EnhancerDB
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  3. vista29898[chr19:52308817-52308923]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29898[chr19:52308817-52308923]
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Tissue distribution of vista29898
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Transcription factor that possibly regulate vista29898[chr19:52308817-52308923]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52308814 52308822 MEIS2 JASPAR yes 70874281
chr19 52308814 52308822 MEIS3 JASPAR yes 70874282
chr19 52308814 52308822 MEIS2 JASPAR yes 113789569
chr19 52308814 52308822 MEIS3 JASPAR yes 113789570
chr19 52308857 52308872 RFX5 JASPAR yes 70874283
chr19 52308857 52308872 RFX5 JASPAR yes 113789571
chr19 52308861 52308876 RUNX2 JASPAR yes 70874284
chr19 52308861 52308876 RUNX2 JASPAR yes 113789572
chr19 52308862 52308865 MYB TRANSFAC yes 70874285
chr19 52308862 52308865 MYB TRANSFAC yes 113789573
chr19 52308862 52308871 RUNX2 JASPAR yes 70874286
chr19 52308862 52308871 RUNX2 JASPAR yes 113789574
chr19 52308862 52308872 RUNX3 JASPAR yes 70874287
chr19 52308862 52308872 RUNX3 JASPAR yes 113789575
chr19 52308862 52308873 RUNX1 JASPAR yes 70874288
chr19 52308862 52308873 RUNX1 JASPAR yes 113789576
chr19 52308878 52308883 H4TF1 TRANSFAC yes 70874289
chr19 52308878 52308883 H4TF1 TRANSFAC yes 113789577
chr19 52308878 52308889 CEBPB JASPAR yes 70874290
chr19 52308878 52308889 CEBPB JASPAR yes 113789578
chr19 52308879 52308890 CEBPA JASPAR yes 70874291
chr19 52308879 52308890 CEBPA JASPAR yes 113789579
chr19 52308890 52308900 NKX2-3 JASPAR yes 70874292
chr19 52308890 52308900 NKX2-3 JASPAR yes 113789580
chr19 52308891 52308900 NKX2-8 JASPAR yes 70874293
chr19 52308891 52308900 NKX2-8 JASPAR yes 113789581
chr19 52308904 52308907 MYB TRANSFAC yes 70874294
chr19 52308904 52308907 MYB TRANSFAC yes 113789582
SNP sites on vista29898[chr19:52308817-52308923]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29898[chr19:52308817-52308923]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 18430
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 98546
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 46462
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 89599
chr19 52359055 52394203 - ZNF577 ENSG00000161551.8 52394203 0.81 1.0 17937 14720
chr19 52392477 52408293 - ZNF649 ENSG00000198093.6 52408293 0.78 0.99 17938 630
Expression level of Genes
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miRNAs possibly regulated by vista29898[chr19:52308817-52308923]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results