EnhancerDB
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  3. vista29826[chr19:51318804-51318947]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29826[chr19:51318804-51318947]
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Tissue distribution of vista29826
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Transcription factor that possibly regulate vista29826[chr19:51318804-51318947]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 51318706 51319125 USF1 UCSC Txn Factor no Conserved 108425359
chr19 51318809 51318814 ETS2 TRANSFAC yes 70870246
chr19 51318809 51318814 ETS2 TRANSFAC yes 113759316
chr19 51318813 51318820 MEIS1 JASPAR yes 70870247
chr19 51318813 51318820 MEIS1 JASPAR yes 113759317
chr19 51318813 51318821 MEIS2 JASPAR yes 70870248
chr19 51318813 51318821 MEIS3 JASPAR yes 70870249
chr19 51318813 51318821 MEIS2 JASPAR yes 113759318
chr19 51318813 51318821 MEIS3 JASPAR yes 113759319
chr19 51318823 51318834 HOXA10 JASPAR yes 70870250
chr19 51318823 51318834 HOXA10 JASPAR yes 113759320
chr19 51318824 51318833 CDX1 JASPAR yes 70870251
chr19 51318824 51318833 CDX1 JASPAR yes 113759321
chr19 51318824 51318834 HOXA13 JASPAR yes 70870252
chr19 51318824 51318834 HOXB13 JASPAR yes 70870253
chr19 51318824 51318834 HOXD13 JASPAR yes 70870254
chr19 51318824 51318834 HOXA13 JASPAR yes 113759322
chr19 51318824 51318834 HOXB13 JASPAR yes 113759323
chr19 51318824 51318834 HOXD13 JASPAR yes 113759324
chr19 51318828 51318840 PROX1 JASPAR yes 70870255
chr19 51318828 51318840 PROX1 JASPAR yes 113759325
chr19 51318840 51318844 LFA1 TRANSFAC yes 70870256
chr19 51318840 51318844 LFA1 TRANSFAC yes 113759326
chr19 51318846 51318862 NFYA JASPAR yes 70870257
chr19 51318846 51318862 NFYA JASPAR yes 113759327
chr19 51318848 51318860 PBX1 JASPAR yes 70870258
chr19 51318848 51318860 PBX1 JASPAR yes 113759328
chr19 51318849 51318864 NFYB JASPAR yes 70870259
chr19 51318849 51318864 NFYB JASPAR yes 113759329
chr19 51318851 51318856 NFY TRANSFAC yes 70870260
chr19 51318851 51318856 NFY TRANSFAC yes 113759330
chr19 51318857 51318872 HNF4A JASPAR yes 70870261
chr19 51318857 51318872 HNF4A JASPAR yes 113759331
chr19 51318866 51318870 ESR1 TRANSFAC yes 70870262
chr19 51318866 51318870 ESR1 TRANSFAC yes 113759332
chr19 51318866 51318877 USF1 JASPAR yes 70870263
chr19 51318866 51318877 USF1 JASPAR yes 113759333
chr19 51318867 51318877 TFEB JASPAR yes 70870264
chr19 51318867 51318877 TFEC JASPAR yes 70870265
chr19 51318867 51318877 TFEB JASPAR yes 113759334
chr19 51318867 51318877 TFEC JASPAR yes 113759335
chr19 51318867 51318878 USF1 JASPAR yes 70870266
chr19 51318867 51318878 USF1 JASPAR yes 113759336
chr19 51318872 51318884 YY1 JASPAR yes 70870267
chr19 51318872 51318884 YY1 JASPAR yes 113759337
chr19 51318873 51318889 SRF JASPAR yes 70870268
chr19 51318873 51318889 SRF JASPAR yes 113759338
chr19 51318873 51318891 SRF JASPAR yes 70870269
chr19 51318873 51318891 SRF JASPAR yes 113759339
chr19 51318886 51318901 SOX21 JASPAR yes 70870270
chr19 51318886 51318901 SOX21 JASPAR yes 113759340
chr19 51318887 51318891 H1TF2 TRANSFAC yes 70870271
chr19 51318887 51318891 NFE TRANSFAC yes 70870272
chr19 51318887 51318891 SRF TRANSFAC yes 70870273
chr19 51318887 51318891 H1TF2 TRANSFAC yes 113759341
chr19 51318887 51318891 NFE TRANSFAC yes 113759342
chr19 51318887 51318891 SRF TRANSFAC yes 113759343
chr19 51318900 51318912 NHLH1 JASPAR yes 70870274
chr19 51318900 51318912 NHLH1 JASPAR yes 113759344
chr19 51318901 51318911 NHLH1 JASPAR yes 70870275
chr19 51318901 51318911 NHLH1 JASPAR yes 113759345
chr19 51318910 51318928 NFYA JASPAR yes 70870276
chr19 51318910 51318928 NFYA JASPAR yes 113759346
chr19 51318913 51318929 NFYA JASPAR yes 70870277
chr19 51318913 51318929 NFYA JASPAR yes 113759347
chr19 51318916 51318929 DUXA JASPAR yes 70870278
chr19 51318916 51318929 DUXA JASPAR yes 113759348
chr19 51318916 51318931 NFYB JASPAR yes 70870279
chr19 51318916 51318931 NFYB JASPAR yes 113759349
chr19 51318917 51318928 DUX4 JASPAR yes 70870280
chr19 51318917 51318928 DUX4 JASPAR yes 113759350
chr19 51318918 51318923 NFY TRANSFAC yes 70870281
chr19 51318918 51318923 NFY TRANSFAC yes 113759351
chr19 51318933 51318944 USF1 JASPAR yes 70870282
chr19 51318933 51318944 USF2 JASPAR yes 70870283
chr19 51318933 51318944 USF1 JASPAR yes 113759352
chr19 51318933 51318944 USF2 JASPAR yes 113759353
chr19 51318934 51318944 MLXIPL JASPAR yes 70870284
chr19 51318934 51318944 SREBF2 JASPAR yes 70870285
chr19 51318934 51318944 TFE3 JASPAR yes 70870286
chr19 51318934 51318944 TFEB JASPAR yes 70870287
chr19 51318934 51318944 TFEC JASPAR yes 70870288
chr19 51318934 51318944 MLXIPL JASPAR yes 113759354
chr19 51318934 51318944 SREBF2 JASPAR yes 113759355
chr19 51318934 51318944 TFE3 JASPAR yes 113759356
chr19 51318934 51318944 TFEB JASPAR yes 113759357
chr19 51318934 51318944 TFEC JASPAR yes 113759358
chr19 51318939 51318952 DUXA JASPAR yes 70870289
chr19 51318939 51318952 DUXA JASPAR yes 113759359
SNP sites on vista29826[chr19:51318804-51318947]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29826[chr19:51318804-51318947]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 51165084 51222707 - SHANK1 ENSG00000161681.11 51222707 0.95 1.0 17888 3903
chr19 51226586 51228974 + CLEC11A ENSG00000105472.8 51226586 0.81 1.0 17889 7782
chr19 51273721 51274989 + GPR32 ENSG00000142511.4 51273721 0.98 0.0 17890 54917
chr19 51293672 51298481 + ACPT ENSG00000142513.4 51293672 0.8 1.0 17891 74868
chr19 51300961 51308186 - C19orf48 ENSG00000167747.9 51308186 0.9 1.0 17892 89382
chr19 51322404 51327043 - KLK1 ENSG00000167748.6 51327043 1.0 1.0 17893 91904
chr19 51328545 51340469 - KLK15 ENSG00000174562.9 51340469 0.94 1.0 17894 78478
chr19 51358171 51364020 + KLK3 ENSG00000142515.10 51358171 0.89 1.0 17895 60776
chr19 51364824 51383823 + KLK2 ENSG00000167751.8 51364824 0.98 0.82 17896 54123
chr19 51377552 51378040 - AC037199.1 ENSG00000267880.1 51378040 0.0 0.0 17897 40907
chr19 51409608 51413994 - KLK4 ENSG00000167749.7 51413994 0.98 1.0 17898 4953
Expression level of Genes
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miRNAs possibly regulated by vista29826[chr19:51318804-51318947]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results