EnhancerDB
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  3. vista29879[chr19:52229316-52229816]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29879[chr19:52229316-52229816]
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Tissue distribution of vista29879
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Transcription factor that possibly regulate vista29879[chr19:52229316-52229816]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52229228 52229738 POLR2A UCSC Txn Factor no Conserved 108426445
chr19 52229337 52229348 TBX20 JASPAR yes 70873177
chr19 52229339 52229347 MGA JASPAR yes 70873178
chr19 52229348 52229361 EOMES JASPAR yes 70873179
chr19 52229350 52229361 TBX20 JASPAR yes 70873180
chr19 52229351 52229361 TBX21 JASPAR yes 70873181
chr19 52229352 52229360 MGA JASPAR yes 70873182
chr19 52229352 52229360 TBX15 JASPAR yes 70873183
chr19 52229352 52229360 TBX1 JASPAR yes 70873184
chr19 52229352 52229360 TBX4 JASPAR yes 70873185
chr19 52229352 52229360 TBX5 JASPAR yes 70873186
chr19 52229360 52229373 NFKB1 JASPAR yes 70873187
chr19 52229360 52229373 NFKB2 JASPAR yes 70873188
chr19 52229361 52229371 NFKB1 JASPAR yes 70873189
chr19 52229361 52229371 RELA JASPAR yes 70873190
chr19 52229361 52229371 REL JASPAR yes 70873191
chr19 52229361 52229372 NFKB1 JASPAR yes 70873192
chr19 52229361 52229374 NFKB2 JASPAR yes 70873193
chr19 52229362 52229373 NFKB1 JASPAR yes 70873194
chr19 52229376 52229387 NRF1 JASPAR yes 70873195
chr19 52229393 52229412 REST JASPAR yes 70873196
chr19 52229408 52229412 NFE TRANSFAC yes 70873197
chr19 52229420 52229433 NFKB1 JASPAR yes 70873198
chr19 52229420 52229433 NFKB2 JASPAR yes 70873199
chr19 52229426 52229440 EBF1 JASPAR yes 70873200
chr19 52229443 52229448 SP1 TRANSFAC yes 70873201
chr19 52229446 52229456 SP1 JASPAR yes 70873202
chr19 52229447 52229458 E2F6 JASPAR yes 70873203
chr19 52229461 52229467 SP1 TRANSFAC yes 70873204
chr19 52229462 52229467 SP1 TRANSFAC yes 70873205
chr19 52229463 52229468 SP1 TRANSFAC yes 70873206
chr19 52229485 52229500 RFX5 JASPAR yes 70873207
chr19 52229517 52229528 NFE2L2 JASPAR yes 70873208
chr19 52229535 52229539 H4TF2 TRANSFAC yes 70873209
chr19 52229562 52229583 ZNF263 JASPAR yes 70873210
chr19 52229572 52229578 MAZ TRANSFAC yes 70873211
chr19 52229587 52229592 SP1 TRANSFAC yes 70873212
chr19 52229589 52229604 ZIC3 JASPAR yes 70873213
chr19 52229589 52229604 ZIC4 JASPAR yes 70873214
chr19 52229590 52229604 ZIC1 JASPAR yes 70873215
chr19 52229594 52229604 SP1 JASPAR yes 70873216
chr19 52229594 52229604 ZNF740 JASPAR yes 70873217
chr19 52229596 52229602 MAZ TRANSFAC yes 70873218
chr19 52229602 52229606 LFA1 TRANSFAC yes 70873219
chr19 52229618 52229624 MZF1 JASPAR yes 70873220
chr19 52229630 52229634 LFA1 TRANSFAC yes 70873221
chr19 52229633 52229637 YY1 TRANSFAC yes 70873222
chr19 52229643 52229651 SP1 TRANSFAC yes 70873223
chr19 52229643 52229653 SP1 JASPAR yes 70873224
chr19 52229647 52229668 ZNF263 JASPAR yes 70873225
chr19 52229653 52229661 SP1 TRANSFAC yes 70873226
chr19 52229653 52229663 SP1 JASPAR yes 70873227
chr19 52229654 52229660 SP1 TRANSFAC yes 70873228
chr19 52229656 52229661 SP1 TRANSFAC yes 70873229
chr19 52229657 52229674 PAX1 JASPAR yes 70873230
chr19 52229672 52229684 NHLH1 JASPAR yes 70873231
chr19 52229673 52229683 MSC JASPAR yes 70873232
chr19 52229681 52229685 TEAD2 TRANSFAC yes 70873233
chr19 52229681 52229686 TBP TRANSFAC yes 70873234
chr19 52229681 52229687 TFIID TRANSFAC yes 70873235
chr19 52229685 52229697 TAL1 JASPAR yes 70873236
chr19 52229685 52229698 ZBTB18 JASPAR yes 70873237
chr19 52229687 52229697 NEUROG2 JASPAR yes 70873238
chr19 52229687 52229697 OLIG1 JASPAR yes 70873239
chr19 52229687 52229697 OLIG3 JASPAR yes 70873240
chr19 52229687 52229699 TAL1 JASPAR yes 70873241
chr19 52229717 52229725 EHF JASPAR yes 70873242
chr19 52229723 52229728 GATA2 JASPAR yes 70873243
chr19 52229726 52229729 MYB TRANSFAC yes 70873244
chr19 52229736 52229746 GSC2 JASPAR yes 70873245
chr19 52229737 52229745 OTX1 JASPAR yes 70873246
chr19 52229737 52229745 OTX2 JASPAR yes 70873247
chr19 52229741 52229762 ZNF263 JASPAR yes 70873248
chr19 52229749 52229760 E2F6 JASPAR yes 70873249
chr19 52229779 52229790 STAT3 JASPAR yes 70873250
chr19 52229780 52229801 ZNF263 JASPAR yes 70873251
SNP sites on vista29879[chr19:52229316-52229816]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29879[chr19:52229316-52229816]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52114781 52150151 - SIGLEC5 ENSG00000105501.7 52150151 0.97 0.96 17930 20835
chr19 52115344 52150142 - SIGLEC5 ENSG00000268500.1 52150142 0.97 1.0 17931 20826
chr19 52145806 52150054 - SIGLEC14 ENSG00000254415.3 52150054 0.97 0.96 17932 20738
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 97931
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 22453
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 74537
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 31400
Expression level of Genes
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miRNAs possibly regulated by vista29879[chr19:52229316-52229816]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results