EnhancerDB
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  3. vista29897[chr19:52307277-52307570]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29897[chr19:52307277-52307570]
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Tissue distribution of vista29897
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Transcription factor that possibly regulate vista29897[chr19:52307277-52307570]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52307268 52307282 SPI1 JASPAR yes 70874238
chr19 52307268 52307282 SPI1 JASPAR yes 113789334
chr19 52307277 52307281 YY1 TRANSFAC yes 70874239
chr19 52307277 52307281 YY1 TRANSFAC yes 113789335
chr19 52307309 52307321 TFAP2A JASPAR yes 70874240
chr19 52307309 52307321 TFAP2B JASPAR yes 70874241
chr19 52307309 52307321 TFAP2C JASPAR yes 70874242
chr19 52307309 52307321 TFAP2A JASPAR yes 113789336
chr19 52307309 52307321 TFAP2B JASPAR yes 113789337
chr19 52307309 52307321 TFAP2C JASPAR yes 113789338
chr19 52307337 52307349 PKNOX1 JASPAR yes 70874243
chr19 52307337 52307349 PKNOX2 JASPAR yes 70874244
chr19 52307337 52307349 TGIF1 JASPAR yes 70874245
chr19 52307337 52307349 TGIF2 JASPAR yes 70874246
chr19 52307337 52307349 PKNOX1 JASPAR yes 113789339
chr19 52307337 52307349 PKNOX2 JASPAR yes 113789340
chr19 52307337 52307349 TGIF1 JASPAR yes 113789341
chr19 52307337 52307349 TGIF2 JASPAR yes 113789342
chr19 52307338 52307348 MSC JASPAR yes 70874247
chr19 52307338 52307348 MYF6 JASPAR yes 70874248
chr19 52307338 52307348 MSC JASPAR yes 113789343
chr19 52307338 52307348 MYF6 JASPAR yes 113789344
chr19 52307348 52307351 MYB TRANSFAC yes 70874249
chr19 52307348 52307351 MYB TRANSFAC yes 113789345
chr19 52307355 52307359 YY1 TRANSFAC yes 70874250
chr19 52307355 52307359 YY1 TRANSFAC yes 113789346
chr19 52307356 52307370 JUN JASPAR yes 70874251
chr19 52307356 52307370 JUN JASPAR yes 113789347
chr19 52307385 52307397 SRF JASPAR yes 70874252
chr19 52307385 52307397 SRF JASPAR yes 113789348
chr19 52307388 52307392 TEAD2 TRANSFAC yes 70874253
chr19 52307388 52307392 TEAD2 TRANSFAC yes 113789349
chr19 52307394 52307413 RFX2 JASPAR yes 70874254
chr19 52307394 52307413 RFX2 JASPAR yes 113789350
chr19 52307398 52307414 RFX5 JASPAR yes 70874255
chr19 52307398 52307414 RFX5 JASPAR yes 113789351
chr19 52307399 52307418 RFX2 JASPAR yes 70874256
chr19 52307399 52307418 RFX2 JASPAR yes 113789352
chr19 52307446 52307466 ESR1 JASPAR yes 70874257
chr19 52307446 52307466 ESR1 JASPAR yes 113789353
chr19 52307450 52307468 ESR1 JASPAR yes 70874258
chr19 52307450 52307468 ESR1 JASPAR yes 113789354
chr19 52307451 52307466 ESR2 JASPAR yes 70874259
chr19 52307451 52307466 ESR2 JASPAR yes 113789355
chr19 52307451 52307471 ESR1 JASPAR yes 70874260
chr19 52307451 52307471 ESR1 JASPAR yes 113789356
chr19 52307453 52307464 NFE2L2 JASPAR yes 70874261
chr19 52307453 52307464 NFE2L2 JASPAR yes 113789357
chr19 52307460 52307474 RXRB JASPAR yes 70874262
chr19 52307460 52307474 RXRG JASPAR yes 70874263
chr19 52307460 52307474 RXRB JASPAR yes 113789358
chr19 52307460 52307474 RXRG JASPAR yes 113789359
chr19 52307460 52307475 NR2C2 JASPAR yes 70874264
chr19 52307460 52307475 NR2C2 JASPAR yes 113789360
chr19 52307466 52307480 RORA JASPAR yes 70874265
chr19 52307466 52307480 RORA JASPAR yes 113789361
chr19 52307471 52307486 STAT2 JASPAR yes 70874266
chr19 52307471 52307486 STAT2 JASPAR yes 113789362
chr19 52307472 52307486 STAT1 JASPAR yes 70874267
chr19 52307472 52307486 STAT1 JASPAR yes 113789363
chr19 52307485 52307500 RUNX2 JASPAR yes 70874268
chr19 52307485 52307500 RUNX2 JASPAR yes 113789364
chr19 52307502 52307517 FOXP1 JASPAR yes 70874269
chr19 52307502 52307517 FOXP1 JASPAR yes 113789365
chr19 52307503 52307518 FOXP1 JASPAR yes 70874270
chr19 52307503 52307518 FOXP1 JASPAR yes 113789366
chr19 52307503 52307524 IRF1 JASPAR yes 70874271
chr19 52307503 52307524 IRF1 JASPAR yes 113789367
chr19 52307504 52307519 FOXP1 JASPAR yes 70874272
chr19 52307504 52307519 FOXP1 JASPAR yes 113789368
chr19 52307506 52307521 FOXP1 JASPAR yes 70874273
chr19 52307506 52307521 FOXP1 JASPAR yes 113789369
chr19 52307509 52307530 IRF1 JASPAR yes 70874274
chr19 52307509 52307530 IRF1 JASPAR yes 113789370
chr19 52307513 52307527 SPI1 JASPAR yes 70874275
chr19 52307513 52307527 SPI1 JASPAR yes 113789371
chr19 52307517 52307524 SPIB JASPAR yes 70874276
chr19 52307517 52307524 SPIB JASPAR yes 113789372
chr19 52307520 52307534 NR2F1 JASPAR yes 70874277
chr19 52307520 52307534 NR2F1 JASPAR yes 113789373
chr19 52307533 52307540 NKX3-1 JASPAR yes 70874278
chr19 52307533 52307540 NKX3-1 JASPAR yes 113789374
chr19 52307541 52307545 LFA1 TRANSFAC yes 70874279
chr19 52307541 52307545 LFA1 TRANSFAC yes 113789375
chr19 52307557 52307571 XBP1 JASPAR yes 70874280
chr19 52307557 52307571 XBP1 JASPAR yes 113789376
SNP sites on vista29897[chr19:52307277-52307570]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29897[chr19:52307277-52307570]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 19970
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 0
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 48002
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 91139
chr19 52359055 52394203 - ZNF577 ENSG00000161551.8 52394203 0.81 1.0 17937 13367
Expression level of Genes
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miRNAs possibly regulated by vista29897[chr19:52307277-52307570]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results