EnhancerDB
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  3. vista29900[chr19:52313085-52313438]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29900[chr19:52313085-52313438]
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Tissue distribution of vista29900
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Transcription factor that possibly regulate vista29900[chr19:52313085-52313438]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52313088 52313103 TFAP2A JASPAR yes 70874356
chr19 52313088 52313103 TFAP2A JASPAR yes 113790217
chr19 52313134 52313145 NFKB1 JASPAR yes 70874357
chr19 52313134 52313145 NFKB1 JASPAR yes 113790218
chr19 52313135 52313145 NFKB1 JASPAR yes 70874358
chr19 52313135 52313145 NFKB1 JASPAR yes 113790219
chr19 52313135 52313146 NFKB1 JASPAR yes 70874359
chr19 52313135 52313146 NFKB1 JASPAR yes 113790220
chr19 52313145 52313154 SOX9 JASPAR yes 70874360
chr19 52313145 52313154 SOX9 JASPAR yes 113790221
chr19 52313156 52313161 SP1 TRANSFAC yes 70874361
chr19 52313156 52313161 SP1 TRANSFAC yes 113790222
chr19 52313164 52313168 H4TF2 TRANSFAC yes 70874362
chr19 52313164 52313168 H4TF2 TRANSFAC yes 113790223
chr19 52313181 52313185 YY1 TRANSFAC yes 70874363
chr19 52313181 52313185 YY1 TRANSFAC yes 113790224
chr19 52313181 52313196 STAT1 JASPAR yes 70874364
chr19 52313181 52313196 STAT1 JASPAR yes 113790225
chr19 52313183 52313194 STAT1 JASPAR yes 70874365
chr19 52313183 52313194 STAT3 JASPAR yes 70874366
chr19 52313183 52313194 STAT1 JASPAR yes 113790226
chr19 52313183 52313194 STAT3 JASPAR yes 113790227
chr19 52313185 52313200 ZIC3 JASPAR yes 70874367
chr19 52313185 52313200 ZIC4 JASPAR yes 70874368
chr19 52313185 52313200 ZIC3 JASPAR yes 113790228
chr19 52313185 52313200 ZIC4 JASPAR yes 113790229
chr19 52313186 52313200 ZIC1 JASPAR yes 70874369
chr19 52313186 52313200 ZIC1 JASPAR yes 113790230
chr19 52313197 52313209 YY1 JASPAR yes 70874370
chr19 52313197 52313209 YY1 JASPAR yes 113790231
chr19 52313204 52313217 ATF4 JASPAR yes 70874371
chr19 52313204 52313217 ATF4 JASPAR yes 113790232
chr19 52313206 52313219 DUXA JASPAR yes 70874372
chr19 52313206 52313219 DUXA JASPAR yes 113790233
chr19 52313207 52313218 DUX4 JASPAR yes 70874373
chr19 52313207 52313218 DUX4 JASPAR yes 113790234
chr19 52313226 52313235 VENTX JASPAR yes 70874374
chr19 52313226 52313235 VENTX JASPAR yes 113790235
chr19 52313226 52313236 EVX1 JASPAR yes 70874375
chr19 52313226 52313236 LHX6 JASPAR yes 70874376
chr19 52313226 52313236 EVX1 JASPAR yes 113790236
chr19 52313226 52313236 LHX6 JASPAR yes 113790237
chr19 52313241 52313245 YY1 TRANSFAC yes 70874377
chr19 52313241 52313245 YY1 TRANSFAC yes 113790238
chr19 52313241 52313252 ETV2 JASPAR yes 70874378
chr19 52313241 52313252 ETV2 JASPAR yes 113790239
chr19 52313241 52313255 SPIC JASPAR yes 70874379
chr19 52313241 52313255 SPIC JASPAR yes 113790240
chr19 52313242 52313250 FEV JASPAR yes 70874380
chr19 52313242 52313250 FEV JASPAR yes 113790241
chr19 52313244 52313251 SPIB JASPAR yes 70874381
chr19 52313244 52313251 SPIB JASPAR yes 113790242
chr19 52313250 52313262 DBP JASPAR yes 70874382
chr19 52313250 52313262 HLF JASPAR yes 70874383
chr19 52313250 52313262 TEF JASPAR yes 70874384
chr19 52313250 52313262 DBP JASPAR yes 113790243
chr19 52313250 52313262 HLF JASPAR yes 113790244
chr19 52313250 52313262 TEF JASPAR yes 113790245
chr19 52313251 52313261 CEBPB JASPAR yes 70874385
chr19 52313251 52313261 CEBPD JASPAR yes 70874386
chr19 52313251 52313261 CEBPE JASPAR yes 70874387
chr19 52313251 52313261 CEBPG JASPAR yes 70874388
chr19 52313251 52313261 CEBPB JASPAR yes 113790246
chr19 52313251 52313261 CEBPD JASPAR yes 113790247
chr19 52313251 52313261 CEBPE JASPAR yes 113790248
chr19 52313251 52313261 CEBPG JASPAR yes 113790249
chr19 52313257 52313272 HNF4G JASPAR yes 70874389
chr19 52313257 52313272 HNF4G JASPAR yes 113790250
chr19 52313258 52313273 HNF4A JASPAR yes 70874390
chr19 52313258 52313273 HNF4A JASPAR yes 113790251
chr19 52313262 52313268 SOX10 JASPAR yes 70874391
chr19 52313262 52313268 SOX10 JASPAR yes 113790252
chr19 52313274 52313278 YY1 TRANSFAC yes 70874392
chr19 52313274 52313278 YY1 TRANSFAC yes 113790253
chr19 52313277 52313287 NFATC3 JASPAR yes 70874393
chr19 52313277 52313287 NFATC3 JASPAR yes 113790254
chr19 52313278 52313285 NFATC2 JASPAR yes 70874394
chr19 52313278 52313285 NFATC2 JASPAR yes 113790255
chr19 52313288 52313293 SP1 TRANSFAC yes 70874395
chr19 52313288 52313293 SP1 TRANSFAC yes 113790256
chr19 52313292 52313296 LFA1 TRANSFAC yes 70874396
chr19 52313292 52313296 LFA1 TRANSFAC yes 113790257
chr19 52313308 52313312 H4TF2 TRANSFAC yes 70874397
chr19 52313308 52313312 H4TF2 TRANSFAC yes 113790258
chr19 52313333 52313343 TEAD1 JASPAR yes 70874398
chr19 52313333 52313343 TEAD4 JASPAR yes 70874399
chr19 52313333 52313343 TEAD1 JASPAR yes 113790259
chr19 52313333 52313343 TEAD4 JASPAR yes 113790260
chr19 52313334 52313342 TEAD3 JASPAR yes 70874400
chr19 52313334 52313342 TEAD3 JASPAR yes 113790261
chr19 52313337 52313342 ETS2 TRANSFAC yes 70874401
chr19 52313337 52313342 ETS2 TRANSFAC yes 113790262
chr19 52313345 52313361 SOX8 JASPAR yes 70874402
chr19 52313345 52313361 SOX8 JASPAR yes 113790263
chr19 52313360 52313371 TBX20 JASPAR yes 70874403
chr19 52313360 52313371 TBX20 JASPAR yes 113790264
chr19 52313369 52313373 TEAD2 TRANSFAC yes 70874404
chr19 52313369 52313373 TEAD2 TRANSFAC yes 113790265
chr19 52313371 52313374 MYB TRANSFAC yes 70874405
chr19 52313371 52313374 MYB TRANSFAC yes 113790266
chr19 52313374 52313378 YY1 TRANSFAC yes 70874406
chr19 52313374 52313378 YY1 TRANSFAC yes 113790267
chr19 52313378 52313396 SRF JASPAR yes 70874407
chr19 52313378 52313396 SRF JASPAR yes 113790268
chr19 52313390 52313403 NR2F1 JASPAR yes 70874408
chr19 52313390 52313403 NR2F1 JASPAR yes 113790269
chr19 52313393 52313408 HNF4A JASPAR yes 70874409
chr19 52313393 52313408 HNF4A JASPAR yes 113790270
chr19 52313394 52313408 NR2F1 JASPAR yes 70874410
chr19 52313394 52313408 RXRB JASPAR yes 70874411
chr19 52313394 52313408 RXRG JASPAR yes 70874412
chr19 52313394 52313408 NR2F1 JASPAR yes 113790271
chr19 52313394 52313408 RXRB JASPAR yes 113790272
chr19 52313394 52313408 RXRG JASPAR yes 113790273
chr19 52313394 52313409 HNF4G JASPAR yes 70874413
chr19 52313394 52313409 HNF4G JASPAR yes 113790274
SNP sites on vista29900[chr19:52313085-52313438]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29900[chr19:52313085-52313438]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 14162
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 94278
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 42194
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 85331
chr19 52359055 52394203 - ZNF577 ENSG00000161551.8 52394203 0.81 1.0 17937 19235
chr19 52392477 52408293 - ZNF649 ENSG00000198093.6 52408293 0.78 0.99 17938 5145
Expression level of Genes
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miRNAs possibly regulated by vista29900[chr19:52313085-52313438]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results