EnhancerDB
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  3. vista29849[chr19:51938637-51939150]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29849[chr19:51938637-51939150]
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Tissue distribution of vista29849
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Transcription factor that possibly regulate vista29849[chr19:51938637-51939150]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 51938642 51938656 GLIS3 JASPAR yes 70871218
chr19 51938656 51938672 SRF JASPAR yes 70871219
chr19 51938659 51938671 SRF JASPAR yes 70871220
chr19 51938662 51938666 TEAD2 TRANSFAC yes 70871221
chr19 51938667 51938671 LFA1 TRANSFAC yes 70871222
chr19 51938719 51938723 LFA1 TRANSFAC yes 70871223
chr19 51938757 51938771 CREB3 JASPAR yes 70871224
chr19 51938759 51938769 MNT JASPAR yes 70871225
chr19 51938759 51938770 USF1 JASPAR yes 70871226
chr19 51938760 51938767 USF1 JASPAR yes 70871227
chr19 51938760 51938770 MAX JASPAR yes 70871228
chr19 51938761 51938766 MYC TRANSFAC yes 70871229
chr19 51938761 51938766 USF1 TRANSFAC yes 70871230
chr19 51938761 51938766 USF2 TRANSFAC yes 70871231
chr19 51938761 51938768 USF1 JASPAR yes 70871232
chr19 51938791 51938805 IRF7 JASPAR yes 70871233
chr19 51938792 51938807 PRDM1 JASPAR yes 70871234
chr19 51938792 51938807 STAT2 JASPAR yes 70871235
chr19 51938806 51938815 JDP2 JASPAR yes 70871236
chr19 51938813 51938824 YY2 JASPAR yes 70871237
chr19 51938813 51938827 E2F7 JASPAR yes 70871238
chr19 51938815 51938826 E2F1 JASPAR yes 70871239
chr19 51938844 51938857 NFKB1 JASPAR yes 70871240
chr19 51938844 51938857 NFKB2 JASPAR yes 70871241
chr19 51938845 51938855 NFKB1 JASPAR yes 70871242
chr19 51938845 51938856 NFKB1 JASPAR yes 70871243
chr19 51938846 51938856 NFKB1 JASPAR yes 70871244
chr19 51938846 51938856 RELA JASPAR yes 70871245
chr19 51938846 51938856 REL JASPAR yes 70871246
chr19 51938846 51938857 NFKB1 JASPAR yes 70871247
chr19 51938866 51938878 PBX1 JASPAR yes 70871248
chr19 51938891 51938895 NFE TRANSFAC yes 70871249
chr19 51938926 51938939 DUXA JASPAR yes 70871250
chr19 51938927 51938938 DUX4 JASPAR yes 70871251
chr19 51938927 51938938 PHOX2A JASPAR yes 70871252
chr19 51938927 51938938 PROP1 JASPAR yes 70871253
chr19 51938930 51938940 ALX3 JASPAR yes 70871254
chr19 51938950 51938967 ZNF410 JASPAR yes 70871255
chr19 51938959 51938969 MAX JASPAR yes 70871256
chr19 51938960 51938970 CLOCK JASPAR yes 70871257
chr19 51938960 51938970 MAX JASPAR yes 70871258
chr19 51938960 51938970 MNT JASPAR yes 70871259
chr19 51938962 51938967 MYC TRANSFAC yes 70871260
chr19 51938962 51938967 USF1 TRANSFAC yes 70871261
chr19 51938962 51938967 USF2 TRANSFAC yes 70871262
chr19 51938962 51938969 USF1 JASPAR yes 70871263
chr19 51938975 51938988 DUXA JASPAR yes 70871264
chr19 51938976 51938987 DUX4 JASPAR yes 70871265
chr19 51938988 51938993 SP1 TRANSFAC yes 70871266
chr19 51938990 51938995 TFAP2A TRANSFAC yes 70871267
chr19 51938990 51938996 MZF1 JASPAR yes 70871268
chr19 51939016 51939024 HOXA5 JASPAR yes 70871269
chr19 51939032 51939036 H4TF2 TRANSFAC yes 70871270
chr19 51939034 51939040 MZF1 JASPAR yes 70871271
chr19 51939037 51939048 GCM1 JASPAR yes 70871272
chr19 51939042 51939055 NR2F1 JASPAR yes 70871273
chr19 51939052 51939063 DMRT3 JASPAR yes 70871274
chr19 51939054 51939066 TEF JASPAR yes 70871275
chr19 51939056 51939059 MYB TRANSFAC yes 70871276
chr19 51939056 51939067 PHOX2A JASPAR yes 70871277
chr19 51939056 51939067 PROP1 JASPAR yes 70871278
chr19 51939059 51939069 EMX1 JASPAR yes 70871279
chr19 51939059 51939069 EVX1 JASPAR yes 70871280
chr19 51939059 51939069 EVX2 JASPAR yes 70871281
chr19 51939059 51939069 HOXA2 JASPAR yes 70871282
chr19 51939059 51939069 MEOX1 JASPAR yes 70871283
chr19 51939059 51939069 MEOX2 JASPAR yes 70871284
chr19 51939060 51939070 POU6F2 JASPAR yes 70871285
chr19 51939127 51939139 E2F8 JASPAR yes 70871286
chr19 51939134 51939148 FOXF2 JASPAR yes 70871287
chr19 51939136 51939147 FOXC1 JASPAR yes 70871288
chr19 51939136 51939148 FOXC2 JASPAR yes 70871289
chr19 51939137 51939149 FOXI1 JASPAR yes 70871290
chr19 51939139 51939147 FOXG1 JASPAR yes 70871291
SNP sites on vista29849[chr19:51938637-51939150]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29849[chr19:51938637-51939150]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 51834790 51845378 - VSIG10L ENSG00000186806.5 51845378 0.97 1.0 17916 6741
chr19 51848423 51869672 - ETFB ENSG00000105379.5 51869672 0.92 0.98 17917 31035
chr19 51853627 51871353 - CTD-2616J11.11 ENSG00000269403.1 51871353 0.94 0.76 17918 32716
chr19 51870352 51872257 - CLDND2 ENSG00000160318.2 51872257 0.65 0.99 17919 33620
chr19 51874860 51875969 - NKG7 ENSG00000105374.5 51875969 0.93 1.0 17920 37332
chr19 51883163 51891214 - LIM2 ENSG00000105370.3 51891214 0.92 1.0 17921 52577
chr19 51891543 51893828 - CTD-2616J11.4 ENSG00000262874.1 51893828 0.94 1.0 17922 55191
chr19 51913275 51921057 - SIGLEC10 ENSG00000142512.10 51921057 0.98 0.93 17923 82420
chr19 51954101 51961710 - SIGLEC8 ENSG00000105366.11 51961710 0.95 0.99 17924 77440
chr19 51979838 51994206 + CEACAM18 ENSG00000213822.5 51979838 1.0 1.0 17925 59312
chr19 51994611 52005043 - SIGLEC12 ENSG00000254521.2 52005043 0.99 1.0 17926 34107
chr19 52022779 52035110 - SIGLEC6 ENSG00000105492.11 52035110 0.99 1.0 17927 4040
Expression level of Genes
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miRNAs possibly regulated by vista29849[chr19:51938637-51939150]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results