EnhancerDB
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  3. vista29890[chr19:52276417-52276635]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29890[chr19:52276417-52276635]
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Tissue distribution of vista29890
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Transcription factor that possibly regulate vista29890[chr19:52276417-52276635]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52276205 52276565 CTCF UCSC Txn Factor no Conserved 108426729
chr19 52276425 52276436 EBF1 JASPAR yes 70873806
chr19 52276425 52276440 ZBTB33 JASPAR yes 70873807
chr19 52276444 52276455 CEBPA JASPAR yes 70873808
chr19 52276460 52276470 MZF1 JASPAR yes 70873809
chr19 52276460 52276479 PAX5 JASPAR yes 70873810
chr19 52276470 52276479 HIC2 JASPAR yes 70873811
chr19 52276473 52276477 LFA1 TRANSFAC yes 70873812
chr19 52276481 52276492 FLI1 JASPAR yes 70873813
chr19 52276483 52276491 EHF JASPAR yes 70873814
chr19 52276491 52276495 NFE TRANSFAC yes 70873815
chr19 52276518 52276528 SP1 JASPAR yes 70873816
chr19 52276560 52276566 MZF1 JASPAR yes 70873817
chr19 52276572 52276587 HNF4A JASPAR yes 70873818
chr19 52276578 52276589 FOSL1 JASPAR yes 70873819
chr19 52276580 52276591 BATF JASPAR yes 70873820
chr19 52276583 52276593 GSX2 JASPAR yes 70873821
chr19 52276583 52276593 HESX1 JASPAR yes 70873822
chr19 52276583 52276593 LBX2 JASPAR yes 70873823
chr19 52276583 52276593 MIXL1 JASPAR yes 70873824
chr19 52276583 52276593 MNX1 JASPAR yes 70873825
chr19 52276583 52276593 RAX JASPAR yes 70873826
chr19 52276584 52276592 ISX JASPAR yes 70873827
chr19 52276584 52276592 LHX9 JASPAR yes 70873828
chr19 52276584 52276592 LMX1B JASPAR yes 70873829
chr19 52276584 52276592 PRRX1 JASPAR yes 70873830
chr19 52276584 52276592 RAX2 JASPAR yes 70873831
chr19 52276584 52276592 SHOX JASPAR yes 70873832
chr19 52276584 52276592 UNCX JASPAR yes 70873833
chr19 52276598 52276603 ETS2 TRANSFAC yes 70873834
chr19 52276604 52276608 TEAD2 TRANSFAC yes 70873835
chr19 52276604 52276609 TBP TRANSFAC yes 70873836
chr19 52276604 52276610 TMF TRANSFAC yes 70873837
SNP sites on vista29890[chr19:52276417-52276635]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29890[chr19:52276417-52276635]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 50830
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 69272
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 78862
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 78219
Expression level of Genes
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miRNAs possibly regulated by vista29890[chr19:52276417-52276635]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results