EnhancerDB
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  3. vista2989[chr1:113584893-113585079]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2989[chr1:113584893-113585079]
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Tissue distribution of vista2989
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Transcription factor that possibly regulate vista2989[chr1:113584893-113585079]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 113584783 113585191 RELA UCSC Txn Factor no Conserved 107822964
chr1 113584816 113585216 RUNX3 UCSC Txn Factor no Conserved 107822969
chr1 113584888 113584899 RUNX1 JASPAR yes 31611338
chr1 113584888 113584899 RUNX1 JASPAR yes 118353559
chr1 113584894 113584898 ESR1 TRANSFAC yes 31611339
chr1 113584894 113584898 ESR1 TRANSFAC yes 118353560
chr1 113584906 113584921 JUND JASPAR yes 31611340
chr1 113584906 113584921 JUND JASPAR yes 118353561
chr1 113584907 113584920 JUN JASPAR yes 31611341
chr1 113584907 113584920 JUN JASPAR yes 118353562
chr1 113584912 113584922 HOXC10 JASPAR yes 31611342
chr1 113584912 113584922 HOXD11 JASPAR yes 31611343
chr1 113584912 113584922 HOXC10 JASPAR yes 118353563
chr1 113584912 113584922 HOXD11 JASPAR yes 118353564
chr1 113584914 113584918 YY1 TRANSFAC yes 31611344
chr1 113584914 113584918 YY1 TRANSFAC yes 118353565
chr1 113584934 113584946 TEAD1 JASPAR yes 31611345
chr1 113584934 113584946 TEAD1 JASPAR yes 118353566
chr1 113584937 113584953 SOX8 JASPAR yes 31611346
chr1 113584937 113584953 SOX8 JASPAR yes 118353567
chr1 113584938 113584950 POU2F1 JASPAR yes 31611347
chr1 113584938 113584950 POU2F1 JASPAR yes 118353568
chr1 113584938 113584951 POU3F3 JASPAR yes 31611348
chr1 113584938 113584951 POU3F3 JASPAR yes 118353569
chr1 113584938 113584952 POU1F1 JASPAR yes 31611349
chr1 113584938 113584952 POU1F1 JASPAR yes 118353570
chr1 113584939 113584951 POU3F1 JASPAR yes 31611350
chr1 113584939 113584951 POU3F2 JASPAR yes 31611351
chr1 113584939 113584951 POU3F1 JASPAR yes 118353571
chr1 113584939 113584951 POU3F2 JASPAR yes 118353572
chr1 113584939 113584952 POU2F2 JASPAR yes 31611352
chr1 113584939 113584952 POU2F2 JASPAR yes 118353573
chr1 113584940 113584949 POU3F4 JASPAR yes 31611353
chr1 113584940 113584949 POU5F1B JASPAR yes 31611354
chr1 113584940 113584949 POU3F4 JASPAR yes 118353574
chr1 113584940 113584949 POU5F1B JASPAR yes 118353575
chr1 113584941 113584948 POU2F1 TRANSFAC yes 31611355
chr1 113584941 113584948 POU2F2 TRANSFAC yes 31611356
chr1 113584941 113584948 POU2F1 TRANSFAC yes 118353576
chr1 113584941 113584948 POU2F2 TRANSFAC yes 118353577
chr1 113584959 113584969 RELA JASPAR yes 31611357
chr1 113584959 113584969 REL JASPAR yes 31611358
chr1 113584959 113584969 RELA JASPAR yes 118353578
chr1 113584959 113584969 REL JASPAR yes 118353579
chr1 113584959 113584970 NFKB1 JASPAR yes 31611359
chr1 113584959 113584970 NFKB1 JASPAR yes 118353580
chr1 113584960 113584970 NFKB1 JASPAR yes 31611360
chr1 113584960 113584970 NFKB1 JASPAR yes 118353581
chr1 113584979 113584986 ETS1 TRANSFAC yes 31611361
chr1 113584979 113584986 ETS1 TRANSFAC yes 118353582
chr1 113584979 113584990 FLI1 JASPAR yes 31611362
chr1 113584979 113584990 FLI1 JASPAR yes 118353583
chr1 113584982 113584997 RUNX2 JASPAR yes 31611363
chr1 113584982 113584997 RUNX2 JASPAR yes 118353584
chr1 113584986 113584996 RUNX3 JASPAR yes 31611364
chr1 113584986 113584996 RUNX3 JASPAR yes 118353585
chr1 113584987 113584996 RUNX2 JASPAR yes 31611365
chr1 113584987 113584996 RUNX2 JASPAR yes 118353586
chr1 113584992 113585003 HOXC13 JASPAR yes 31611366
chr1 113584992 113585003 HOXC13 JASPAR yes 118353587
chr1 113584995 113584998 MYB TRANSFAC yes 31611367
chr1 113584995 113584998 MYB TRANSFAC yes 118353588
chr1 113585005 113585016 USF1 JASPAR yes 31611368
chr1 113585005 113585016 USF2 JASPAR yes 31611369
chr1 113585005 113585016 USF1 JASPAR yes 118353589
chr1 113585005 113585016 USF2 JASPAR yes 118353590
chr1 113585012 113585029 ZNF410 JASPAR yes 31611370
chr1 113585012 113585029 ZNF410 JASPAR yes 118353591
chr1 113585021 113585033 POU2F1 JASPAR yes 31611371
chr1 113585021 113585033 POU2F1 JASPAR yes 118353592
chr1 113585021 113585034 POU3F3 JASPAR yes 31611372
chr1 113585021 113585034 POU3F3 JASPAR yes 118353593
chr1 113585022 113585034 POU3F1 JASPAR yes 31611373
chr1 113585022 113585034 POU3F2 JASPAR yes 31611374
chr1 113585022 113585034 POU3F1 JASPAR yes 118353594
chr1 113585022 113585034 POU3F2 JASPAR yes 118353595
chr1 113585023 113585032 POU3F4 JASPAR yes 31611375
chr1 113585023 113585032 POU5F1B JASPAR yes 31611376
chr1 113585023 113585032 POU3F4 JASPAR yes 118353596
chr1 113585023 113585032 POU5F1B JASPAR yes 118353597
SNP sites on vista2989[chr1:113584893-113585079]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 113584926 rs552567695 C T
RELA RUNX3
568132
chr1 113584964 rs569246689 A G
NFKB1 REL RELA RUNX3
568133
chr1 113585021 rs139460554 T C
POU2F1 POU3F3 RELA RUNX3 ZNF410
568134
chr1 113585071 rs113446590 T A
RELA RUNX3
568135
Genes possibly regulated by vista2989[chr1:113584893-113585079]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 113454469 113499635 - SLC16A1 ENSG00000155380.7 113499635 0.92 0.99 1031 14742
chr1 113615831 113674882 + LRIG2 ENSG00000198799.7 113615831 0.67 1.0 1032 69248
Expression level of Genes
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miRNAs possibly regulated by vista2989[chr1:113584893-113585079]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results