EnhancerDB
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  3. vista29895[chr19:52303612-52304072]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29895[chr19:52303612-52304072]
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Tissue distribution of vista29895
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Transcription factor that possibly regulate vista29895[chr19:52303612-52304072]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52303509 52304240 POLR2A UCSC Txn Factor no Conserved 108426809
chr19 52303533 52304413 GATA2 UCSC Txn Factor no Conserved 108426812
chr19 52303576 52303960 EP300 UCSC Txn Factor no Conserved 108426818
chr19 52303634 52303984 STAT5A UCSC Txn Factor no Conserved 108426828
chr19 52303648 52303943 TAL1 UCSC Txn Factor no Conserved 108426836
chr19 52303656 52303980 TEAD4 UCSC Txn Factor no Conserved 108426840
chr19 52303638 52303642 YY1 TRANSFAC yes 70874093
chr19 52303638 52303642 YY1 TRANSFAC yes 113788638
chr19 52303651 52303655 TEAD2 TRANSFAC yes 70874094
chr19 52303651 52303655 TEAD2 TRANSFAC yes 113788639
chr19 52303651 52303656 TBP TRANSFAC yes 70874095
chr19 52303651 52303656 TBP TRANSFAC yes 113788640
chr19 52303672 52303681 HIC2 JASPAR yes 70874096
chr19 52303672 52303681 HIC2 JASPAR yes 113788641
chr19 52303696 52303700 LFA1 TRANSFAC yes 70874097
chr19 52303696 52303700 LFA1 TRANSFAC yes 113788642
chr19 52303698 52303706 DLX6 JASPAR yes 70874098
chr19 52303698 52303706 MSX1 JASPAR yes 70874099
chr19 52303698 52303706 DLX6 JASPAR yes 113788643
chr19 52303698 52303706 MSX1 JASPAR yes 113788644
chr19 52303712 52303723 E2F6 JASPAR yes 70874100
chr19 52303712 52303723 E2F6 JASPAR yes 113788645
chr19 52303712 52303727 NR2C2 JASPAR yes 70874101
chr19 52303712 52303727 NR2C2 JASPAR yes 113788646
chr19 52303713 52303718 SP1 TRANSFAC yes 70874102
chr19 52303713 52303718 SP1 TRANSFAC yes 113788647
chr19 52303717 52303732 HSF1 JASPAR yes 70874103
chr19 52303717 52303732 HSF1 JASPAR yes 113788648
chr19 52303727 52303744 PAX1 JASPAR yes 70874104
chr19 52303727 52303744 PAX9 JASPAR yes 70874105
chr19 52303727 52303744 PAX1 JASPAR yes 113788649
chr19 52303727 52303744 PAX9 JASPAR yes 113788650
chr19 52303738 52303752 TLX1 JASPAR yes 70874106
chr19 52303738 52303752 TLX1 JASPAR yes 113788651
chr19 52303740 52303759 RFX2 JASPAR yes 70874107
chr19 52303740 52303759 RFX2 JASPAR yes 113788652
chr19 52303765 52303768 MYB TRANSFAC yes 70874108
chr19 52303765 52303768 MYB TRANSFAC yes 113788653
chr19 52303768 52303783 RFX5 JASPAR yes 70874109
chr19 52303768 52303783 RFX5 JASPAR yes 113788654
chr19 52303783 52303788 SP1 TRANSFAC yes 70874110
chr19 52303783 52303788 SP1 TRANSFAC yes 113788655
chr19 52303789 52303798 NFIX JASPAR yes 70874111
chr19 52303789 52303798 NFIX JASPAR yes 113788656
chr19 52303790 52303796 NFIC JASPAR yes 70874112
chr19 52303790 52303796 NFIC JASPAR yes 113788657
chr19 52303824 52303829 ETS2 TRANSFAC yes 70874113
chr19 52303824 52303829 ETS2 TRANSFAC yes 113788658
chr19 52303845 52303858 EOMES JASPAR yes 70874114
chr19 52303845 52303858 EOMES JASPAR yes 113788659
chr19 52303849 52303863 GATA2 JASPAR yes 70874115
chr19 52303849 52303863 GATA2 JASPAR yes 113788660
chr19 52303851 52303857 GATA1 TRANSFAC yes 70874116
chr19 52303851 52303857 GATA1 TRANSFAC yes 113788661
chr19 52303851 52303859 GATA5 JASPAR yes 70874117
chr19 52303851 52303859 GATA5 JASPAR yes 113788662
chr19 52303867 52303882 RUNX2 JASPAR yes 70874118
chr19 52303867 52303882 RUNX2 JASPAR yes 113788663
chr19 52303876 52303880 ESR1 TRANSFAC yes 70874119
chr19 52303876 52303880 ESR1 TRANSFAC yes 113788664
chr19 52303876 52303887 USF1 JASPAR yes 70874120
chr19 52303876 52303887 USF1 JASPAR yes 113788665
chr19 52303877 52303887 SREBF2 JASPAR yes 70874121
chr19 52303877 52303887 SREBF2 JASPAR yes 113788666
chr19 52303888 52303892 LFA1 TRANSFAC yes 70874122
chr19 52303888 52303892 LFA1 TRANSFAC yes 113788667
chr19 52303891 52303898 PEA3 TRANSFAC yes 70874123
chr19 52303891 52303898 PEA3 TRANSFAC yes 113788668
chr19 52303919 52303929 TEAD1 JASPAR yes 70874124
chr19 52303919 52303929 TEAD4 JASPAR yes 70874125
chr19 52303919 52303929 TEAD1 JASPAR yes 113788669
chr19 52303919 52303929 TEAD4 JASPAR yes 113788670
chr19 52303920 52303928 TEAD3 JASPAR yes 70874126
chr19 52303920 52303928 TEAD3 JASPAR yes 113788671
chr19 52303921 52303942 IRF1 JASPAR yes 70874127
chr19 52303921 52303942 IRF1 JASPAR yes 113788672
chr19 52303925 52303937 IRF1 JASPAR yes 70874128
chr19 52303925 52303937 IRF1 JASPAR yes 113788673
chr19 52303925 52303939 IRF7 JASPAR yes 70874129
chr19 52303925 52303939 IRF7 JASPAR yes 113788674
chr19 52303948 52303960 YY1 JASPAR yes 70874130
chr19 52303948 52303960 YY1 JASPAR yes 113788675
chr19 52303954 52303959 SP1 TRANSFAC yes 70874131
chr19 52303954 52303959 SP1 TRANSFAC yes 113788676
chr19 52303966 52303972 SOX10 JASPAR yes 70874132
chr19 52303966 52303972 SOX10 JASPAR yes 113788677
chr19 52303970 52303990 PPARG JASPAR yes 70874133
chr19 52303970 52303990 PPARG JASPAR yes 113788678
chr19 52303987 52303990 MYB TRANSFAC yes 70874134
chr19 52303987 52303990 MYB TRANSFAC yes 113788679
chr19 52303992 52304007 SOX21 JASPAR yes 70874135
chr19 52303992 52304007 SOX21 JASPAR yes 113788680
chr19 52303996 52304017 IRF1 JASPAR yes 70874136
chr19 52303996 52304017 IRF1 JASPAR yes 113788681
chr19 52304000 52304004 YY1 TRANSFAC yes 70874137
chr19 52304000 52304004 YY1 TRANSFAC yes 113788682
chr19 52304001 52304016 FOXP1 JASPAR yes 70874138
chr19 52304001 52304016 FOXP1 JASPAR yes 113788683
chr19 52304002 52304017 FOXP1 JASPAR yes 70874139
chr19 52304002 52304017 FOXP1 JASPAR yes 113788684
chr19 52304002 52304023 IRF1 JASPAR yes 70874140
chr19 52304002 52304023 IRF1 JASPAR yes 113788685
chr19 52304006 52304020 IRF7 JASPAR yes 70874141
chr19 52304006 52304020 IRF7 JASPAR yes 113788686
chr19 52304007 52304025 SRF JASPAR yes 70874142
chr19 52304007 52304025 SRF JASPAR yes 113788687
chr19 52304018 52304027 SRY JASPAR yes 70874143
chr19 52304018 52304027 SRY JASPAR yes 113788688
chr19 52304020 52304023 MYB TRANSFAC yes 70874144
chr19 52304020 52304023 MYB TRANSFAC yes 113788689
chr19 52304021 52304037 SOX8 JASPAR yes 70874145
chr19 52304021 52304037 SOX8 JASPAR yes 113788690
chr19 52304024 52304035 TBX20 JASPAR yes 70874146
chr19 52304024 52304035 TBX20 JASPAR yes 113788691
chr19 52304025 52304046 IRF1 JASPAR yes 70874147
chr19 52304025 52304046 IRF1 JASPAR yes 113788692
chr19 52304028 52304042 IRF7 JASPAR yes 70874148
chr19 52304028 52304042 IRF7 JASPAR yes 113788693
chr19 52304031 52304046 FOXP1 JASPAR yes 70874149
chr19 52304031 52304046 FOXP1 JASPAR yes 113788694
chr19 52304032 52304043 FOXA1 JASPAR yes 70874150
chr19 52304032 52304043 FOXA1 JASPAR yes 113788695
chr19 52304034 52304045 FOXP2 JASPAR yes 70874151
chr19 52304034 52304045 FOXP2 JASPAR yes 113788696
chr19 52304035 52304043 FOXO3 JASPAR yes 70874152
chr19 52304035 52304043 FOXO3 JASPAR yes 113788697
SNP sites on vista29895[chr19:52303612-52304072]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29895[chr19:52303612-52304072]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 23635
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 96709
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 51667
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 94804
chr19 52359055 52394203 - ZNF577 ENSG00000161551.8 52394203 0.81 1.0 17937 9869
Expression level of Genes
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miRNAs possibly regulated by vista29895[chr19:52303612-52304072]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results