EnhancerDB
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  3. vista29802[chr19:50872495-50872846]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29802[chr19:50872495-50872846]
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Tissue distribution of vista29802
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Transcription factor that possibly regulate vista29802[chr19:50872495-50872846]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 50871838 50872951 POLR2A UCSC Txn Factor no Conserved 108424703
chr19 50872485 50872786 USF2 UCSC Txn Factor no Conserved 108424727
chr19 50872494 50872764 USF1 UCSC Txn Factor no Conserved 108424730
chr19 50872529 50872817 ELF1 UCSC Txn Factor no Conserved 108424739
chr19 50872503 50872513 ID4 JASPAR yes 70868503
chr19 50872503 50872513 TCF3 JASPAR yes 70868504
chr19 50872503 50872513 TCF4 JASPAR yes 70868505
chr19 50872520 50872534 STAT1 JASPAR yes 70868506
chr19 50872524 50872529 MYB TRANSFAC yes 70868507
chr19 50872560 50872570 SREBF1 JASPAR yes 70868508
chr19 50872560 50872570 SREBF2 JASPAR yes 70868509
chr19 50872613 50872627 E2F7 JASPAR yes 70868510
chr19 50872614 50872626 E2F8 JASPAR yes 70868511
chr19 50872617 50872622 SP1 TRANSFAC yes 70868512
chr19 50872626 50872630 NFE TRANSFAC yes 70868513
chr19 50872627 50872637 MAX JASPAR yes 70868514
chr19 50872627 50872638 USF1 JASPAR yes 70868515
chr19 50872627 50872638 USF2 JASPAR yes 70868516
chr19 50872628 50872638 BHLHE40 JASPAR yes 70868517
chr19 50872628 50872638 BHLHE41 JASPAR yes 70868518
chr19 50872628 50872638 MAX JASPAR yes 70868519
chr19 50872628 50872638 MLXIPL JASPAR yes 70868520
chr19 50872628 50872638 MLX JASPAR yes 70868521
chr19 50872628 50872638 MNT JASPAR yes 70868522
chr19 50872628 50872638 SREBF2 JASPAR yes 70868523
chr19 50872628 50872638 TFE3 JASPAR yes 70868524
chr19 50872628 50872638 TFEB JASPAR yes 70868525
chr19 50872628 50872638 TFEC JASPAR yes 70868526
chr19 50872628 50872639 USF2 JASPAR yes 70868527
chr19 50872629 50872639 MAX JASPAR yes 70868528
chr19 50872630 50872635 MYC TRANSFAC yes 70868529
chr19 50872630 50872635 USF1 TRANSFAC yes 70868530
chr19 50872630 50872635 USF2 TRANSFAC yes 70868531
chr19 50872630 50872637 USF1 JASPAR yes 70868532
chr19 50872656 50872669 ELF1 JASPAR yes 70868533
chr19 50872657 50872667 ELK1 JASPAR yes 70868534
chr19 50872657 50872669 EHF JASPAR yes 70868535
chr19 50872657 50872669 ELF1 JASPAR yes 70868536
chr19 50872657 50872669 ELF4 JASPAR yes 70868537
chr19 50872657 50872670 ELF3 JASPAR yes 70868538
chr19 50872658 50872669 ELF5 JASPAR yes 70868539
chr19 50872658 50872669 ETV2 JASPAR yes 70868540
chr19 50872658 50872669 SPDEF JASPAR yes 70868541
chr19 50872659 50872668 ELK4 JASPAR yes 70868542
chr19 50872659 50872669 ELK3 JASPAR yes 70868543
chr19 50872659 50872669 ERG JASPAR yes 70868544
chr19 50872659 50872669 ETS1 JASPAR yes 70868545
chr19 50872659 50872669 ETV3 JASPAR yes 70868546
chr19 50872659 50872669 ETV6 JASPAR yes 70868547
chr19 50872659 50872669 FEV JASPAR yes 70868548
chr19 50872659 50872669 FLI1 JASPAR yes 70868549
chr19 50872659 50872670 ELK4 JASPAR yes 70868550
chr19 50872660 50872668 FEV JASPAR yes 70868551
chr19 50872661 50872667 ETS1 JASPAR yes 70868552
chr19 50872670 50872683 ZBTB18 JASPAR yes 70868553
chr19 50872674 50872679 MYC TRANSFAC yes 70868554
chr19 50872714 50872730 ZNF143 JASPAR yes 70868555
chr19 50872738 50872752 PLAG1 JASPAR yes 70868556
chr19 50872751 50872766 TP53 JASPAR yes 70868557
chr19 50872782 50872795 EOMES JASPAR yes 70868558
chr19 50872784 50872794 TBR1 JASPAR yes 70868559
chr19 50872784 50872795 TBX2 JASPAR yes 70868560
chr19 50872785 50872795 TBX21 JASPAR yes 70868561
chr19 50872786 50872794 TBX15 JASPAR yes 70868562
chr19 50872786 50872794 TBX4 JASPAR yes 70868563
chr19 50872807 50872811 YY1 TRANSFAC yes 70868564
chr19 50872807 50872815 HOXA5 JASPAR yes 70868565
chr19 50872809 50872830 IRF1 JASPAR yes 70868566
chr19 50872810 50872825 FOXP1 JASPAR yes 70868567
chr19 50872810 50872831 IRF1 JASPAR yes 70868568
chr19 50872812 50872827 FOXP1 JASPAR yes 70868569
chr19 50872812 50872833 IRF1 JASPAR yes 70868570
chr19 50872813 50872834 IRF1 JASPAR yes 70868571
chr19 50872814 50872829 FOXP1 JASPAR yes 70868572
chr19 50872814 50872835 IRF1 JASPAR yes 70868573
chr19 50872815 50872830 FOXP1 JASPAR yes 70868574
chr19 50872815 50872836 IRF1 JASPAR yes 70868575
chr19 50872816 50872831 FOXP1 JASPAR yes 70868576
chr19 50872816 50872837 IRF1 JASPAR yes 70868577
chr19 50872817 50872832 FOXP1 JASPAR yes 70868578
chr19 50872817 50872838 IRF1 JASPAR yes 70868579
chr19 50872818 50872833 FOXP1 JASPAR yes 70868580
chr19 50872818 50872839 IRF1 JASPAR yes 70868581
chr19 50872819 50872834 FOXP1 JASPAR yes 70868582
chr19 50872819 50872840 IRF1 JASPAR yes 70868583
chr19 50872820 50872835 FOXP1 JASPAR yes 70868584
chr19 50872820 50872841 IRF1 JASPAR yes 70868585
chr19 50872821 50872836 FOXP1 JASPAR yes 70868586
chr19 50872821 50872842 IRF1 JASPAR yes 70868587
chr19 50872822 50872837 FOXP1 JASPAR yes 70868588
chr19 50872822 50872843 IRF1 JASPAR yes 70868589
chr19 50872823 50872838 FOXP1 JASPAR yes 70868590
chr19 50872823 50872844 IRF1 JASPAR yes 70868591
chr19 50872824 50872839 FOXP1 JASPAR yes 70868592
chr19 50872825 50872840 FOXP1 JASPAR yes 70868593
chr19 50872826 50872841 FOXP1 JASPAR yes 70868594
chr19 50872827 50872842 FOXP1 JASPAR yes 70868595
chr19 50872828 50872843 FOXP1 JASPAR yes 70868596
chr19 50872829 50872844 FOXP1 JASPAR yes 70868597
chr19 50872830 50872845 FOXP1 JASPAR yes 70868598
chr19 50872831 50872846 FOXP1 JASPAR yes 70868599
SNP sites on vista29802[chr19:50872495-50872846]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29802[chr19:50872495-50872846]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 50815194 50836772 - KCNC3 ENSG00000131398.9 50836772 0.93 0.99 17874 64277
chr19 50832910 50886239 + NR1H2 ENSG00000131408.9 50832910 0.63 1.0 17875 60415
chr19 50861734 50869087 - NAPSA ENSG00000131400.3 50869087 1.0 1.0 17876 96592
chr19 50887461 50921273 + POLD1 ENSG00000062822.8 50887461 0.86 1.0 17877 85385
chr19 50919056 50931666 + CTD-2545M3.6 ENSG00000142539.9 50919056 0.99 0.97 17878 53790
chr19 50922195 50934570 + SPIB ENSG00000269404.2 50922195 0.95 0.94 17879 50651
chr19 50936160 50969578 + MYBPC2 ENSG00000086967.9 50936160 0.98 0.96 17880 36686
Expression level of Genes
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miRNAs possibly regulated by vista29802[chr19:50872495-50872846]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results