Factor no Conserved 108424662
chr19 50860873 50862205 PHF8 UCSC Txn Factor no Conserved 108424665
chr19 50860914 50861350 MAX UCSC Txn Factor no Conserved 108424668
chr19 50861054 50861335 EGR1 UCSC Txn Factor no Conserved 108424689
chr19 50860917 50860938 ZNF263 JASPAR yes 70868439
chr19 50860923 50860933 SP1 JASPAR yes 70868440
chr19 50860924 50860931 CEBPA TRANSFAC yes 70868441
chr19 50860925 50860940 PRDM1 JASPAR yes 70868442
chr19 50860926 50860936 MZF1 JASPAR yes 70868443
chr19 50860932 50860944 CREB1 JASPAR yes 70868444
chr19 50860932 50860947 JUND JASPAR yes 70868445
chr19 50860933 50860946 JUN JASPAR yes 70868446
chr19 50860934 50860948 ATF7 JASPAR yes 70868447
chr19 50860934 50860948 BATF3 JASPAR yes 70868448
chr19 50860935 50860947 JDP2 JASPAR yes 70868449
chr19 50860935 50860950 JUND JASPAR yes 70868450
chr19 50860936 50860949 JUN JASPAR yes 70868451
chr19 50860937 50860942 ATF1 TRANSFAC yes 70868452
chr19 50860937 50860945 CREB1 JASPAR yes 70868453
chr19 50860939 50860944 ATF1 TRANSFAC yes 70868454
chr19 50860945 50860960 ZIC3 JASPAR yes 70868455
chr19 50860945 50860960 ZIC4 JASPAR yes 70868456
chr19 50860946 50860960 GLIS2 JASPAR yes 70868457
chr19 50860946 50860960 ZIC1 JASPAR yes 70868458
chr19 50860953 50860958 SP1 TRANSFAC yes 70868459
chr19 50860957 50860961 LFA1 TRANSFAC yes 70868460
chr19 50860977 50860986 TFAP2A JASPAR yes 70868461
chr19 50860981 50860986 SP1 TRANSFAC yes 70868462
chr19 50860991 50861005 EBF1 JASPAR yes 70868463
chr19 50860992 50861003 EBF1 JASPAR yes 70868464
chr19 50860993 50860999 MZF1 JASPAR yes 70868465
chr19 50861008 50861029 ZNF263 JASPAR yes 70868466
chr19 50861019 50861040 ZNF263 JASPAR yes 70868467
chr19 50861022 50861043 ZNF263 JASPAR yes 70868468
chr19 50861057 50861062 GATA2 JASPAR yes 70868469
chr19 50861063 50861075 INSM1 JASPAR yes 70868470
chr19 50861094 50861104 EN2 JASPAR yes 70868471
chr19 50861094 50861104 GBX1 JASPAR yes 70868472
chr19 50861094 50861104 GBX2 JASPAR yes 70868473
chr19 50861095 50861099 H1TF2 TRANSFAC yes 70868474
chr19 50861095 50861099 NFE TRANSFAC yes 70868475
chr19 50861095 50861099 SRF TRANSFAC yes 70868476
chr19 50861095 50861103 BSX JASPAR yes 70868477
chr19 50861095 50861103 DLX6 JASPAR yes 70868478
chr19 50861095 50861103 MSX1 JASPAR yes 70868479
chr19 50861095 50861103 MSX2 JASPAR yes 70868480
chr19 50861116 50861128 PKNOX1 JASPAR yes 70868481
chr19 50861116 50861128 TGIF1 JASPAR yes 70868482
chr19 50861116 50861128 TGIF2 JASPAR yes 70868483
chr19 50861117 50861127 ID4 JASPAR yes 70868484
chr19 50861118 50861127 SNAI2 JASPAR yes 70868485
chr19 50861118 50861131 SCRT2 JASPAR yes 70868486
chr19 50861119 50861124 USF2 TRANSFAC yes 70868487
chr19 50861122 50861126 NFE TRANSFAC yes 70868488
chr19 50861126 50861142 RFX5 JASPAR yes 70868489
chr19 50861137 50861150 SCRT2 JASPAR yes 70868490
chr19 50861141 50861145 NFE TRANSFAC yes 70868491
chr19 50861146 50861157 E2F6 JASPAR yes 70868492
chr19 50861168 50861179 NRF1 JASPAR yes 70868493
chr19 50861170 50861177 SP1 TRANSFAC yes 70868494
chr19 50861170 50861180 SP1 JASPAR yes 70868495
chr19 50861171 50861178 SP1 TRANSFAC yes 70868496
chr19 50861172 50861177 SP1 TRANSFAC yes 70868497
chr19 50861172 50861178 SP1 TRANSFAC yes 70868498
chr19 50861172 50861179 SP1 TRANSFAC yes 70868499
chr19 50861199 50861205 ZNF354C JASPAR yes 70868500
chr19 50861245 50861251 ETS1 JASPAR yes 70868501
chr19 50861245 50861251 SPI1 JASPAR yes 70868502
SNP sites on vista29801[chr19:50860908-50861268]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29801[chr19:50860908-50861268]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 50815194 50836772 - KCNC3 ENSG00000131398.9 50836772 0.93 0.99 17874 75864
chr19 50832910 50886239 + NR1H2 ENSG00000131408.9 50832910 0.63 1.0 17875 72002
chr19 50861734 50869087 - NAPSA ENSG00000131400.3 50869087 1.0 1.0 17876 92181
chr19 50887461 50921273 + POLD1 ENSG00000062822.8 50887461 0.86 1.0 17877 73807
chr19 50919056 50931666 + CTD-2545M3.6 ENSG00000142539.9 50919056 0.99 0.97 17878 42212
chr19 50922195 50934570 + SPIB ENSG00000269404.2 50922195 0.95 0.94 17879 39073
chr19 50936160 50969578 + MYBPC2 ENSG00000086967.9 50936160 0.98 0.96 17880 25108
Expression level of Genes
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miRNAs possibly regulated by vista29801[chr19:50860908-50861268]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results