EnhancerDB
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  3. vista29869[chr19:52154475-52154734]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29869[chr19:52154475-52154734]
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Tissue distribution of vista29869
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Transcription factor that possibly regulate vista29869[chr19:52154475-52154734]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52154500 52154754 SPI1 UCSC Txn Factor no Conserved 108426149
chr19 52154475 52154486 E2F6 JASPAR yes 70872072
chr19 52154479 52154484 ETS2 TRANSFAC yes 70872073
chr19 52154498 52154506 MGA JASPAR yes 70872074
chr19 52154498 52154506 TBX1 JASPAR yes 70872075
chr19 52154498 52154510 HES5 JASPAR yes 70872076
chr19 52154498 52154510 HES7 JASPAR yes 70872077
chr19 52154499 52154509 BHLHE40 JASPAR yes 70872078
chr19 52154499 52154509 BHLHE41 JASPAR yes 70872079
chr19 52154499 52154509 CLOCK JASPAR yes 70872080
chr19 52154499 52154509 HEY1 JASPAR yes 70872081
chr19 52154499 52154509 HEY2 JASPAR yes 70872082
chr19 52154499 52154509 MAX JASPAR yes 70872083
chr19 52154499 52154509 MNT JASPAR yes 70872084
chr19 52154499 52154509 TFE3 JASPAR yes 70872085
chr19 52154500 52154510 MAX JASPAR yes 70872086
chr19 52154501 52154506 MYC TRANSFAC yes 70872087
chr19 52154501 52154506 USF1 TRANSFAC yes 70872088
chr19 52154501 52154506 USF2 TRANSFAC yes 70872089
chr19 52154505 52154517 TFAP2C JASPAR yes 70872090
chr19 52154505 52154520 TFAP2A JASPAR yes 70872091
chr19 52154505 52154520 TFAP2C JASPAR yes 70872092
chr19 52154513 52154529 POU4F2 JASPAR yes 70872093
chr19 52154513 52154529 POU4F3 JASPAR yes 70872094
chr19 52154527 52154532 TFAP2A TRANSFAC yes 70872095
chr19 52154527 52154533 MZF1 JASPAR yes 70872096
chr19 52154542 52154552 RELA JASPAR yes 70872097
chr19 52154542 52154552 REL JASPAR yes 70872098
chr19 52154542 52154553 NFKB1 JASPAR yes 70872099
chr19 52154543 52154561 ESR1 JASPAR yes 70872100
chr19 52154581 52154591 FIGLA JASPAR yes 70872101
chr19 52154581 52154591 ID4 JASPAR yes 70872102
chr19 52154581 52154591 TCF3 JASPAR yes 70872103
chr19 52154581 52154591 TCF4 JASPAR yes 70872104
chr19 52154583 52154592 ZEB1 JASPAR yes 70872105
chr19 52154588 52154598 MZF1 JASPAR yes 70872106
chr19 52154590 52154600 ETV6 JASPAR yes 70872107
chr19 52154592 52154597 ETS2 TRANSFAC yes 70872108
chr19 52154595 52154609 NR2F1 JASPAR yes 70872109
chr19 52154604 52154624 ESR1 JASPAR yes 70872110
chr19 52154610 52154614 ESR1 TRANSFAC yes 70872111
chr19 52154610 52154631 IRF1 JASPAR yes 70872112
chr19 52154612 52154627 PRDM1 JASPAR yes 70872113
chr19 52154612 52154627 STAT2 JASPAR yes 70872114
chr19 52154628 52154643 TFAP2C JASPAR yes 70872115
chr19 52154630 52154642 INSM1 JASPAR yes 70872116
chr19 52154630 52154642 TFAP2A JASPAR yes 70872117
chr19 52154631 52154642 TFAP2A JASPAR yes 70872118
chr19 52154631 52154642 TFAP2B JASPAR yes 70872119
chr19 52154631 52154642 TFAP2C JASPAR yes 70872120
chr19 52154632 52154641 TFAP2A JASPAR yes 70872121
chr19 52154638 52154659 REST JASPAR yes 70872122
chr19 52154642 52154646 NFE TRANSFAC yes 70872123
chr19 52154645 52154666 IRF1 JASPAR yes 70872124
chr19 52154647 52154662 IRF9 JASPAR yes 70872125
chr19 52154649 52154663 STAT1 JASPAR yes 70872126
chr19 52154649 52154664 PRDM1 JASPAR yes 70872127
chr19 52154649 52154664 STAT2 JASPAR yes 70872128
chr19 52154649 52154667 IRF2 JASPAR yes 70872129
chr19 52154650 52154662 IRF1 JASPAR yes 70872130
chr19 52154660 52154669 NKX2-8 JASPAR yes 70872131
chr19 52154660 52154670 NKX2-3 JASPAR yes 70872132
chr19 52154671 52154692 ZNF263 JASPAR yes 70872133
chr19 52154678 52154699 ZNF263 JASPAR yes 70872134
chr19 52154682 52154692 SP1 JASPAR yes 70872135
chr19 52154684 52154689 SP1 TRANSFAC yes 70872136
chr19 52154684 52154690 SP1 TRANSFAC yes 70872137
chr19 52154684 52154691 SP1 TRANSFAC yes 70872138
chr19 52154685 52154697 INSM1 JASPAR yes 70872139
chr19 52154687 52154707 RREB1 JASPAR yes 70872140
chr19 52154692 52154698 ZNF354C JASPAR yes 70872141
chr19 52154694 52154715 ZNF263 JASPAR yes 70872142
chr19 52154708 52154714 NFE2 TRANSFAC yes 70872143
SNP sites on vista29869[chr19:52154475-52154734]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29869[chr19:52154475-52154734]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52074551 52092991 + ZNF175 ENSG00000105497.3 52074551 0.76 0.99 17928 20076
chr19 52095036 52097630 - AC018755.1 ENSG00000167765.3 52097630 0.73 1.0 17929 43155
chr19 52114781 52150151 - SIGLEC5 ENSG00000105501.7 52150151 0.97 0.96 17930 95676
chr19 52115344 52150142 - SIGLEC5 ENSG00000268500.1 52150142 0.97 1.0 17931 95667
chr19 52145806 52150054 - SIGLEC14 ENSG00000254415.3 52150054 0.97 0.96 17932 95579
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 27487
Expression level of Genes
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miRNAs possibly regulated by vista29869[chr19:52154475-52154734]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 52195909 52195930 + hsa-miR-99b-3p MIMAT0004678 52192634 0.04073653676377854 0.718804 0.708728 867
Expression level of miRNAs
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