EnhancerDB
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  3. vista29860[chr19:52049983-52050318]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29860[chr19:52049983-52050318]
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Tissue distribution of vista29860
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Transcription factor that possibly regulate vista29860[chr19:52049983-52050318]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52049796 52050580 POLR2A UCSC Txn Factor no Conserved 108425933
chr19 52049809 52050314 MYC UCSC Txn Factor no Conserved 108425934
chr19 52049870 52050420 GATA2 UCSC Txn Factor no Conserved 108425938
chr19 52049882 52050283 EP300 UCSC Txn Factor no Conserved 108425942
chr19 52049897 52050547 GATA1 UCSC Txn Factor no Conserved 108425943
chr19 52049910 52050288 MAX UCSC Txn Factor no Conserved 108425944
chr19 52049912 52050324 JUND UCSC Txn Factor no Conserved 108425947
chr19 52049917 52050193 CEBPB UCSC Txn Factor no Conserved 108425949
chr19 52049922 52050351 TBL1XR1 UCSC Txn Factor no Conserved 108425953
chr19 52049938 52050281 TEAD4 UCSC Txn Factor no Conserved 108425957
chr19 52049943 52050243 STAT5A UCSC Txn Factor no Conserved 108425959
chr19 52049994 52050281 PML UCSC Txn Factor no Conserved 108425972
chr19 52049995 52050283 TAL1 UCSC Txn Factor no Conserved 108425974
chr19 52050002 52050244 NR2F2 UCSC Txn Factor no Conserved 108425977
chr19 52050012 52050290 CCNT2 UCSC Txn Factor no Conserved 108425982
chr19 52050015 52050268 FOS UCSC Txn Factor no Conserved 108425985
chr19 52050075 52050256 FOSL1 UCSC Txn Factor no Conserved 108425998
chr19 52050077 52050248 ATF3 UCSC Txn Factor no Conserved 108426001
chr19 52049977 52049987 MSC JASPAR yes 70871728
chr19 52049977 52049987 MSC JASPAR yes 113777548
chr19 52049978 52049991 SCRT2 JASPAR yes 70871729
chr19 52049978 52049991 SCRT2 JASPAR yes 113777549
chr19 52049988 52049997 SOX9 JASPAR yes 70871730
chr19 52049988 52049997 SOX9 JASPAR yes 113777550
chr19 52050000 52050005 ETS2 TRANSFAC yes 70871731
chr19 52050000 52050005 ETS2 TRANSFAC yes 113777551
chr19 52050017 52050032 PRDM1 JASPAR yes 70871732
chr19 52050017 52050032 PRDM1 JASPAR yes 113777552
chr19 52050022 52050040 NR3C1 JASPAR yes 70871733
chr19 52050022 52050040 NR3C1 JASPAR yes 113777553
chr19 52050038 52050053 STAT1 JASPAR yes 70871734
chr19 52050038 52050053 STAT1 JASPAR yes 113777554
chr19 52050040 52050051 STAT1 JASPAR yes 70871735
chr19 52050040 52050051 STAT1 JASPAR yes 113777555
chr19 52050058 52050073 AR JASPAR yes 70871736
chr19 52050058 52050073 AR JASPAR yes 113777556
chr19 52050063 52050081 RARA JASPAR yes 70871737
chr19 52050063 52050081 RARA JASPAR yes 113777557
chr19 52050090 52050109 PAX5 JASPAR yes 70871738
chr19 52050090 52050109 PAX5 JASPAR yes 113777558
chr19 52050091 52050102 NFE2L2 JASPAR yes 70871739
chr19 52050091 52050102 NFE2L2 JASPAR yes 113777559
chr19 52050094 52050105 BATF JASPAR yes 70871740
chr19 52050094 52050105 BATF JASPAR yes 113777560
chr19 52050103 52050114 TBX20 JASPAR yes 70871741
chr19 52050103 52050114 TBX20 JASPAR yes 113777561
chr19 52050105 52050108 MYB TRANSFAC yes 70871742
chr19 52050105 52050108 MYB TRANSFAC yes 113777562
chr19 52050121 52050136 RUNX2 JASPAR yes 70871743
chr19 52050121 52050136 RUNX2 JASPAR yes 113777563
chr19 52050122 52050131 RUNX2 JASPAR yes 70871744
chr19 52050122 52050131 RUNX2 JASPAR yes 113777564
chr19 52050122 52050132 RUNX3 JASPAR yes 70871745
chr19 52050122 52050132 RUNX3 JASPAR yes 113777565
chr19 52050154 52050168 GATA2 JASPAR yes 70871746
chr19 52050154 52050168 GATA2 JASPAR yes 113777566
chr19 52050156 52050164 GATA3 JASPAR yes 70871747
chr19 52050156 52050164 GATA5 JASPAR yes 70871748
chr19 52050156 52050164 GATA3 JASPAR yes 113777567
chr19 52050156 52050164 GATA5 JASPAR yes 113777568
chr19 52050174 52050188 JUN JASPAR yes 70871749
chr19 52050174 52050188 JUN JASPAR yes 113777569
chr19 52050177 52050188 FOSL2 JASPAR yes 70871750
chr19 52050177 52050188 JUNB JASPAR yes 70871751
chr19 52050177 52050188 FOSL2 JASPAR yes 113777570
chr19 52050177 52050188 JUNB JASPAR yes 113777571
chr19 52050178 52050189 FOS JASPAR yes 70871752
chr19 52050178 52050189 FOSL1 JASPAR yes 70871753
chr19 52050178 52050189 JUND JASPAR yes 70871754
chr19 52050178 52050189 NFE2 JASPAR yes 70871755
chr19 52050178 52050189 FOS JASPAR yes 113777572
chr19 52050178 52050189 FOSL1 JASPAR yes 113777573
chr19 52050178 52050189 JUND JASPAR yes 113777574
chr19 52050178 52050189 NFE2 JASPAR yes 113777575
chr19 52050179 52050186 JUN TRANSFAC yes 70871756
chr19 52050179 52050186 JUN TRANSFAC yes 113777576
chr19 52050179 52050188 JDP2 JASPAR yes 70871757
chr19 52050179 52050188 JDP2 JASPAR yes 113777577
chr19 52050179 52050190 FOSL2 JASPAR yes 70871758
chr19 52050179 52050190 JUNB JASPAR yes 70871759
chr19 52050179 52050190 FOSL2 JASPAR yes 113777578
chr19 52050179 52050190 JUNB JASPAR yes 113777579
chr19 52050179 52050193 JUN JASPAR yes 70871760
chr19 52050179 52050193 JUN JASPAR yes 113777580
chr19 52050180 52050191 BATF JASPAR yes 70871761
chr19 52050180 52050191 BATF JASPAR yes 113777581
chr19 52050190 52050210 RREB1 JASPAR yes 70871762
chr19 52050190 52050210 RREB1 JASPAR yes 113777582
chr19 52050283 52050298 FOXP1 JASPAR yes 70871763
chr19 52050283 52050298 FOXP1 JASPAR yes 113777583
chr19 52050286 52050300 ONECUT3 JASPAR yes 70871764
chr19 52050286 52050300 ONECUT3 JASPAR yes 113777584
chr19 52050288 52050297 SRY JASPAR yes 70871765
chr19 52050288 52050297 SRY JASPAR yes 113777585
chr19 52050290 52050299 SOX9 JASPAR yes 70871766
chr19 52050290 52050299 SOX9 JASPAR yes 113777586
chr19 52050294 52050307 POU3F3 JASPAR yes 70871767
chr19 52050294 52050307 POU3F3 JASPAR yes 113777587
chr19 52050294 52050308 FOXF2 JASPAR yes 70871768
chr19 52050294 52050308 FOXF2 JASPAR yes 113777588
chr19 52050294 52050309 FOXP1 JASPAR yes 70871769
chr19 52050294 52050309 FOXP1 JASPAR yes 113777589
chr19 52050295 52050310 FOXA1 JASPAR yes 70871770
chr19 52050295 52050310 FOXA1 JASPAR yes 113777590
chr19 52050296 52050307 FOXB1 JASPAR yes 70871771
chr19 52050296 52050307 FOXC1 JASPAR yes 70871772
chr19 52050296 52050307 FOXB1 JASPAR yes 113777591
chr19 52050296 52050307 FOXC1 JASPAR yes 113777592
chr19 52050296 52050308 FOXC2 JASPAR yes 70871773
chr19 52050296 52050308 FOXC2 JASPAR yes 113777593
SNP sites on vista29860[chr19:52049983-52050318]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29860[chr19:52049983-52050318]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 51954101 51961710 - SIGLEC8 ENSG00000105366.11 51961710 0.95 0.99 17924 11727
chr19 51979838 51994206 + CEACAM18 ENSG00000213822.5 51979838 1.0 1.0 17925 29855
chr19 51994611 52005043 - SIGLEC12 ENSG00000254521.2 52005043 0.99 1.0 17926 55060
chr19 52022779 52035110 - SIGLEC6 ENSG00000105492.11 52035110 0.99 1.0 17927 85127
chr19 52074551 52092991 + ZNF175 ENSG00000105497.3 52074551 0.76 0.99 17928 75767
chr19 52095036 52097630 - AC018755.1 ENSG00000167765.3 52097630 0.73 1.0 17929 52688
chr19 52114781 52150151 - SIGLEC5 ENSG00000105501.7 52150151 0.97 0.96 17930 167
chr19 52115344 52150142 - SIGLEC5 ENSG00000268500.1 52150142 0.97 1.0 17931 176
chr19 52145806 52150054 - SIGLEC14 ENSG00000254415.3 52150054 0.97 0.96 17932 264
Expression level of Genes
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miRNAs possibly regulated by vista29860[chr19:52049983-52050318]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results