EnhancerDB
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  3. vista29808[chr19:51003635-51004295]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29808[chr19:51003635-51004295]
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Tissue distribution of vista29808
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Transcription factor that possibly regulate vista29808[chr19:51003635-51004295]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 51003606 51003723 TAL1 UCSC Txn Factor no Conserved 108424868
chr19 51003653 51003657 LFA1 TRANSFAC yes 70868974
chr19 51003656 51003668 PKNOX2 JASPAR yes 70868975
chr19 51003657 51003667 MSC JASPAR yes 70868976
chr19 51003657 51003667 MYF6 JASPAR yes 70868977
chr19 51003657 51003667 NHLH1 JASPAR yes 70868978
chr19 51003661 51003669 MEIS2 JASPAR yes 70868979
chr19 51003661 51003669 MEIS3 JASPAR yes 70868980
chr19 51003662 51003666 NFE TRANSFAC yes 70868981
chr19 51003665 51003684 CTCF JASPAR yes 70868982
chr19 51003667 51003681 ZIC1 JASPAR yes 70868983
chr19 51003683 51003695 PKNOX1 JASPAR yes 70868984
chr19 51003683 51003695 PKNOX2 JASPAR yes 70868985
chr19 51003683 51003695 TGIF1 JASPAR yes 70868986
chr19 51003683 51003695 TGIF2 JASPAR yes 70868987
chr19 51003684 51003694 MSC JASPAR yes 70868988
chr19 51003684 51003694 MYF6 JASPAR yes 70868989
chr19 51003684 51003694 TFAP4 JASPAR yes 70868990
chr19 51003689 51003693 NFE TRANSFAC yes 70868991
chr19 51003691 51003701 MZF1 JASPAR yes 70868992
chr19 51003693 51003703 SP1 JASPAR yes 70868993
chr19 51003694 51003700 SP1 TRANSFAC yes 70868994
chr19 51003694 51003704 SP1 JASPAR yes 70868995
chr19 51003695 51003705 SP1 JASPAR yes 70868996
chr19 51003695 51003716 ZNF263 JASPAR yes 70868997
chr19 51003699 51003709 ZNF740 JASPAR yes 70868998
chr19 51003703 51003712 ZEB1 JASPAR yes 70868999
chr19 51003704 51003714 ID4 JASPAR yes 70869000
chr19 51003704 51003714 NHLH1 JASPAR yes 70869001
chr19 51003704 51003714 TCF3 JASPAR yes 70869002
chr19 51003704 51003714 TCF4 JASPAR yes 70869003
chr19 51003705 51003714 SNAI2 JASPAR yes 70869004
chr19 51003706 51003711 USF2 TRANSFAC yes 70869005
chr19 51003727 51003742 RUNX2 JASPAR yes 70869006
chr19 51003737 51003743 SP1 TRANSFAC yes 70869007
chr19 51003737 51003747 SP1 JASPAR yes 70869008
chr19 51003738 51003749 E2F6 JASPAR yes 70869009
chr19 51003741 51003756 PRDM1 JASPAR yes 70869010
chr19 51003757 51003772 TFAP2C JASPAR yes 70869011
chr19 51003758 51003769 TFAP2A JASPAR yes 70869012
chr19 51003758 51003769 TFAP2B JASPAR yes 70869013
chr19 51003758 51003769 TFAP2C JASPAR yes 70869014
chr19 51003758 51003770 INSM1 JASPAR yes 70869015
chr19 51003758 51003770 TFAP2A JASPAR yes 70869016
chr19 51003759 51003768 TFAP2A JASPAR yes 70869017
chr19 51003801 51003809 SP1 TRANSFAC yes 70869018
chr19 51003801 51003811 SP1 JASPAR yes 70869019
chr19 51003825 51003844 PAX5 JASPAR yes 70869020
chr19 51003828 51003842 TLX1 JASPAR yes 70869021
chr19 51003828 51003848 ESR1 JASPAR yes 70869022
chr19 51003834 51003849 TFAP2A JASPAR yes 70869023
chr19 51003837 51003849 TFAP2A JASPAR yes 70869024
chr19 51003837 51003849 TFAP2B JASPAR yes 70869025
chr19 51003837 51003849 TFAP2C JASPAR yes 70869026
chr19 51003837 51003852 TFAP2A JASPAR yes 70869027
chr19 51003837 51003852 TFAP2C JASPAR yes 70869028
chr19 51003838 51003847 TFAP2A JASPAR yes 70869029
chr19 51003839 51003848 TFAP2A JASPAR yes 70869030
chr19 51003844 51003848 LFA1 TRANSFAC yes 70869031
chr19 51003875 51003889 EBF1 JASPAR yes 70869032
chr19 51003876 51003887 EBF1 JASPAR yes 70869033
chr19 51003883 51003888 ETS2 TRANSFAC yes 70869034
chr19 51003894 51003909 ZIC3 JASPAR yes 70869035
chr19 51003894 51003909 ZIC4 JASPAR yes 70869036
chr19 51003895 51003909 ZIC1 JASPAR yes 70869037
chr19 51003902 51003907 SP1 TRANSFAC yes 70869038
chr19 51003907 51003911 LFA1 TRANSFAC yes 70869039
chr19 51003908 51003919 NRF1 JASPAR yes 70869040
chr19 51003932 51003936 LFA1 TRANSFAC yes 70869041
chr19 51003951 51003964 ATF4 JASPAR yes 70869042
chr19 51003971 51003975 NFE TRANSFAC yes 70869043
chr19 51003984 51003993 ZEB1 JASPAR yes 70869044
chr19 51003984 51003996 PKNOX1 JASPAR yes 70869045
chr19 51003984 51003996 PKNOX2 JASPAR yes 70869046
chr19 51003987 51003992 USF2 TRANSFAC yes 70869047
chr19 51003999 51004009 GCM2 JASPAR yes 70869048
chr19 51004002 51004023 ZNF263 JASPAR yes 70869049
chr19 51004009 51004030 ZNF263 JASPAR yes 70869050
chr19 51004010 51004014 LFA1 TRANSFAC yes 70869051
chr19 51004014 51004025 E2F6 JASPAR yes 70869052
chr19 51004016 51004037 ZNF263 JASPAR yes 70869053
chr19 51004025 51004042 RXRA JASPAR yes 70869054
chr19 51004026 51004041 ZIC3 JASPAR yes 70869055
chr19 51004033 51004046 NR2F1 JASPAR yes 70869056
chr19 51004033 51004053 PPARG JASPAR yes 70869057
chr19 51004034 51004052 ESR2 JASPAR yes 70869058
chr19 51004035 51004052 ESR1 JASPAR yes 70869059
chr19 51004036 51004051 ESR2 JASPAR yes 70869060
chr19 51004037 51004041 ESR1 TRANSFAC yes 70869061
chr19 51004045 51004066 ZNF263 JASPAR yes 70869062
chr19 51004047 51004057 SP1 JASPAR yes 70869063
chr19 51004051 51004071 RREB1 JASPAR yes 70869064
chr19 51004052 51004062 ZNF740 JASPAR yes 70869065
chr19 51004054 51004074 RREB1 JASPAR yes 70869066
chr19 51004054 51004075 ZNF263 JASPAR yes 70869067
chr19 51004056 51004066 SP1 JASPAR yes 70869068
chr19 51004056 51004071 ZIC3 JASPAR yes 70869069
chr19 51004056 51004076 RREB1 JASPAR yes 70869070
chr19 51004060 51004074 PLAG1 JASPAR yes 70869071
chr19 51004077 51004087 SP1 JASPAR yes 70869072
chr19 51004078 51004099 ZNF263 JASPAR yes 70869073
chr19 51004101 51004119 SRF JASPAR yes 70869074
chr19 51004103 51004119 SRF JASPAR yes 70869075
chr19 51004103 51004121 SRF JASPAR yes 70869076
chr19 51004104 51004116 SRF JASPAR yes 70869077
chr19 51004106 51004118 SRF JASPAR yes 70869078
chr19 51004109 51004113 YY1 TRANSFAC yes 70869079
chr19 51004128 51004137 ZEB1 JASPAR yes 70869080
chr19 51004128 51004140 NHLH1 JASPAR yes 70869081
chr19 51004129 51004139 ID4 JASPAR yes 70869082
chr19 51004129 51004139 TCF3 JASPAR yes 70869083
chr19 51004129 51004139 TCF4 JASPAR yes 70869084
chr19 51004131 51004136 USF2 TRANSFAC yes 70869085
chr19 51004137 51004142 SP1 TRANSFAC yes 70869086
chr19 51004147 51004153 SP1 TRANSFAC yes 70869087
chr19 51004159 51004180 REST JASPAR yes 70869088
chr19 51004160 51004179 REST JASPAR yes 70869089
chr19 51004163 51004178 MEF2C JASPAR yes 70869090
chr19 51004164 51004179 MEF2A JASPAR yes 70869091
chr19 51004188 51004194 SP1 TRANSFAC yes 70869092
chr19 51004198 51004202 NFE TRANSFAC yes 70869093
chr19 51004198 51004211 SMAD2 JASPAR yes 70869094
chr19 51004243 51004249 MAZ TRANSFAC yes 70869095
chr19 51004247 51004252 SP1 TRANSFAC yes 70869096
chr19 51004247 51004261 PLAG1 JASPAR yes 70869097
chr19 51004249 51004261 TFAP2A JASPAR yes 70869098
chr19 51004249 51004261 TFAP2C JASPAR yes 70869099
chr19 51004249 51004264 TFAP2A JASPAR yes 70869100
chr19 51004249 51004264 TFAP2C JASPAR yes 70869101
chr19 51004252 51004263 ESRRA JASPAR yes 70869102
chr19 51004255 51004276 ZNF263 JASPAR yes 70869103
chr19 51004256 51004260 LFA1 TRANSFAC yes 70869104
chr19 51004269 51004282 SMAD2 JASPAR yes 70869105
SNP sites on vista29808[chr19:51003635-51004295]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29808[chr19:51003635-51004295]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 50919056 50931666 + CTD-2545M3.6 ENSG00000142539.9 50919056 0.99 0.97 17878 15421
chr19 50922195 50934570 + SPIB ENSG00000269404.2 50922195 0.95 0.94 17879 18560
chr19 50936160 50969578 + MYBPC2 ENSG00000086967.9 50936160 0.98 0.96 17880 32525
chr19 50970042 50980010 - FAM71E1 ENSG00000142530.6 50980010 0.83 1.0 17881 76375
chr19 50979657 50986608 + EMC10 ENSG00000161671.12 50979657 0.72 1.0 17882 76022
chr19 51009255 51014610 - JOSD2 ENSG00000161677.7 51014610 0.62 1.0 17883 89685
chr19 51014857 51017947 - ASPDH ENSG00000204653.5 51017947 0.99 1.0 17884 86348
chr19 51020149 51071302 - LRRC4B ENSG00000131409.8 51071302 0.85 1.0 17885 32993
Expression level of Genes
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miRNAs possibly regulated by vista29808[chr19:51003635-51004295]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results