EnhancerDB
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  3. vista29887[chr19:52267467-52267945]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29887[chr19:52267467-52267945]
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Tissue distribution of vista29887
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Transcription factor that possibly regulate vista29887[chr19:52267467-52267945]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52267928 52268192 CEBPB UCSC Txn Factor no Conserved 108426470
chr19 52267474 52267478 H1TF2 TRANSFAC yes 70873559
chr19 52267474 52267478 NFE TRANSFAC yes 70873560
chr19 52267474 52267478 SRF TRANSFAC yes 70873561
chr19 52267482 52267488 MAZ TRANSFAC yes 70873562
chr19 52267482 52267493 E2F6 JASPAR yes 70873563
chr19 52267489 52267504 STAT1 JASPAR yes 70873564
chr19 52267500 52267515 AR JASPAR yes 70873565
chr19 52267505 52267517 PROX1 JASPAR yes 70873566
chr19 52267535 52267552 RARA JASPAR yes 70873567
chr19 52267543 52267556 NR2F1 JASPAR yes 70873568
chr19 52267547 52267551 ESR1 TRANSFAC yes 70873569
chr19 52267571 52267591 TBX19 JASPAR yes 70873570
chr19 52267573 52267589 T JASPAR yes 70873571
chr19 52267582 52267596 POU1F1 JASPAR yes 70873572
chr19 52267583 52267595 POU3F1 JASPAR yes 70873573
chr19 52267583 52267596 POU3F3 JASPAR yes 70873574
chr19 52267590 52267594 YY1 TRANSFAC yes 70873575
chr19 52267594 52267604 POU6F2 JASPAR yes 70873576
chr19 52267598 52267602 YY1 TRANSFAC yes 70873577
chr19 52267601 52267605 TEAD2 TRANSFAC yes 70873578
chr19 52267612 52267623 ESRRA JASPAR yes 70873579
chr19 52267612 52267623 ESRRB JASPAR yes 70873580
chr19 52267616 52267620 LFA1 TRANSFAC yes 70873581
chr19 52267619 52267634 MAFK JASPAR yes 70873582
chr19 52267677 52267693 POU4F2 JASPAR yes 70873583
chr19 52267680 52267690 HOXB2 JASPAR yes 70873584
chr19 52267680 52267690 HOXB3 JASPAR yes 70873585
chr19 52267680 52267690 MNX1 JASPAR yes 70873586
chr19 52267680 52267690 POU6F1 JASPAR yes 70873587
chr19 52267681 52267689 LMX1A JASPAR yes 70873588
chr19 52267681 52267689 LMX1B JASPAR yes 70873589
chr19 52267681 52267689 NKX6-1 JASPAR yes 70873590
chr19 52267681 52267689 NKX6-2 JASPAR yes 70873591
chr19 52267681 52267689 VAX1 JASPAR yes 70873592
chr19 52267681 52267689 VAX2 JASPAR yes 70873593
chr19 52267681 52267689 VSX1 JASPAR yes 70873594
chr19 52267681 52267689 VSX2 JASPAR yes 70873595
chr19 52267688 52267696 TBX5 JASPAR yes 70873596
chr19 52267695 52267700 GATA2 JASPAR yes 70873597
chr19 52267723 52267726 MYB TRANSFAC yes 70873598
chr19 52267726 52267736 NOTO JASPAR yes 70873599
chr19 52267727 52267741 SPI1 JASPAR yes 70873600
chr19 52267733 52267751 MAFF JASPAR yes 70873601
chr19 52267735 52267746 NRL JASPAR yes 70873602
chr19 52267735 52267750 MAFK JASPAR yes 70873603
chr19 52267735 52267756 MAFG JASPAR yes 70873604
chr19 52267750 52267754 YY1 TRANSFAC yes 70873605
chr19 52267755 52267770 RUNX2 JASPAR yes 70873606
chr19 52267758 52267769 RUNX1 JASPAR yes 70873607
chr19 52267762 52267780 RARA JASPAR yes 70873608
chr19 52267763 52267774 CDX2 JASPAR yes 70873609
chr19 52267764 52267768 ESR1 TRANSFAC yes 70873610
chr19 52267764 52267775 HOXA10 JASPAR yes 70873611
chr19 52267764 52267775 HOXC11 JASPAR yes 70873612
chr19 52267764 52267775 HOXC12 JASPAR yes 70873613
chr19 52267764 52267775 HOXD12 JASPAR yes 70873614
chr19 52267765 52267774 CDX1 JASPAR yes 70873615
chr19 52267765 52267775 HOXC10 JASPAR yes 70873616
chr19 52267765 52267775 HOXD11 JASPAR yes 70873617
chr19 52267770 52267781 PHOX2A JASPAR yes 70873618
chr19 52267791 52267802 TBX20 JASPAR yes 70873619
chr19 52267791 52267809 IRF2 JASPAR yes 70873620
chr19 52267792 52267803 CEBPA JASPAR yes 70873621
chr19 52267803 52267814 ELK4 JASPAR yes 70873622
chr19 52267803 52267814 FLI1 JASPAR yes 70873623
chr19 52267804 52267814 ELK1 JASPAR yes 70873624
chr19 52267804 52267814 ELK3 JASPAR yes 70873625
chr19 52267804 52267814 ERF JASPAR yes 70873626
chr19 52267804 52267814 ERG JASPAR yes 70873627
chr19 52267804 52267814 ETS1 JASPAR yes 70873628
chr19 52267804 52267814 ETV1 JASPAR yes 70873629
chr19 52267804 52267814 ETV3 JASPAR yes 70873630
chr19 52267804 52267814 ETV4 JASPAR yes 70873631
chr19 52267804 52267814 ETV5 JASPAR yes 70873632
chr19 52267804 52267814 ETV6 JASPAR yes 70873633
chr19 52267804 52267814 FEV JASPAR yes 70873634
chr19 52267804 52267814 FLI1 JASPAR yes 70873635
chr19 52267804 52267814 GABPA JASPAR yes 70873636
chr19 52267804 52267815 ETV2 JASPAR yes 70873637
chr19 52267804 52267816 ELF1 JASPAR yes 70873638
chr19 52267804 52267816 ELF4 JASPAR yes 70873639
chr19 52267804 52267817 ELF1 JASPAR yes 70873640
chr19 52267806 52267812 ETS1 JASPAR yes 70873641
chr19 52267806 52267812 SPI1 JASPAR yes 70873642
chr19 52267829 52267844 SCRT1 JASPAR yes 70873643
chr19 52267833 52267839 PTF TRANSFAC yes 70873644
chr19 52267836 52267848 HLF JASPAR yes 70873645
chr19 52267850 52267860 NKX2-3 JASPAR yes 70873646
chr19 52267864 52267879 SOX21 JASPAR yes 70873647
chr19 52267890 52267906 SOX8 JASPAR yes 70873648
chr19 52267901 52267914 SMAD2 JASPAR yes 70873649
SNP sites on vista29887[chr19:52267467-52267945]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29887[chr19:52267467-52267945]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 59780
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 60582
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 87812
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 69529
Expression level of Genes
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miRNAs possibly regulated by vista29887[chr19:52267467-52267945]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results