EnhancerDB
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  3. vista2988[chr1:113574968-113575168]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2988[chr1:113574968-113575168]
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Tissue distribution of vista2988
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Transcription factor that possibly regulate vista2988[chr1:113574968-113575168]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 113574966 113574987 IRF1 JASPAR yes 31610086
chr1 113574966 113574987 IRF1 JASPAR yes 118353521
chr1 113574968 113574983 FOXP1 JASPAR yes 31610087
chr1 113574968 113574983 FOXP1 JASPAR yes 118353522
chr1 113574969 113574984 FOXP1 JASPAR yes 31610088
chr1 113574969 113574984 FOXP1 JASPAR yes 118353523
chr1 113574970 113574985 FOXP1 JASPAR yes 31610089
chr1 113574970 113574985 FOXP1 JASPAR yes 118353524
chr1 113574970 113574991 IRF1 JASPAR yes 31610090
chr1 113574970 113574991 IRF1 JASPAR yes 118353525
chr1 113574971 113574986 FOXP1 JASPAR yes 31610091
chr1 113574971 113574986 FOXP1 JASPAR yes 118353526
chr1 113574971 113574992 IRF1 JASPAR yes 31610092
chr1 113574971 113574992 IRF1 JASPAR yes 118353527
chr1 113574972 113574987 FOXP1 JASPAR yes 31610093
chr1 113574972 113574987 FOXP1 JASPAR yes 118353528
chr1 113574972 113574993 IRF1 JASPAR yes 31610094
chr1 113574972 113574993 IRF1 JASPAR yes 118353529
chr1 113574973 113574988 FOXP1 JASPAR yes 31610095
chr1 113574973 113574988 FOXP1 JASPAR yes 118353530
chr1 113574976 113574991 STAT2 JASPAR yes 31610096
chr1 113574976 113574991 STAT2 JASPAR yes 118353531
chr1 113574993 113575007 FOXF2 JASPAR yes 31610097
chr1 113574993 113575007 FOXF2 JASPAR yes 118353532
chr1 113575003 113575007 TEAD2 TRANSFAC yes 31610098
chr1 113575003 113575007 TEAD2 TRANSFAC yes 118353533
chr1 113575004 113575018 ONECUT3 JASPAR yes 31610099
chr1 113575004 113575018 ONECUT3 JASPAR yes 118353534
chr1 113575005 113575015 PAX3 JASPAR yes 31610100
chr1 113575005 113575015 PAX7 JASPAR yes 31610101
chr1 113575005 113575015 PAX3 JASPAR yes 118353535
chr1 113575005 113575015 PAX7 JASPAR yes 118353536
chr1 113575005 113575020 MAFK JASPAR yes 31610102
chr1 113575005 113575020 MAFK JASPAR yes 118353537
chr1 113575013 113575018 H4TF1 TRANSFAC yes 31610103
chr1 113575013 113575018 H4TF1 TRANSFAC yes 118353538
chr1 113575039 113575050 FOXP2 JASPAR yes 31610104
chr1 113575039 113575050 FOXP2 JASPAR yes 118353539
chr1 113575050 113575061 TBX20 JASPAR yes 31610105
chr1 113575050 113575061 TBX20 JASPAR yes 118353540
chr1 113575060 113575073 EOMES JASPAR yes 31610106
chr1 113575060 113575073 EOMES JASPAR yes 118353541
chr1 113575061 113575065 YY1 TRANSFAC yes 31610107
chr1 113575061 113575065 YY1 TRANSFAC yes 118353542
chr1 113575062 113575072 TBR1 JASPAR yes 31610108
chr1 113575062 113575072 TBR1 JASPAR yes 118353543
chr1 113575062 113575073 TBX20 JASPAR yes 31610109
chr1 113575062 113575073 TBX2 JASPAR yes 31610110
chr1 113575062 113575073 TBX20 JASPAR yes 118353544
chr1 113575062 113575073 TBX2 JASPAR yes 118353545
chr1 113575063 113575073 TBX21 JASPAR yes 31610111
chr1 113575063 113575073 TBX21 JASPAR yes 118353546
chr1 113575064 113575067 MYB TRANSFAC yes 31610112
chr1 113575064 113575067 MYB TRANSFAC yes 118353547
chr1 113575064 113575072 MGA JASPAR yes 31610113
chr1 113575064 113575072 TBX15 JASPAR yes 31610114
chr1 113575064 113575072 TBX1 JASPAR yes 31610115
chr1 113575064 113575072 TBX4 JASPAR yes 31610116
chr1 113575064 113575072 TBX5 JASPAR yes 31610117
chr1 113575064 113575072 MGA JASPAR yes 118353548
chr1 113575064 113575072 TBX15 JASPAR yes 118353549
chr1 113575064 113575072 TBX1 JASPAR yes 118353550
chr1 113575064 113575072 TBX4 JASPAR yes 118353551
chr1 113575064 113575072 TBX5 JASPAR yes 118353552
chr1 113575097 113575117 PPARG JASPAR yes 31610118
chr1 113575097 113575117 PPARG JASPAR yes 118353553
chr1 113575115 113575119 YY1 TRANSFAC yes 31610119
chr1 113575115 113575119 YY1 TRANSFAC yes 118353554
chr1 113575129 113575142 NR2F1 JASPAR yes 31610120
chr1 113575129 113575142 NR2F1 JASPAR yes 118353555
chr1 113575132 113575140 NR4A2 JASPAR yes 31610121
chr1 113575132 113575140 NR4A2 JASPAR yes 118353556
chr1 113575133 113575143 RORA JASPAR yes 31610122
chr1 113575133 113575143 RORA JASPAR yes 118353557
chr1 113575166 113575170 YY1 TRANSFAC yes 31610123
chr1 113575166 113575170 YY1 TRANSFAC yes 118353558
SNP sites on vista2988[chr1:113574968-113575168]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 113574970 rs551496322 CAA C,CA
FOXP1 IRF1
568007
chr1 113574970 rs57655262 CAA C
FOXP1 IRF1
568008
chr1 113574970 rs771198935 CAA C
FOXP1 IRF1
568009
chr1 113575048 rs17030901 A T
FOXP2
568010
chr1 113575114 rs17030905 T C
PPARG
568011
Genes possibly regulated by vista2988[chr1:113574968-113575168]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 113454469 113499635 - SLC16A1 ENSG00000155380.7 113499635 0.92 0.99 1031 24667
chr1 113615831 113674882 + LRIG2 ENSG00000198799.7 113615831 0.67 1.0 1032 59337
Expression level of Genes
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miRNAs possibly regulated by vista2988[chr1:113574968-113575168]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results