EnhancerDB
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  3. vista2987[chr1:113525578-113525919]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2987[chr1:113525578-113525919]
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Tissue distribution of vista2987
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Transcription factor that possibly regulate vista2987[chr1:113525578-113525919]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 113525590 113525600 SREBF1 JASPAR yes 31603324
chr1 113525590 113525600 SREBF2 JASPAR yes 31603325
chr1 113525590 113525600 SREBF1 JASPAR yes 118353472
chr1 113525590 113525600 SREBF2 JASPAR yes 118353473
chr1 113525599 113525603 TEAD2 TRANSFAC yes 31603326
chr1 113525599 113525603 TEAD2 TRANSFAC yes 118353474
chr1 113525599 113525604 TBP TRANSFAC yes 31603327
chr1 113525599 113525604 TBP TRANSFAC yes 118353475
chr1 113525599 113525605 TMF TRANSFAC yes 31603328
chr1 113525599 113525605 TMF TRANSFAC yes 118353476
chr1 113525601 113525615 SPI1 JASPAR yes 31603329
chr1 113525601 113525615 SPIC JASPAR yes 31603330
chr1 113525601 113525615 SPI1 JASPAR yes 118353477
chr1 113525601 113525615 SPIC JASPAR yes 118353478
chr1 113525605 113525610 TFAP2A TRANSFAC yes 31603331
chr1 113525605 113525610 TFAP2A TRANSFAC yes 118353479
chr1 113525605 113525611 MZF1 JASPAR yes 31603332
chr1 113525605 113525611 MZF1 JASPAR yes 118353480
chr1 113525607 113525612 ETS2 TRANSFAC yes 31603333
chr1 113525607 113525612 ETS2 TRANSFAC yes 118353481
chr1 113525615 113525632 RXRA JASPAR yes 31603334
chr1 113525615 113525632 RXRA JASPAR yes 118353482
chr1 113525624 113525635 ESRRA JASPAR yes 31603335
chr1 113525624 113525635 ESRRB JASPAR yes 31603336
chr1 113525624 113525635 ESRRA JASPAR yes 118353483
chr1 113525624 113525635 ESRRB JASPAR yes 118353484
chr1 113525625 113525633 NR4A2 JASPAR yes 31603337
chr1 113525625 113525633 NR4A2 JASPAR yes 118353485
chr1 113525626 113525636 RORA JASPAR yes 31603338
chr1 113525626 113525636 RORA JASPAR yes 118353486
chr1 113525677 113525687 MAX JASPAR yes 31603339
chr1 113525677 113525687 MAX JASPAR yes 118353487
chr1 113525682 113525693 NFE2L2 JASPAR yes 31603340
chr1 113525682 113525693 NFE2L2 JASPAR yes 118353488
chr1 113525684 113525690 SOX10 JASPAR yes 31603341
chr1 113525684 113525690 SOX10 JASPAR yes 118353489
chr1 113525685 113525697 IRF1 JASPAR yes 31603342
chr1 113525685 113525697 IRF1 JASPAR yes 118353490
chr1 113525689 113525706 BCL6B JASPAR yes 31603343
chr1 113525689 113525706 BCL6B JASPAR yes 118353491
chr1 113525690 113525707 BCL6B JASPAR yes 31603344
chr1 113525690 113525707 BCL6B JASPAR yes 118353492
chr1 113525763 113525773 GCM2 JASPAR yes 31603345
chr1 113525763 113525773 GCM2 JASPAR yes 118353493
chr1 113525763 113525774 GCM1 JASPAR yes 31603346
chr1 113525763 113525774 GCM1 JASPAR yes 118353494
chr1 113525769 113525784 PRDM1 JASPAR yes 31603347
chr1 113525769 113525784 PRDM1 JASPAR yes 118353495
chr1 113525782 113525786 H4TF2 TRANSFAC yes 31603348
chr1 113525782 113525786 H4TF2 TRANSFAC yes 118353496
chr1 113525786 113525790 H1TF2 TRANSFAC yes 31603349
chr1 113525786 113525790 NFE TRANSFAC yes 31603350
chr1 113525786 113525790 SRF TRANSFAC yes 31603351
chr1 113525786 113525790 H1TF2 TRANSFAC yes 118353497
chr1 113525786 113525790 NFE TRANSFAC yes 118353498
chr1 113525786 113525790 SRF TRANSFAC yes 118353499
chr1 113525790 113525805 MAFK JASPAR yes 31603352
chr1 113525790 113525805 MAFK JASPAR yes 118353500
chr1 113525799 113525803 YY1 TRANSFAC yes 31603353
chr1 113525799 113525803 YY1 TRANSFAC yes 118353501
chr1 113525839 113525850 HOXA10 JASPAR yes 31603354
chr1 113525839 113525850 HOXA10 JASPAR yes 118353502
chr1 113525840 113525850 HOXD13 JASPAR yes 31603355
chr1 113525840 113525850 HOXD13 JASPAR yes 118353503
chr1 113525848 113525862 TLX1 JASPAR yes 31603356
chr1 113525848 113525862 TLX1 JASPAR yes 118353504
chr1 113525859 113525869 ELK1 JASPAR yes 31603357
chr1 113525859 113525869 ELK1 JASPAR yes 118353505
chr1 113525861 113525870 ELK4 JASPAR yes 31603358
chr1 113525861 113525870 ELK4 JASPAR yes 118353506
chr1 113525861 113525871 ELK1 JASPAR yes 31603359
chr1 113525861 113525871 ELK3 JASPAR yes 31603360
chr1 113525861 113525871 ETS1 JASPAR yes 31603361
chr1 113525861 113525871 ETV1 JASPAR yes 31603362
chr1 113525861 113525871 ETV4 JASPAR yes 31603363
chr1 113525861 113525871 ETV5 JASPAR yes 31603364
chr1 113525861 113525871 FEV JASPAR yes 31603365
chr1 113525861 113525871 FLI1 JASPAR yes 31603366
chr1 113525861 113525871 GABPA JASPAR yes 31603367
chr1 113525861 113525871 ELK1 JASPAR yes 118353507
chr1 113525861 113525871 ELK3 JASPAR yes 118353508
chr1 113525861 113525871 ETS1 JASPAR yes 118353509
chr1 113525861 113525871 ETV1 JASPAR yes 118353510
chr1 113525861 113525871 ETV4 JASPAR yes 118353511
chr1 113525861 113525871 ETV5 JASPAR yes 118353512
chr1 113525861 113525871 FEV JASPAR yes 118353513
chr1 113525861 113525871 FLI1 JASPAR yes 118353514
chr1 113525861 113525871 GABPA JASPAR yes 118353515
chr1 113525861 113525872 ELK4 JASPAR yes 31603368
chr1 113525861 113525872 ELK4 JASPAR yes 118353516
chr1 113525863 113525869 ETS1 JASPAR yes 31603369
chr1 113525863 113525869 SPI1 JASPAR yes 31603370
chr1 113525863 113525869 ETS1 JASPAR yes 118353517
chr1 113525863 113525869 SPI1 JASPAR yes 118353518
chr1 113525913 113525924 CDX2 JASPAR yes 31603371
chr1 113525913 113525924 CDX2 JASPAR yes 118353519
chr1 113525914 113525925 HOXD12 JASPAR yes 31603372
chr1 113525914 113525925 HOXD12 JASPAR yes 118353520
SNP sites on vista2987[chr1:113525578-113525919]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 113525702 rs144786680 A G
BCL6B
567475
chr1 113525820 rs116266728 C T no 567476
chr1 113525825 rs555593649 T C no 567477
chr1 113525828 rs41318845 G A no 567478
Genes possibly regulated by vista2987[chr1:113525578-113525919]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 113454469 113499635 - SLC16A1 ENSG00000155380.7 113499635 0.92 0.99 1031 74057
chr1 113615831 113674882 + LRIG2 ENSG00000198799.7 113615831 0.67 1.0 1032 10088
Expression level of Genes
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miRNAs possibly regulated by vista2987[chr1:113525578-113525919]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results