EnhancerDB
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  3. vista29899[chr19:52310413-52310785]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29899[chr19:52310413-52310785]
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Tissue distribution of vista29899
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Transcription factor that possibly regulate vista29899[chr19:52310413-52310785]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52310325 52311084 E2F1 UCSC Txn Factor no Conserved 108426873
chr19 52310399 52310419 PPARG JASPAR yes 70874295
chr19 52310399 52310419 PPARG JASPAR yes 113789834
chr19 52310405 52310414 SOX9 JASPAR yes 70874296
chr19 52310405 52310414 SOX9 JASPAR yes 113789835
chr19 52310438 52310442 YY1 TRANSFAC yes 70874297
chr19 52310438 52310442 YY1 TRANSFAC yes 113789836
chr19 52310455 52310461 GATA3 JASPAR yes 70874298
chr19 52310455 52310461 GATA3 JASPAR yes 113789837
chr19 52310457 52310470 ELF1 JASPAR yes 70874299
chr19 52310457 52310470 ELF1 JASPAR yes 113789838
chr19 52310458 52310470 EHF JASPAR yes 70874300
chr19 52310458 52310470 ELF1 JASPAR yes 70874301
chr19 52310458 52310470 ELF4 JASPAR yes 70874302
chr19 52310458 52310470 EHF JASPAR yes 113789839
chr19 52310458 52310470 ELF1 JASPAR yes 113789840
chr19 52310458 52310470 ELF4 JASPAR yes 113789841
chr19 52310458 52310471 ELF3 JASPAR yes 70874303
chr19 52310458 52310471 ELF3 JASPAR yes 113789842
chr19 52310459 52310470 ELF5 JASPAR yes 70874304
chr19 52310459 52310470 ELF5 JASPAR yes 113789843
chr19 52310460 52310470 ERF JASPAR yes 70874305
chr19 52310460 52310470 ETS1 JASPAR yes 70874306
chr19 52310460 52310470 ETV6 JASPAR yes 70874307
chr19 52310460 52310470 GABPA JASPAR yes 70874308
chr19 52310460 52310470 ERF JASPAR yes 113789844
chr19 52310460 52310470 ETS1 JASPAR yes 113789845
chr19 52310460 52310470 ETV6 JASPAR yes 113789846
chr19 52310460 52310470 GABPA JASPAR yes 113789847
chr19 52310460 52310471 ELK4 JASPAR yes 70874309
chr19 52310460 52310471 FLI1 JASPAR yes 70874310
chr19 52310460 52310471 ELK4 JASPAR yes 113789848
chr19 52310460 52310471 FLI1 JASPAR yes 113789849
chr19 52310461 52310469 EHF JASPAR yes 70874311
chr19 52310461 52310469 FEV JASPAR yes 70874312
chr19 52310461 52310469 EHF JASPAR yes 113789850
chr19 52310461 52310469 FEV JASPAR yes 113789851
chr19 52310462 52310469 SPI1 JASPAR yes 70874313
chr19 52310462 52310469 SPI1 JASPAR yes 113789852
chr19 52310462 52310482 RREB1 JASPAR yes 70874314
chr19 52310462 52310482 RREB1 JASPAR yes 113789853
chr19 52310463 52310483 RREB1 JASPAR yes 70874315
chr19 52310463 52310483 RREB1 JASPAR yes 113789854
chr19 52310467 52310477 SP1 JASPAR yes 70874316
chr19 52310467 52310477 ZNF740 JASPAR yes 70874317
chr19 52310467 52310477 SP1 JASPAR yes 113789855
chr19 52310467 52310477 ZNF740 JASPAR yes 113789856
chr19 52310467 52310487 RREB1 JASPAR yes 70874318
chr19 52310467 52310487 RREB1 JASPAR yes 113789857
chr19 52310468 52310478 SP1 JASPAR yes 70874319
chr19 52310468 52310478 ZNF740 JASPAR yes 70874320
chr19 52310468 52310478 SP1 JASPAR yes 113789858
chr19 52310468 52310478 ZNF740 JASPAR yes 113789859
chr19 52310469 52310479 ZNF740 JASPAR yes 70874321
chr19 52310469 52310479 ZNF740 JASPAR yes 113789860
chr19 52310470 52310480 ZNF740 JASPAR yes 70874322
chr19 52310470 52310480 ZNF740 JASPAR yes 113789861
chr19 52310471 52310481 SP1 JASPAR yes 70874323
chr19 52310471 52310481 SP1 JASPAR yes 113789862
chr19 52310472 52310484 ZBTB7B JASPAR yes 70874324
chr19 52310472 52310484 ZBTB7C JASPAR yes 70874325
chr19 52310472 52310484 ZBTB7B JASPAR yes 113789863
chr19 52310472 52310484 ZBTB7C JASPAR yes 113789864
chr19 52310473 52310485 ZBTB7A JASPAR yes 70874326
chr19 52310473 52310485 ZBTB7A JASPAR yes 113789865
chr19 52310476 52310493 BCL6B JASPAR yes 70874327
chr19 52310476 52310493 BCL6B JASPAR yes 113789866
chr19 52310483 52310496 SMAD2 JASPAR yes 70874328
chr19 52310483 52310496 SMAD2 JASPAR yes 113789867
chr19 52310494 52310505 FOSL1 JASPAR yes 70874329
chr19 52310494 52310505 FOSL1 JASPAR yes 113789868
chr19 52310523 52310538 MEF2C JASPAR yes 70874330
chr19 52310523 52310538 MEF2C JASPAR yes 113789869
chr19 52310545 52310550 H4TF1 TRANSFAC yes 70874331
chr19 52310545 52310550 H4TF1 TRANSFAC yes 113789870
chr19 52310545 52310556 CEBPB JASPAR yes 70874332
chr19 52310545 52310556 CEBPB JASPAR yes 113789871
chr19 52310546 52310557 CEBPA JASPAR yes 70874333
chr19 52310546 52310557 CEBPA JASPAR yes 113789872
chr19 52310559 52310562 MYB TRANSFAC yes 70874334
chr19 52310559 52310562 MYB TRANSFAC yes 113789873
chr19 52310573 52310576 MYB TRANSFAC yes 70874335
chr19 52310573 52310576 MYB TRANSFAC yes 113789874
chr19 52310597 52310611 GLIS3 JASPAR yes 70874336
chr19 52310597 52310611 GLIS3 JASPAR yes 113789875
chr19 52310639 52310650 FLI1 JASPAR yes 70874337
chr19 52310639 52310650 FLI1 JASPAR yes 113789876
chr19 52310652 52310666 FOXF2 JASPAR yes 70874338
chr19 52310652 52310666 FOXF2 JASPAR yes 113789877
chr19 52310655 52310666 FOXP2 JASPAR yes 70874339
chr19 52310655 52310666 FOXP2 JASPAR yes 113789878
chr19 52310663 52310684 MAFG JASPAR yes 70874340
chr19 52310663 52310684 MAFG JASPAR yes 113789879
chr19 52310689 52310701 TEAD1 JASPAR yes 70874341
chr19 52310689 52310701 TEAD1 JASPAR yes 113789880
chr19 52310691 52310701 TEAD1 JASPAR yes 70874342
chr19 52310691 52310701 TEAD4 JASPAR yes 70874343
chr19 52310691 52310701 TEAD1 JASPAR yes 113789881
chr19 52310691 52310701 TEAD4 JASPAR yes 113789882
chr19 52310691 52310709 MAFF JASPAR yes 70874344
chr19 52310691 52310709 MAFF JASPAR yes 113789883
chr19 52310692 52310700 TEAD3 JASPAR yes 70874345
chr19 52310692 52310700 TEAD3 JASPAR yes 113789884
chr19 52310693 52310708 MAFK JASPAR yes 70874346
chr19 52310693 52310708 MAFK JASPAR yes 113789885
chr19 52310706 52310710 ESR1 TRANSFAC yes 70874347
chr19 52310706 52310710 ESR1 TRANSFAC yes 113789886
chr19 52310711 52310725 EBF1 JASPAR yes 70874348
chr19 52310711 52310725 EBF1 JASPAR yes 113789887
chr19 52310712 52310723 EBF1 JASPAR yes 70874349
chr19 52310712 52310723 EBF1 JASPAR yes 113789888
chr19 52310713 52310724 EBF1 JASPAR yes 70874350
chr19 52310713 52310724 EBF1 JASPAR yes 113789889
chr19 52310728 52310732 H4TF2 TRANSFAC yes 70874351
chr19 52310728 52310732 H4TF2 TRANSFAC yes 113789890
chr19 52310736 52310741 MYC TRANSFAC yes 70874352
chr19 52310736 52310741 MYC TRANSFAC yes 113789891
chr19 52310772 52310784 PKNOX1 JASPAR yes 70874353
chr19 52310772 52310784 PKNOX2 JASPAR yes 70874354
chr19 52310772 52310784 PKNOX1 JASPAR yes 113789892
chr19 52310772 52310784 PKNOX2 JASPAR yes 113789893
chr19 52310773 52310783 TFAP4 JASPAR yes 70874355
chr19 52310773 52310783 TFAP4 JASPAR yes 113789894
SNP sites on vista29899[chr19:52310413-52310785]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29899[chr19:52310413-52310785]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 16834
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 96950
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 44866
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 88003
chr19 52359055 52394203 - ZNF577 ENSG00000161551.8 52394203 0.81 1.0 17937 16582
chr19 52392477 52408293 - ZNF649 ENSG00000198093.6 52408293 0.78 0.99 17938 2492
Expression level of Genes
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miRNAs possibly regulated by vista29899[chr19:52310413-52310785]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results