EnhancerDB
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  3. vista29896[chr19:52306801-52307008]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29896[chr19:52306801-52307008]
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Tissue distribution of vista29896
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Transcription factor that possibly regulate vista29896[chr19:52306801-52307008]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52306805 52306809 YY1 TRANSFAC yes 70874153
chr19 52306805 52306809 YY1 TRANSFAC yes 113789215
chr19 52306809 52306822 EOMES JASPAR yes 70874154
chr19 52306809 52306822 EOMES JASPAR yes 113789216
chr19 52306811 52306821 TBR1 JASPAR yes 70874155
chr19 52306811 52306821 TBR1 JASPAR yes 113789217
chr19 52306811 52306822 TBX20 JASPAR yes 70874156
chr19 52306811 52306822 TBX2 JASPAR yes 70874157
chr19 52306811 52306822 TBX20 JASPAR yes 113789218
chr19 52306811 52306822 TBX2 JASPAR yes 113789219
chr19 52306812 52306822 TBX21 JASPAR yes 70874158
chr19 52306812 52306822 TBX21 JASPAR yes 113789220
chr19 52306813 52306821 MGA JASPAR yes 70874159
chr19 52306813 52306821 TBX15 JASPAR yes 70874160
chr19 52306813 52306821 TBX1 JASPAR yes 70874161
chr19 52306813 52306821 TBX4 JASPAR yes 70874162
chr19 52306813 52306821 TBX5 JASPAR yes 70874163
chr19 52306813 52306821 MGA JASPAR yes 113789221
chr19 52306813 52306821 TBX15 JASPAR yes 113789222
chr19 52306813 52306821 TBX1 JASPAR yes 113789223
chr19 52306813 52306821 TBX4 JASPAR yes 113789224
chr19 52306813 52306821 TBX5 JASPAR yes 113789225
chr19 52306829 52306833 TEAD2 TRANSFAC yes 70874164
chr19 52306829 52306833 TEAD2 TRANSFAC yes 113789226
chr19 52306829 52306834 TBP TRANSFAC yes 70874165
chr19 52306829 52306834 TBP TRANSFAC yes 113789227
chr19 52306829 52306835 TMF TRANSFAC yes 70874166
chr19 52306829 52306835 TMF TRANSFAC yes 113789228
chr19 52306831 52306849 IRF2 JASPAR yes 70874167
chr19 52306831 52306849 IRF2 JASPAR yes 113789229
chr19 52306832 52306853 IRF1 JASPAR yes 70874168
chr19 52306832 52306853 IRF1 JASPAR yes 113789230
chr19 52306834 52306849 PRDM1 JASPAR yes 70874169
chr19 52306834 52306849 STAT2 JASPAR yes 70874170
chr19 52306834 52306849 PRDM1 JASPAR yes 113789231
chr19 52306834 52306849 STAT2 JASPAR yes 113789232
chr19 52306835 52306849 STAT1 JASPAR yes 70874171
chr19 52306835 52306849 STAT1 JASPAR yes 113789233
chr19 52306836 52306848 IRF1 JASPAR yes 70874172
chr19 52306836 52306848 IRF1 JASPAR yes 113789234
chr19 52306836 52306850 IRF7 JASPAR yes 70874173
chr19 52306836 52306850 IRF8 JASPAR yes 70874174
chr19 52306836 52306850 IRF7 JASPAR yes 113789235
chr19 52306836 52306850 IRF8 JASPAR yes 113789236
chr19 52306836 52306851 IRF9 JASPAR yes 70874175
chr19 52306836 52306851 IRF9 JASPAR yes 113789237
chr19 52306844 52306855 STAT3 JASPAR yes 70874176
chr19 52306844 52306855 STAT3 JASPAR yes 113789238
chr19 52306844 52306859 MEF2C JASPAR yes 70874177
chr19 52306844 52306859 MEF2C JASPAR yes 113789239
chr19 52306847 52306862 FOXP1 JASPAR yes 70874178
chr19 52306847 52306862 FOXP1 JASPAR yes 113789240
chr19 52306848 52306863 FOXP1 JASPAR yes 70874179
chr19 52306848 52306863 FOXP1 JASPAR yes 113789241
chr19 52306849 52306864 FOXP1 JASPAR yes 70874180
chr19 52306849 52306864 FOXP1 JASPAR yes 113789242
chr19 52306849 52306870 IRF1 JASPAR yes 70874181
chr19 52306849 52306870 IRF1 JASPAR yes 113789243
chr19 52306850 52306865 FOXP1 JASPAR yes 70874182
chr19 52306850 52306865 FOXP1 JASPAR yes 113789244
chr19 52306851 52306866 FOXP1 JASPAR yes 70874183
chr19 52306851 52306866 FOXP1 JASPAR yes 113789245
chr19 52306851 52306872 IRF1 JASPAR yes 70874184
chr19 52306851 52306872 IRF1 JASPAR yes 113789246
chr19 52306852 52306867 FOXP1 JASPAR yes 70874185
chr19 52306852 52306867 FOXP1 JASPAR yes 113789247
chr19 52306860 52306876 SOX8 JASPAR yes 70874186
chr19 52306860 52306876 SOX8 JASPAR yes 113789248
chr19 52306862 52306875 POU2F2 JASPAR yes 70874187
chr19 52306862 52306875 POU2F2 JASPAR yes 113789249
chr19 52306878 52306887 HIC2 JASPAR yes 70874188
chr19 52306878 52306887 HIC2 JASPAR yes 113789250
chr19 52306903 52306917 SPI1 JASPAR yes 70874189
chr19 52306903 52306917 SPI1 JASPAR yes 113789251
chr19 52306911 52306920 SOX9 JASPAR yes 70874190
chr19 52306911 52306920 SOX9 JASPAR yes 113789252
chr19 52306924 52306945 IRF1 JASPAR yes 70874191
chr19 52306924 52306945 IRF1 JASPAR yes 113789253
chr19 52306952 52306967 AR JASPAR yes 70874192
chr19 52306952 52306967 AR JASPAR yes 113789254
chr19 52306972 52306978 GATA3 JASPAR yes 70874193
chr19 52306972 52306978 GATA3 JASPAR yes 113789255
chr19 52306989 52307002 ZBTB18 JASPAR yes 70874194
chr19 52306989 52307002 ZBTB18 JASPAR yes 113789256
chr19 52306999 52307009 POU6F2 JASPAR yes 70874195
chr19 52306999 52307009 POU6F2 JASPAR yes 113789257
chr19 52307000 52307010 EMX1 JASPAR yes 70874196
chr19 52307000 52307010 EMX2 JASPAR yes 70874197
chr19 52307000 52307010 EN2 JASPAR yes 70874198
chr19 52307000 52307010 ESX1 JASPAR yes 70874199
chr19 52307000 52307010 GBX1 JASPAR yes 70874200
chr19 52307000 52307010 GBX2 JASPAR yes 70874201
chr19 52307000 52307010 GSX1 JASPAR yes 70874202
chr19 52307000 52307010 GSX2 JASPAR yes 70874203
chr19 52307000 52307010 HESX1 JASPAR yes 70874204
chr19 52307000 52307010 HOXA2 JASPAR yes 70874205
chr19 52307000 52307010 HOXB2 JASPAR yes 70874206
chr19 52307000 52307010 HOXB3 JASPAR yes 70874207
chr19 52307000 52307010 LBX2 JASPAR yes 70874208
chr19 52307000 52307010 LHX2 JASPAR yes 70874209
chr19 52307000 52307010 LHX6 JASPAR yes 70874210
chr19 52307000 52307010 MEOX1 JASPAR yes 70874211
chr19 52307000 52307010 MEOX2 JASPAR yes 70874212
chr19 52307000 52307010 MIXL1 JASPAR yes 70874213
chr19 52307000 52307010 MNX1 JASPAR yes 70874214
chr19 52307000 52307010 NOTO JASPAR yes 70874215
chr19 52307000 52307010 POU6F1 JASPAR yes 70874216
chr19 52307000 52307010 RAX JASPAR yes 70874217
chr19 52307000 52307010 EMX1 JASPAR yes 113789258
chr19 52307000 52307010 EMX2 JASPAR yes 113789259
chr19 52307000 52307010 EN2 JASPAR yes 113789260
chr19 52307000 52307010 ESX1 JASPAR yes 113789261
chr19 52307000 52307010 GBX1 JASPAR yes 113789262
chr19 52307000 52307010 GBX2 JASPAR yes 113789263
chr19 52307000 52307010 GSX1 JASPAR yes 113789264
chr19 52307000 52307010 GSX2 JASPAR yes 113789265
chr19 52307000 52307010 HESX1 JASPAR yes 113789266
chr19 52307000 52307010 HOXA2 JASPAR yes 113789267
chr19 52307000 52307010 HOXB2 JASPAR yes 113789268
chr19 52307000 52307010 HOXB3 JASPAR yes 113789269
chr19 52307000 52307010 LBX2 JASPAR yes 113789270
chr19 52307000 52307010 LHX2 JASPAR yes 113789271
chr19 52307000 52307010 LHX6 JASPAR yes 113789272
chr19 52307000 52307010 MEOX1 JASPAR yes 113789273
chr19 52307000 52307010 MEOX2 JASPAR yes 113789274
chr19 52307000 52307010 MIXL1 JASPAR yes 113789275
chr19 52307000 52307010 MNX1 JASPAR yes 113789276
chr19 52307000 52307010 NOTO JASPAR yes 113789277
chr19 52307000 52307010 POU6F1 JASPAR yes 113789278
chr19 52307000 52307010 RAX JASPAR yes 113789279
chr19 52307001 52307009 BSX JASPAR yes 70874218
chr19 52307001 52307009 DLX6 JASPAR yes 70874219
chr19 52307001 52307009 EN1 JASPAR yes 70874220
chr19 52307001 52307009 ISX JASPAR yes 70874221
chr19 52307001 52307009 LBX1 JASPAR yes 70874222
chr19 52307001 52307009 LHX9 JASPAR yes 70874223
chr19 52307001 52307009 LMX1A JASPAR yes 70874224
chr19 52307001 52307009 LMX1B JASPAR yes 70874225
chr19 52307001 52307009 NKX6-1 JASPAR yes 70874226
chr19 52307001 52307009 NKX6-2 JASPAR yes 70874227
chr19 52307001 52307009 PAX4 JASPAR yes 70874228
chr19 52307001 52307009 PDX1 JASPAR yes 70874229
chr19 52307001 52307009 PRRX1 JASPAR yes 70874230
chr19 52307001 52307009 RAX2 JASPAR yes 70874231
chr19 52307001 52307009 SHOX JASPAR yes 70874232
chr19 52307001 52307009 UNCX JASPAR yes 70874233
chr19 52307001 52307009 VAX1 JASPAR yes 70874234
chr19 52307001 52307009 VAX2 JASPAR yes 70874235
chr19 52307001 52307009 VSX1 JASPAR yes 70874236
chr19 52307001 52307009 VSX2 JASPAR yes 70874237
chr19 52307001 52307009 BSX JASPAR yes 113789280
chr19 52307001 52307009 DLX6 JASPAR yes 113789281
chr19 52307001 52307009 EN1 JASPAR yes 113789282
chr19 52307001 52307009 ISX JASPAR yes 113789283
chr19 52307001 52307009 LBX1 JASPAR yes 113789284
chr19 52307001 52307009 LHX9 JASPAR yes 113789285
chr19 52307001 52307009 LMX1A JASPAR yes 113789286
chr19 52307001 52307009 LMX1B JASPAR yes 113789287
chr19 52307001 52307009 NKX6-1 JASPAR yes 113789288
chr19 52307001 52307009 NKX6-2 JASPAR yes 113789289
chr19 52307001 52307009 PAX4 JASPAR yes 113789290
chr19 52307001 52307009 PDX1 JASPAR yes 113789291
chr19 52307001 52307009 PRRX1 JASPAR yes 113789292
chr19 52307001 52307009 RAX2 JASPAR yes 113789293
chr19 52307001 52307009 SHOX JASPAR yes 113789294
chr19 52307001 52307009 UNCX JASPAR yes 113789295
chr19 52307001 52307009 VAX1 JASPAR yes 113789296
chr19 52307001 52307009 VAX2 JASPAR yes 113789297
chr19 52307001 52307009 VSX1 JASPAR yes 113789298
chr19 52307001 52307009 VSX2 JASPAR yes 113789299
SNP sites on vista29896[chr19:52306801-52307008]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29896[chr19:52306801-52307008]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 20446
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 99645
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 48478
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 91615
chr19 52359055 52394203 - ZNF577 ENSG00000161551.8 52394203 0.81 1.0 17937 12805
Expression level of Genes
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miRNAs possibly regulated by vista29896[chr19:52306801-52307008]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results