EnhancerDB
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  3. vista29906[chr19:52325587-52325991]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29906[chr19:52325587-52325991]
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Tissue distribution of vista29906
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Transcription factor that possibly regulate vista29906[chr19:52325587-52325991]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52325575 52325589 ONECUT3 JASPAR yes 70874748
chr19 52325575 52325589 ONECUT3 JASPAR yes 113790780
chr19 52325596 52325608 YY1 JASPAR yes 70874749
chr19 52325596 52325608 YY1 JASPAR yes 113790781
chr19 52325603 52325610 CEBPA TRANSFAC yes 70874750
chr19 52325603 52325610 CEBPA TRANSFAC yes 113790782
chr19 52325609 52325614 GATA2 JASPAR yes 70874751
chr19 52325609 52325614 GATA2 JASPAR yes 113790783
chr19 52325614 52325626 E2F8 JASPAR yes 70874752
chr19 52325614 52325626 E2F8 JASPAR yes 113790784
chr19 52325615 52325627 E2F8 JASPAR yes 70874753
chr19 52325615 52325627 E2F8 JASPAR yes 113790785
chr19 52325624 52325638 JUN JASPAR yes 70874754
chr19 52325624 52325638 JUN JASPAR yes 113790786
chr19 52325630 52325636 JUN TRANSFAC yes 70874755
chr19 52325630 52325636 JUN TRANSFAC yes 113790787
chr19 52325634 52325637 MYB TRANSFAC yes 70874756
chr19 52325634 52325637 MYB TRANSFAC yes 113790788
chr19 52325668 52325674 HiNF-A TRANSFAC yes 70874757
chr19 52325668 52325674 HiNF-A TRANSFAC yes 113790789
chr19 52325669 52325683 SPI1 JASPAR yes 70874758
chr19 52325669 52325683 SPI1 JASPAR yes 113790790
chr19 52325684 52325688 YY1 TRANSFAC yes 70874759
chr19 52325684 52325688 YY1 TRANSFAC yes 113790791
chr19 52325689 52325699 ZNF740 JASPAR yes 70874760
chr19 52325689 52325699 ZNF740 JASPAR yes 113790792
chr19 52325690 52325705 NR2C2 JASPAR yes 70874761
chr19 52325690 52325705 NR2C2 JASPAR yes 113790793
chr19 52325691 52325701 SP1 JASPAR yes 70874762
chr19 52325691 52325701 SP1 JASPAR yes 113790794
chr19 52325692 52325701 SP1 TRANSFAC yes 70874763
chr19 52325692 52325701 SP1 TRANSFAC yes 113790795
chr19 52325692 52325702 SP1 JASPAR yes 70874764
chr19 52325692 52325702 SP1 JASPAR yes 113790796
chr19 52325693 52325703 SP1 JASPAR yes 70874765
chr19 52325693 52325703 SP1 JASPAR yes 113790797
chr19 52325694 52325700 MAZ TRANSFAC yes 70874766
chr19 52325694 52325700 MAZ TRANSFAC yes 113790798
chr19 52325698 52325711 NFKB1 JASPAR yes 70874767
chr19 52325698 52325711 NFKB2 JASPAR yes 70874768
chr19 52325698 52325711 NFKB1 JASPAR yes 113790799
chr19 52325698 52325711 NFKB2 JASPAR yes 113790800
chr19 52325700 52325704 LFA1 TRANSFAC yes 70874769
chr19 52325700 52325704 LFA1 TRANSFAC yes 113790801
chr19 52325718 52325722 NFE TRANSFAC yes 70874770
chr19 52325718 52325722 NFE TRANSFAC yes 113790802
chr19 52325777 52325783 SOX10 JASPAR yes 70874771
chr19 52325777 52325783 SOX10 JASPAR yes 113790803
chr19 52325802 52325821 CTCF JASPAR yes 70874772
chr19 52325802 52325821 CTCF JASPAR yes 113790804
chr19 52325811 52325816 H4TF1 TRANSFAC yes 70874773
chr19 52325811 52325816 H4TF1 TRANSFAC yes 113790805
chr19 52325811 52325822 CEBPB JASPAR yes 70874774
chr19 52325811 52325822 CEBPB JASPAR yes 113790806
chr19 52325811 52325823 HLF JASPAR yes 70874775
chr19 52325811 52325823 HLF JASPAR yes 113790807
chr19 52325812 52325822 CEBPB JASPAR yes 70874776
chr19 52325812 52325822 CEBPD JASPAR yes 70874777
chr19 52325812 52325822 CEBPE JASPAR yes 70874778
chr19 52325812 52325822 CEBPB JASPAR yes 113790808
chr19 52325812 52325822 CEBPD JASPAR yes 113790809
chr19 52325812 52325822 CEBPE JASPAR yes 113790810
chr19 52325812 52325823 CEBPA JASPAR yes 70874779
chr19 52325812 52325823 CEBPA JASPAR yes 113790811
chr19 52325831 52325844 ATF4 JASPAR yes 70874780
chr19 52325831 52325844 ATF4 JASPAR yes 113790812
chr19 52325832 52325843 FOS JASPAR yes 70874781
chr19 52325832 52325843 FOSL1 JASPAR yes 70874782
chr19 52325832 52325843 FOS JASPAR yes 113790813
chr19 52325832 52325843 FOSL1 JASPAR yes 113790814
chr19 52325833 52325842 JDP2 JASPAR yes 70874783
chr19 52325833 52325842 JDP2 JASPAR yes 113790815
chr19 52325833 52325844 JUNB JASPAR yes 70874784
chr19 52325833 52325844 JUNB JASPAR yes 113790816
chr19 52325833 52325847 JUN JASPAR yes 70874785
chr19 52325833 52325847 JUN JASPAR yes 113790817
chr19 52325834 52325845 BATF JASPAR yes 70874786
chr19 52325834 52325845 BATF JASPAR yes 113790818
chr19 52325857 52325866 SOX9 JASPAR yes 70874787
chr19 52325857 52325866 SOX9 JASPAR yes 113790819
chr19 52325858 52325874 SOX8 JASPAR yes 70874788
chr19 52325858 52325874 SOX8 JASPAR yes 113790820
chr19 52325904 52325915 DMRT3 JASPAR yes 70874789
chr19 52325904 52325915 DMRT3 JASPAR yes 113790821
chr19 52325909 52325918 VENTX JASPAR yes 70874790
chr19 52325909 52325918 VENTX JASPAR yes 113790822
chr19 52325909 52325919 EN2 JASPAR yes 70874791
chr19 52325909 52325919 ESX1 JASPAR yes 70874792
chr19 52325909 52325919 GBX1 JASPAR yes 70874793
chr19 52325909 52325919 GBX2 JASPAR yes 70874794
chr19 52325909 52325919 GSX2 JASPAR yes 70874795
chr19 52325909 52325919 HESX1 JASPAR yes 70874796
chr19 52325909 52325919 HOXB2 JASPAR yes 70874797
chr19 52325909 52325919 HOXB3 JASPAR yes 70874798
chr19 52325909 52325919 MEOX2 JASPAR yes 70874799
chr19 52325909 52325919 MNX1 JASPAR yes 70874800
chr19 52325909 52325919 RAX JASPAR yes 70874801
chr19 52325909 52325919 EN2 JASPAR yes 113790823
chr19 52325909 52325919 ESX1 JASPAR yes 113790824
chr19 52325909 52325919 GBX1 JASPAR yes 113790825
chr19 52325909 52325919 GBX2 JASPAR yes 113790826
chr19 52325909 52325919 GSX2 JASPAR yes 113790827
chr19 52325909 52325919 HESX1 JASPAR yes 113790828
chr19 52325909 52325919 HOXB2 JASPAR yes 113790829
chr19 52325909 52325919 HOXB3 JASPAR yes 113790830
chr19 52325909 52325919 MEOX2 JASPAR yes 113790831
chr19 52325909 52325919 MNX1 JASPAR yes 113790832
chr19 52325909 52325919 RAX JASPAR yes 113790833
chr19 52325909 52325920 HOXA10 JASPAR yes 70874802
chr19 52325909 52325920 HOXA10 JASPAR yes 113790834
chr19 52325910 52325918 BARX1 JASPAR yes 70874803
chr19 52325910 52325918 BSX JASPAR yes 70874804
chr19 52325910 52325918 ISL2 JASPAR yes 70874805
chr19 52325910 52325918 LMX1B JASPAR yes 70874806
chr19 52325910 52325918 MSX1 JASPAR yes 70874807
chr19 52325910 52325918 MSX2 JASPAR yes 70874808
chr19 52325910 52325918 BARX1 JASPAR yes 113790835
chr19 52325910 52325918 BSX JASPAR yes 113790836
chr19 52325910 52325918 ISL2 JASPAR yes 113790837
chr19 52325910 52325918 LMX1B JASPAR yes 113790838
chr19 52325910 52325918 MSX1 JASPAR yes 113790839
chr19 52325910 52325918 MSX2 JASPAR yes 113790840
chr19 52325915 52325918 MYB TRANSFAC yes 70874809
chr19 52325915 52325918 MYB TRANSFAC yes 113790841
chr19 52325932 52325946 GATA2 JASPAR yes 70874810
chr19 52325932 52325946 GATA2 JASPAR yes 113790842
chr19 52325934 52325940 GATA1 TRANSFAC yes 70874811
chr19 52325934 52325940 GATA1 TRANSFAC yes 113790843
chr19 52325934 52325942 GATA5 JASPAR yes 70874812
chr19 52325934 52325942 GATA5 JASPAR yes 113790844
chr19 52325954 52325970 POU4F2 JASPAR yes 70874813
chr19 52325954 52325970 POU4F2 JASPAR yes 113790845
chr19 52325975 52325990 FOXP1 JASPAR yes 70874814
chr19 52325975 52325990 FOXP1 JASPAR yes 113790846
chr19 52325976 52325987 FOXP2 JASPAR yes 70874815
chr19 52325976 52325987 FOXP2 JASPAR yes 113790847
chr19 52325982 52325987 GATA2 JASPAR yes 70874816
chr19 52325982 52325987 GATA2 JASPAR yes 113790848
SNP sites on vista29906[chr19:52325587-52325991]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29906[chr19:52325587-52325991]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52216365 52227247 - HAS1 ENSG00000105509.6 52227247 0.99 0.99 17933 1660
chr19 52248425 52307363 - FPR1 ENSG00000171051.4 52307363 0.97 0.99 17934 81776
chr19 52255279 52273779 + FPR2 ENSG00000171049.8 52255279 0.96 1.0 17935 29692
chr19 52298416 52329442 + FPR3 ENSG00000187474.4 52298416 0.88 0.95 17936 72829
chr19 52359055 52394203 - ZNF577 ENSG00000161551.8 52394203 0.81 1.0 17937 31788
chr19 52392477 52408293 - ZNF649 ENSG00000198093.6 52408293 0.78 0.99 17938 17698
Expression level of Genes
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miRNAs possibly regulated by vista29906[chr19:52325587-52325991]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results