EnhancerDB
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  3. vista29853[chr19:51964906-51965339]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29853[chr19:51964906-51965339]
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Tissue distribution of vista29853
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Transcription factor that possibly regulate vista29853[chr19:51964906-51965339]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 51964914 51964924 NFKB1 JASPAR yes 70871443
chr19 51964915 51964926 ELK4 JASPAR yes 70871444
chr19 51964915 51964926 FLI1 JASPAR yes 70871445
chr19 51964936 51964941 GATA2 JASPAR yes 70871446
chr19 51964948 51964962 ZIC1 JASPAR yes 70871447
chr19 51964948 51964963 ZIC3 JASPAR yes 70871448
chr19 51964948 51964963 ZIC4 JASPAR yes 70871449
chr19 51964950 51964963 TFAP2A JASPAR yes 70871450
chr19 51964950 51964963 TFAP2B JASPAR yes 70871451
chr19 51964950 51964963 TFAP2C JASPAR yes 70871452
chr19 51964957 51964962 TFAP2A TRANSFAC yes 70871453
chr19 51964957 51964963 MZF1 JASPAR yes 70871454
chr19 51964961 51964975 RORA JASPAR yes 70871455
chr19 51964964 51964974 RORA JASPAR yes 70871456
chr19 51964966 51964984 ESR1 JASPAR yes 70871457
chr19 51964968 51964983 ESR2 JASPAR yes 70871458
chr19 51964969 51964973 ESR1 TRANSFAC yes 70871459
chr19 51964970 51964980 SREBF2 JASPAR yes 70871460
chr19 51964980 51964988 SP1 TRANSFAC yes 70871461
chr19 51964993 51965000 SPIB JASPAR yes 70871462
chr19 51964996 51965011 TFAP2A JASPAR yes 70871463
chr19 51964996 51965011 TFAP2C JASPAR yes 70871464
chr19 51964998 51965013 TFAP2C JASPAR yes 70871465
chr19 51964999 51965010 TFAP2A JASPAR yes 70871466
chr19 51965017 51965026 THAP1 JASPAR yes 70871467
chr19 51965030 51965034 LFA1 TRANSFAC yes 70871468
chr19 51965094 51965108 GLIS2 JASPAR yes 70871469
chr19 51965094 51965108 GLIS3 JASPAR yes 70871470
chr19 51965100 51965110 GABPA JASPAR yes 70871471
chr19 51965100 51965111 FLI1 JASPAR yes 70871472
chr19 51965105 51965120 TFAP2A JASPAR yes 70871473
chr19 51965105 51965120 TFAP2C JASPAR yes 70871474
chr19 51965106 51965117 TFAP2A JASPAR yes 70871475
chr19 51965106 51965117 TFAP2B JASPAR yes 70871476
chr19 51965106 51965117 TFAP2C JASPAR yes 70871477
chr19 51965106 51965118 INSM1 JASPAR yes 70871478
chr19 51965106 51965118 TFAP2A JASPAR yes 70871479
chr19 51965106 51965118 TFAP2B JASPAR yes 70871480
chr19 51965107 51965116 TFAP2A JASPAR yes 70871481
chr19 51965130 51965133 MYB TRANSFAC yes 70871482
chr19 51965133 51965148 RUNX2 JASPAR yes 70871483
chr19 51965134 51965144 RUNX3 JASPAR yes 70871484
chr19 51965134 51965145 RUNX1 JASPAR yes 70871485
chr19 51965140 51965154 SPI1 JASPAR yes 70871486
chr19 51965145 51965160 HNF4A JASPAR yes 70871487
chr19 51965146 51965161 HNF4G JASPAR yes 70871488
chr19 51965169 51965190 REST JASPAR yes 70871489
chr19 51965170 51965189 REST JASPAR yes 70871490
chr19 51965173 51965177 NFE TRANSFAC yes 70871491
chr19 51965186 51965191 TFAP2A TRANSFAC yes 70871492
chr19 51965186 51965192 MZF1 JASPAR yes 70871493
chr19 51965197 51965201 YY1 TRANSFAC yes 70871494
chr19 51965222 51965234 GLI2 JASPAR yes 70871495
chr19 51965235 51965250 ZIC3 JASPAR yes 70871496
chr19 51965235 51965250 ZIC4 JASPAR yes 70871497
chr19 51965236 51965250 ZIC1 JASPAR yes 70871498
chr19 51965256 51965269 ZBTB18 JASPAR yes 70871499
chr19 51965257 51965267 NHLH1 JASPAR yes 70871500
chr19 51965273 51965282 THAP1 JASPAR yes 70871501
chr19 51965284 51965295 E2F6 JASPAR yes 70871502
chr19 51965301 51965305 NFE TRANSFAC yes 70871503
chr19 51965313 51965318 ETS2 TRANSFAC yes 70871504
chr19 51965320 51965335 AR JASPAR yes 70871505
chr19 51965329 51965333 NFE TRANSFAC yes 70871506
chr19 51965334 51965338 YY1 TRANSFAC yes 70871507
SNP sites on vista29853[chr19:51964906-51965339]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29853[chr19:51964906-51965339]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 51848423 51869672 - ETFB ENSG00000105379.5 51869672 0.92 0.98 17917 4766
chr19 51853627 51871353 - CTD-2616J11.11 ENSG00000269403.1 51871353 0.94 0.76 17918 6447
chr19 51870352 51872257 - CLDND2 ENSG00000160318.2 51872257 0.65 0.99 17919 7351
chr19 51874860 51875969 - NKG7 ENSG00000105374.5 51875969 0.93 1.0 17920 11063
chr19 51883163 51891214 - LIM2 ENSG00000105370.3 51891214 0.92 1.0 17921 26308
chr19 51891543 51893828 - CTD-2616J11.4 ENSG00000262874.1 51893828 0.94 1.0 17922 28922
chr19 51913275 51921057 - SIGLEC10 ENSG00000142512.10 51921057 0.98 0.93 17923 56151
chr19 51954101 51961710 - SIGLEC8 ENSG00000105366.11 51961710 0.95 0.99 17924 96804
chr19 51979838 51994206 + CEACAM18 ENSG00000213822.5 51979838 1.0 1.0 17925 85501
chr19 51994611 52005043 - SIGLEC12 ENSG00000254521.2 52005043 0.99 1.0 17926 60296
chr19 52022779 52035110 - SIGLEC6 ENSG00000105492.11 52035110 0.99 1.0 17927 30229
Expression level of Genes
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miRNAs possibly regulated by vista29853[chr19:51964906-51965339]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results