EnhancerDB
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  3. vista29912[chr19:52697339-52697517]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29912[chr19:52697339-52697517]
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Tissue distribution of vista29912
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Transcription factor that possibly regulate vista29912[chr19:52697339-52697517]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 52697339 52697354 FOXP1 JASPAR yes 70875032
chr19 52697340 52697355 FOXP1 JASPAR yes 70875033
chr19 52697340 52697361 IRF1 JASPAR yes 70875034
chr19 52697341 52697356 FOXP1 JASPAR yes 70875035
chr19 52697341 52697362 IRF1 JASPAR yes 70875036
chr19 52697342 52697357 FOXP1 JASPAR yes 70875037
chr19 52697342 52697363 IRF1 JASPAR yes 70875038
chr19 52697343 52697358 FOXP1 JASPAR yes 70875039
chr19 52697343 52697364 IRF1 JASPAR yes 70875040
chr19 52697344 52697359 FOXP1 JASPAR yes 70875041
chr19 52697344 52697365 IRF1 JASPAR yes 70875042
chr19 52697345 52697360 FOXP1 JASPAR yes 70875043
chr19 52697345 52697366 IRF1 JASPAR yes 70875044
chr19 52697346 52697361 FOXP1 JASPAR yes 70875045
chr19 52697346 52697367 IRF1 JASPAR yes 70875046
chr19 52697347 52697362 FOXP1 JASPAR yes 70875047
chr19 52697347 52697368 IRF1 JASPAR yes 70875048
chr19 52697348 52697363 FOXP1 JASPAR yes 70875049
chr19 52697348 52697369 IRF1 JASPAR yes 70875050
chr19 52697349 52697364 FOXP1 JASPAR yes 70875051
chr19 52697349 52697370 IRF1 JASPAR yes 70875052
chr19 52697350 52697365 FOXP1 JASPAR yes 70875053
chr19 52697350 52697371 IRF1 JASPAR yes 70875054
chr19 52697351 52697366 FOXP1 JASPAR yes 70875055
chr19 52697353 52697368 FOXP1 JASPAR yes 70875056
chr19 52697353 52697374 IRF1 JASPAR yes 70875057
chr19 52697397 52697409 NHLH1 JASPAR yes 70875058
chr19 52697398 52697408 ID4 JASPAR yes 70875059
chr19 52697398 52697408 TCF3 JASPAR yes 70875060
chr19 52697398 52697408 TCF4 JASPAR yes 70875061
chr19 52697400 52697405 USF2 TRANSFAC yes 70875062
chr19 52697412 52697418 LEF1 TRANSFAC yes 70875063
chr19 52697412 52697418 SOX10 JASPAR yes 70875064
chr19 52697419 52697425 GATA3 JASPAR yes 70875065
chr19 52697446 52697456 ETV6 JASPAR yes 70875066
chr19 52697446 52697457 FLI1 JASPAR yes 70875067
chr19 52697447 52697455 EHF JASPAR yes 70875068
chr19 52697448 52697455 SPI1 JASPAR yes 70875069
chr19 52697496 52697517 ZNF263 JASPAR yes 70875070
chr19 52697503 52697512 THAP1 JASPAR yes 70875071
chr19 52697506 52697510 LFA1 TRANSFAC yes 70875072
SNP sites on vista29912[chr19:52697339-52697517]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29912[chr19:52697339-52697517]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 52534632 52598991 - ZNF432 ENSG00000256087.2 52598991 0.76 0.8 17943 1652
chr19 52567719 52599018 - ZNF841 ENSG00000197608.7 52599018 0.7 0.7 17944 1679
chr19 52616344 52643175 - ZNF616 ENSG00000204611.2 52643175 0.76 0.99 17945 45836
chr19 52657117 52674896 - ZNF836 ENSG00000196267.8 52674896 0.77 0.77 17946 77557
chr19 52693292 52730687 + PPP2R1A ENSG00000105568.13 52693292 0.72 1.0 17947 95953
chr19 52772824 52795977 + ZNF766 ENSG00000196214.6 52772824 0.59 0.99 17948 24693
Expression level of Genes
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miRNAs possibly regulated by vista29912[chr19:52697339-52697517]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results