EnhancerDB
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  3. vista29868[chr19:52124472-52124738]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29868[chr19:52124472-52124738]
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Tissue distribution of vista29868
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Transcription factor that possibly regulate vista29868[chr19:52124472-52124738]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52124486 52124771 RUNX3 UCSC Txn Factor no Conserved 108426133
chr19 52124508 52124804 SPI1 UCSC Txn Factor no Conserved 108426140
chr19 52124464 52124477 NFKB1 JASPAR yes 70872004
chr19 52124464 52124477 NFKB1 JASPAR yes 113780243
chr19 52124466 52124476 NFKB1 JASPAR yes 70872005
chr19 52124466 52124476 NFKB1 JASPAR yes 113780244
chr19 52124478 52124483 ETS2 TRANSFAC yes 70872006
chr19 52124478 52124483 ETS2 TRANSFAC yes 113780245
chr19 52124483 52124495 NHLH1 JASPAR yes 70872007
chr19 52124483 52124495 NHLH1 JASPAR yes 113780246
chr19 52124484 52124494 NHLH1 JASPAR yes 70872008
chr19 52124484 52124494 NHLH1 JASPAR yes 113780247
chr19 52124499 52124510 DUX4 JASPAR yes 70872009
chr19 52124499 52124510 DUX4 JASPAR yes 113780248
chr19 52124511 52124532 IRF1 JASPAR yes 70872010
chr19 52124511 52124532 IRF1 JASPAR yes 113780249
chr19 52124515 52124530 PRDM1 JASPAR yes 70872011
chr19 52124515 52124530 PRDM1 JASPAR yes 113780250
chr19 52124517 52124538 IRF1 JASPAR yes 70872012
chr19 52124517 52124538 IRF1 JASPAR yes 113780251
chr19 52124521 52124535 SPI1 JASPAR yes 70872013
chr19 52124521 52124535 SPI1 JASPAR yes 113780252
chr19 52124539 52124548 NFIX JASPAR yes 70872014
chr19 52124539 52124548 NFIX JASPAR yes 113780253
chr19 52124539 52124549 NFIA JASPAR yes 70872015
chr19 52124539 52124549 NFIA JASPAR yes 113780254
chr19 52124541 52124547 NFIC JASPAR yes 70872016
chr19 52124541 52124547 NFIC JASPAR yes 113780255
chr19 52124545 52124559 E2F7 JASPAR yes 70872017
chr19 52124545 52124559 E2F7 JASPAR yes 113780256
chr19 52124549 52124554 SP1 TRANSFAC yes 70872018
chr19 52124549 52124554 SP1 TRANSFAC yes 113780257
chr19 52124549 52124570 IRF1 JASPAR yes 70872019
chr19 52124549 52124570 IRF1 JASPAR yes 113780258
chr19 52124551 52124556 TFAP2A TRANSFAC yes 70872020
chr19 52124551 52124556 TFAP2A TRANSFAC yes 113780259
chr19 52124551 52124557 MZF1 JASPAR yes 70872021
chr19 52124551 52124557 MZF1 JASPAR yes 113780260
chr19 52124553 52124567 STAT1 JASPAR yes 70872022
chr19 52124553 52124567 STAT1 JASPAR yes 113780261
chr19 52124553 52124568 PRDM1 JASPAR yes 70872023
chr19 52124553 52124568 STAT2 JASPAR yes 70872024
chr19 52124553 52124568 PRDM1 JASPAR yes 113780262
chr19 52124553 52124568 STAT2 JASPAR yes 113780263
chr19 52124553 52124571 IRF2 JASPAR yes 70872025
chr19 52124553 52124571 IRF2 JASPAR yes 113780264
chr19 52124554 52124566 IRF1 JASPAR yes 70872026
chr19 52124554 52124566 IRF1 JASPAR yes 113780265
chr19 52124558 52124564 TCF4 TRANSFAC yes 70872027
chr19 52124558 52124564 TCF4 TRANSFAC yes 113780266
chr19 52124566 52124569 MYB TRANSFAC yes 70872028
chr19 52124566 52124569 MYB TRANSFAC yes 113780267
chr19 52124602 52124611 THAP1 JASPAR yes 70872029
chr19 52124602 52124611 THAP1 JASPAR yes 113780268
chr19 52124615 52124626 TBX2 JASPAR yes 70872030
chr19 52124615 52124626 TBX2 JASPAR yes 113780269
chr19 52124616 52124624 MGA JASPAR yes 70872031
chr19 52124616 52124624 TBX15 JASPAR yes 70872032
chr19 52124616 52124624 TBX1 JASPAR yes 70872033
chr19 52124616 52124624 TBX4 JASPAR yes 70872034
chr19 52124616 52124624 TBX5 JASPAR yes 70872035
chr19 52124616 52124624 MGA JASPAR yes 113780270
chr19 52124616 52124624 TBX15 JASPAR yes 113780271
chr19 52124616 52124624 TBX1 JASPAR yes 113780272
chr19 52124616 52124624 TBX4 JASPAR yes 113780273
chr19 52124616 52124624 TBX5 JASPAR yes 113780274
chr19 52124616 52124626 TBR1 JASPAR yes 70872036
chr19 52124616 52124626 TBR1 JASPAR yes 113780275
chr19 52124628 52124638 ELK1 JASPAR yes 70872037
chr19 52124628 52124638 ELK3 JASPAR yes 70872038
chr19 52124628 52124638 ERG JASPAR yes 70872039
chr19 52124628 52124638 ETV1 JASPAR yes 70872040
chr19 52124628 52124638 ETV3 JASPAR yes 70872041
chr19 52124628 52124638 ETV4 JASPAR yes 70872042
chr19 52124628 52124638 ETV5 JASPAR yes 70872043
chr19 52124628 52124638 FEV JASPAR yes 70872044
chr19 52124628 52124638 FLI1 JASPAR yes 70872045
chr19 52124628 52124638 GABPA JASPAR yes 70872046
chr19 52124628 52124638 ELK1 JASPAR yes 113780276
chr19 52124628 52124638 ELK3 JASPAR yes 113780277
chr19 52124628 52124638 ERG JASPAR yes 113780278
chr19 52124628 52124638 ETV1 JASPAR yes 113780279
chr19 52124628 52124638 ETV3 JASPAR yes 113780280
chr19 52124628 52124638 ETV4 JASPAR yes 113780281
chr19 52124628 52124638 ETV5 JASPAR yes 113780282
chr19 52124628 52124638 FEV JASPAR yes 113780283
chr19 52124628 52124638 FLI1 JASPAR yes 113780284
chr19 52124628 52124638 GABPA JASPAR yes 113780285
chr19 52124630 52124636 ETS1 JASPAR yes 70872047
chr19 52124630 52124636 SPI1 JASPAR yes 70872048
chr19 52124630 52124636 ETS1 JASPAR yes 113780286
chr19 52124630 52124636 SPI1 JASPAR yes 113780287
chr19 52124641 52124652 DUX4 JASPAR yes 70872049
chr19 52124641 52124652 DUX4 JASPAR yes 113780288
chr19 52124665 52124676 FLI1 JASPAR yes 70872050
chr19 52124665 52124676 FLI1 JASPAR yes 113780289
chr19 52124665 52124682 BCL6B JASPAR yes 70872051
chr19 52124665 52124682 BCL6B JASPAR yes 113780290
chr19 52124666 52124676 ETV6 JASPAR yes 70872052
chr19 52124666 52124676 ETV6 JASPAR yes 113780291
chr19 52124667 52124674 SPI1 JASPAR yes 70872053
chr19 52124667 52124674 SPI1 JASPAR yes 113780292
chr19 52124667 52124675 EHF JASPAR yes 70872054
chr19 52124667 52124675 EHF JASPAR yes 113780293
chr19 52124677 52124695 MAFF JASPAR yes 70872055
chr19 52124677 52124695 MAFF JASPAR yes 113780294
chr19 52124679 52124700 MAFG JASPAR yes 70872056
chr19 52124679 52124700 MAFG JASPAR yes 113780295
chr19 52124691 52124709 RARA JASPAR yes 70872057
chr19 52124691 52124709 RARA JASPAR yes 113780296
chr19 52124693 52124707 RORA JASPAR yes 70872058
chr19 52124693 52124707 RORA JASPAR yes 113780297
chr19 52124693 52124713 RREB1 JASPAR yes 70872059
chr19 52124693 52124713 RREB1 JASPAR yes 113780298
chr19 52124697 52124708 NFE2 JASPAR yes 70872060
chr19 52124697 52124708 NFE2 JASPAR yes 113780299
chr19 52124699 52124705 ESR1 TRANSFAC yes 70872061
chr19 52124699 52124705 ESR1 TRANSFAC yes 113780300
chr19 52124701 52124705 ESR1 TRANSFAC yes 70872062
chr19 52124701 52124705 ESR1 TRANSFAC yes 113780301
chr19 52124704 52124708 YY1 TRANSFAC yes 70872063
chr19 52124704 52124708 YY1 TRANSFAC yes 113780302
chr19 52124711 52124723 TGIF2 JASPAR yes 70872064
chr19 52124711 52124723 TGIF2 JASPAR yes 113780303
chr19 52124717 52124729 TAL1 JASPAR yes 70872065
chr19 52124717 52124729 TAL1 JASPAR yes 113780304
chr19 52124718 52124730 PKNOX1 JASPAR yes 70872066
chr19 52124718 52124730 PKNOX2 JASPAR yes 70872067
chr19 52124718 52124730 TGIF1 JASPAR yes 70872068
chr19 52124718 52124730 TGIF2 JASPAR yes 70872069
chr19 52124718 52124730 PKNOX1 JASPAR yes 113780305
chr19 52124718 52124730 PKNOX2 JASPAR yes 113780306
chr19 52124718 52124730 TGIF1 JASPAR yes 113780307
chr19 52124718 52124730 TGIF2 JASPAR yes 113780308
chr19 52124719 52124729 MYF6 JASPAR yes 70872070
chr19 52124719 52124729 NEUROG2 JASPAR yes 70872071
chr19 52124719 52124729 MYF6 JASPAR yes 113780309
chr19 52124719 52124729 NEUROG2 JASPAR yes 113780310
SNP sites on vista29868[chr19:52124472-52124738]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29868[chr19:52124472-52124738]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52022779 52035110 - SIGLEC6 ENSG00000105492.11 52035110 0.99 1.0 17927 10638
chr19 52074551 52092991 + ZNF175 ENSG00000105497.3 52074551 0.76 0.99 17928 50079
chr19 52095036 52097630 - AC018755.1 ENSG00000167765.3 52097630 0.73 1.0 17929 73158
chr19 52114781 52150151 - SIGLEC5 ENSG00000105501.7 52150151 0.97 0.96 17930 74587
chr19 52115344 52150142 - SIGLEC5 ENSG00000268500.1 52150142 0.97 1.0 17931 74596
chr19 52145806 52150054 - SIGLEC14 ENSG00000254415.3 52150054 0.97 0.96 17932 74684
Expression level of Genes
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miRNAs possibly regulated by vista29868[chr19:52124472-52124738]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results