EnhancerDB
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  3. vista29904[chr19:52323338-52323678]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29904[chr19:52323338-52323678]
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Tissue distribution of vista29904
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Transcription factor that possibly regulate vista29904[chr19:52323338-52323678]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52323331 52323341 POU6F2 JASPAR yes 70874552
chr19 52323331 52323341 POU6F2 JASPAR yes 113790412
chr19 52323332 52323342 GSX1 JASPAR yes 70874553
chr19 52323332 52323342 GSX2 JASPAR yes 70874554
chr19 52323332 52323342 GSX1 JASPAR yes 113790413
chr19 52323332 52323342 GSX2 JASPAR yes 113790414
chr19 52323332 52323343 HOXC13 JASPAR yes 70874555
chr19 52323332 52323343 HOXC13 JASPAR yes 113790415
chr19 52323333 52323341 NKX6-1 JASPAR yes 70874556
chr19 52323333 52323341 NKX6-2 JASPAR yes 70874557
chr19 52323333 52323341 NKX6-1 JASPAR yes 113790416
chr19 52323333 52323341 NKX6-2 JASPAR yes 113790417
chr19 52323333 52323343 HOXC10 JASPAR yes 70874558
chr19 52323333 52323343 HOXD13 JASPAR yes 70874559
chr19 52323333 52323343 HOXC10 JASPAR yes 113790418
chr19 52323333 52323343 HOXD13 JASPAR yes 113790419
chr19 52323348 52323359 ESRRB JASPAR yes 70874560
chr19 52323348 52323359 ESRRB JASPAR yes 113790420
chr19 52323353 52323359 YY1 JASPAR yes 70874561
chr19 52323353 52323359 YY1 JASPAR yes 113790421
chr19 52323355 52323367 NHLH1 JASPAR yes 70874562
chr19 52323355 52323367 NHLH1 JASPAR yes 113790422
chr19 52323356 52323366 TFAP4 JASPAR yes 70874563
chr19 52323356 52323366 TFAP4 JASPAR yes 113790423
chr19 52323373 52323387 SPI1 JASPAR yes 70874564
chr19 52323373 52323387 SPI1 JASPAR yes 113790424
chr19 52323374 52323387 ELF1 JASPAR yes 70874565
chr19 52323374 52323387 ELF1 JASPAR yes 113790425
chr19 52323377 52323384 SPIB JASPAR yes 70874566
chr19 52323377 52323384 SPIB JASPAR yes 113790426
chr19 52323377 52323387 ETV6 JASPAR yes 70874567
chr19 52323377 52323387 ETV6 JASPAR yes 113790427
chr19 52323377 52323388 FLI1 JASPAR yes 70874568
chr19 52323377 52323388 FLI1 JASPAR yes 113790428
chr19 52323378 52323386 EHF JASPAR yes 70874569
chr19 52323378 52323386 EHF JASPAR yes 113790429
chr19 52323379 52323386 SPI1 JASPAR yes 70874570
chr19 52323379 52323386 SPI1 JASPAR yes 113790430
chr19 52323382 52323400 RARA JASPAR yes 70874571
chr19 52323382 52323400 RARA JASPAR yes 113790431
chr19 52323393 52323405 E2F8 JASPAR yes 70874572
chr19 52323393 52323405 E2F8 JASPAR yes 113790432
chr19 52323400 52323414 SPI1 JASPAR yes 70874573
chr19 52323400 52323414 SPI1 JASPAR yes 113790433
chr19 52323419 52323434 MEF2C JASPAR yes 70874574
chr19 52323419 52323434 MEF2C JASPAR yes 113790434
chr19 52323422 52323426 YY1 TRANSFAC yes 70874575
chr19 52323422 52323426 YY1 TRANSFAC yes 113790435
chr19 52323441 52323449 MGA JASPAR yes 70874576
chr19 52323441 52323449 TBX1 JASPAR yes 70874577
chr19 52323441 52323449 MGA JASPAR yes 113790436
chr19 52323441 52323449 TBX1 JASPAR yes 113790437
chr19 52323441 52323453 HES5 JASPAR yes 70874578
chr19 52323441 52323453 HES7 JASPAR yes 70874579
chr19 52323441 52323453 HES5 JASPAR yes 113790438
chr19 52323441 52323453 HES7 JASPAR yes 113790439
chr19 52323442 52323452 BHLHE40 JASPAR yes 70874580
chr19 52323442 52323452 CLOCK JASPAR yes 70874581
chr19 52323442 52323452 HEY1 JASPAR yes 70874582
chr19 52323442 52323452 MAX JASPAR yes 70874583
chr19 52323442 52323452 MNT JASPAR yes 70874584
chr19 52323442 52323452 BHLHE40 JASPAR yes 113790440
chr19 52323442 52323452 CLOCK JASPAR yes 113790441
chr19 52323442 52323452 HEY1 JASPAR yes 113790442
chr19 52323442 52323452 MAX JASPAR yes 113790443
chr19 52323442 52323452 MNT JASPAR yes 113790444
chr19 52323444 52323449 MYC TRANSFAC yes 70874585
chr19 52323444 52323449 USF1 TRANSFAC yes 70874586
chr19 52323444 52323449 USF2 TRANSFAC yes 70874587
chr19 52323444 52323449 MYC TRANSFAC yes 113790445
chr19 52323444 52323449 USF1 TRANSFAC yes 113790446
chr19 52323444 52323449 USF2 TRANSFAC yes 113790447
chr19 52323468 52323471 MYB TRANSFAC yes 70874588
chr19 52323468 52323471 MYB TRANSFAC yes 113790448
chr19 52323468 52323481 ELF1 JASPAR yes 70874589
chr19 52323468 52323481 ELF1 JASPAR yes 113790449
chr19 52323469 52323481 EHF JASPAR yes 70874590
chr19 52323469 52323481 ELF1 JASPAR yes 70874591
chr19 52323469 52323481 ELF4 JASPAR yes 70874592
chr19 52323469 52323481 EHF JASPAR yes 113790450
chr19 52323469 52323481 ELF1 JASPAR yes 113790451
chr19 52323469 52323481 ELF4 JASPAR yes 113790452
chr19 52323469 52323482 ELF3 JASPAR yes 70874593
chr19 52323469 52323482 ELF3 JASPAR yes 113790453
chr19 52323470 52323481 ELF5 JASPAR yes 70874594
chr19 52323470 52323481 ELF5 JASPAR yes 113790454
chr19 52323472 52323477 ETS2 TRANSFAC yes 70874595
chr19 52323472 52323477 ETS2 TRANSFAC yes 113790455
chr19 52323472 52323480 FEV JASPAR yes 70874596
chr19 52323472 52323480 FEV JASPAR yes 113790456
chr19 52323473 52323480 SPI1 JASPAR yes 70874597
chr19 52323473 52323480 SPI1 JASPAR yes 113790457
chr19 52323484 52323494 NFATC3 JASPAR yes 70874598
chr19 52323484 52323494 NFATC3 JASPAR yes 113790458
chr19 52323487 52323503 POU4F2 JASPAR yes 70874599
chr19 52323487 52323503 POU4F3 JASPAR yes 70874600
chr19 52323487 52323503 POU4F2 JASPAR yes 113790459
chr19 52323487 52323503 POU4F3 JASPAR yes 113790460
chr19 52323490 52323494 YY1 TRANSFAC yes 70874601
chr19 52323490 52323494 YY1 TRANSFAC yes 113790461
chr19 52323500 52323510 TEAD1 JASPAR yes 70874602
chr19 52323500 52323510 TEAD4 JASPAR yes 70874603
chr19 52323500 52323510 TEAD1 JASPAR yes 113790462
chr19 52323500 52323510 TEAD4 JASPAR yes 113790463
chr19 52323500 52323512 TEAD1 JASPAR yes 70874604
chr19 52323500 52323512 TEAD1 JASPAR yes 113790464
chr19 52323501 52323509 TEAD3 JASPAR yes 70874605
chr19 52323501 52323509 TEAD3 JASPAR yes 113790465
chr19 52323506 52323510 H1TF2 TRANSFAC yes 70874606
chr19 52323506 52323510 NFE TRANSFAC yes 70874607
chr19 52323506 52323510 SRF TRANSFAC yes 70874608
chr19 52323506 52323510 H1TF2 TRANSFAC yes 113790466
chr19 52323506 52323510 NFE TRANSFAC yes 113790467
chr19 52323506 52323510 SRF TRANSFAC yes 113790468
chr19 52323526 52323531 MYC TRANSFAC yes 70874609
chr19 52323526 52323531 MYC TRANSFAC yes 113790469
chr19 52323546 52323557 ESRRA JASPAR yes 70874610
chr19 52323546 52323557 ESRRA JASPAR yes 113790470
chr19 52323552 52323557 MYB TRANSFAC yes 70874611
chr19 52323552 52323557 MYB TRANSFAC yes 113790471
chr19 52323563 52323573 ETV6 JASPAR yes 70874612
chr19 52323563 52323573 ETV6 JASPAR yes 113790472
chr19 52323593 52323601 RHOXF1 JASPAR yes 70874613
chr19 52323593 52323601 RHOXF1 JASPAR yes 113790473
chr19 52323611 52323615 YY1 TRANSFAC yes 70874614
chr19 52323611 52323615 YY1 TRANSFAC yes 113790474
chr19 52323628 52323641 ATF4 JASPAR yes 70874615
chr19 52323628 52323641 ATF4 JASPAR yes 113790475
chr19 52323634 52323644 ALX3 JASPAR yes 70874616
chr19 52323634 52323644 GSX1 JASPAR yes 70874617
chr19 52323634 52323644 GSX2 JASPAR yes 70874618
chr19 52323634 52323644 HOXB2 JASPAR yes 70874619
chr19 52323634 52323644 HOXB3 JASPAR yes 70874620
chr19 52323634 52323644 MEOX2 JASPAR yes 70874621
chr19 52323634 52323644 MIXL1 JASPAR yes 70874622
chr19 52323634 52323644 MNX1 JASPAR yes 70874623
chr19 52323634 52323644 ALX3 JASPAR yes 113790476
chr19 52323634 52323644 GSX1 JASPAR yes 113790477
chr19 52323634 52323644 GSX2 JASPAR yes 113790478
chr19 52323634 52323644 HOXB2 JASPAR yes 113790479
chr19 52323634 52323644 HOXB3 JASPAR yes 113790480
chr19 52323634 52323644 MEOX2 JASPAR yes 113790481
chr19 52323634 52323644 MIXL1 JASPAR yes 113790482
chr19 52323634 52323644 MNX1 JASPAR yes 113790483
chr19 52323635 52323643 DLX6 JASPAR yes 70874624
chr19 52323635 52323643 EN1 JASPAR yes 70874625
chr19 52323635 52323643 LBX1 JASPAR yes 70874626
chr19 52323635 52323643 PAX4 JASPAR yes 70874627
chr19 52323635 52323643 PDX1 JASPAR yes 70874628
chr19 52323635 52323643 VAX1 JASPAR yes 70874629
chr19 52323635 52323643 VAX2 JASPAR yes 70874630
chr19 52323635 52323643 VSX1 JASPAR yes 70874631
chr19 52323635 52323643 VSX2 JASPAR yes 70874632
chr19 52323635 52323643 DLX6 JASPAR yes 113790484
chr19 52323635 52323643 EN1 JASPAR yes 113790485
chr19 52323635 52323643 LBX1 JASPAR yes 113790486
chr19 52323635 52323643 PAX4 JASPAR yes 113790487
chr19 52323635 52323643 PDX1 JASPAR yes 113790488
chr19 52323635 52323643 VAX1 JASPAR yes 113790489
chr19 52323635 52323643 VAX2 JASPAR yes 113790490
chr19 52323635 52323643 VSX1 JASPAR yes 113790491
chr19 52323635 52323643 VSX2 JASPAR yes 113790492
chr19 52323643 52323654 CDX2 JASPAR yes 70874633
chr19 52323643 52323654 CDX2 JASPAR yes 113790493
chr19 52323644 52323655 HOXA10 JASPAR yes 70874634
chr19 52323644 52323655 HOXA10 JASPAR yes 113790494
chr19 52323645 52323654 CDX1 JASPAR yes 70874635
chr19 52323645 52323654 CDX1 JASPAR yes 113790495
chr19 52323645 52323655 HOXA13 JASPAR yes 70874636
chr19 52323645 52323655 HOXD13 JASPAR yes 70874637
chr19 52323645 52323655 HOXA13 JASPAR yes 113790496
chr19 52323645 52323655 HOXD13 JASPAR yes 113790497
chr19 52323649 52323660 FOXH1 JASPAR yes 70874638
chr19 52323649 52323660 FOXH1 JASPAR yes 113790498
chr19 52323663 52323674 DMRT3 JASPAR yes 70874639
chr19 52323663 52323674 DMRT3 JASPAR yes 113790499
SNP sites on vista29904[chr19:52323338-52323678]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29904[chr19:52323338-52323678]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 3909
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 84025
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 31941
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 75078
chr19 52359055 52394203 - ZNF577 ENSG00000161551.8 52394203 0.81 1.0 17937 29475
chr19 52392477 52408293 - ZNF649 ENSG00000198093.6 52408293 0.78 0.99 17938 15385
Expression level of Genes
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miRNAs possibly regulated by vista29904[chr19:52323338-52323678]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results