EnhancerDB
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  3. vista29917[chr19:53132219-53132465]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29917[chr19:53132219-53132465]
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Tissue distribution of vista29917
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Transcription factor that possibly regulate vista29917[chr19:53132219-53132465]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 53132215 53132227 ZBTB7B JASPAR yes 70875181
chr19 53132215 53132227 ZBTB7B JASPAR yes 113800892
chr19 53132253 53132273 TP53 JASPAR yes 70875182
chr19 53132253 53132273 TP53 JASPAR yes 113800893
chr19 53132255 53132276 ZNF263 JASPAR yes 70875183
chr19 53132255 53132276 ZNF263 JASPAR yes 113800894
chr19 53132287 53132308 ZNF263 JASPAR yes 70875184
chr19 53132287 53132308 ZNF263 JASPAR yes 113800895
chr19 53132290 53132311 ZNF263 JASPAR yes 70875185
chr19 53132290 53132311 ZNF263 JASPAR yes 113800896
chr19 53132293 53132314 ZNF263 JASPAR yes 70875186
chr19 53132293 53132314 ZNF263 JASPAR yes 113800897
chr19 53132294 53132315 ZNF263 JASPAR yes 70875187
chr19 53132294 53132315 ZNF263 JASPAR yes 113800898
chr19 53132296 53132317 ZNF263 JASPAR yes 70875188
chr19 53132296 53132317 ZNF263 JASPAR yes 113800899
chr19 53132305 53132320 PRDM1 JASPAR yes 70875189
chr19 53132305 53132320 PRDM1 JASPAR yes 113800900
chr19 53132312 53132323 FLI1 JASPAR yes 70875190
chr19 53132312 53132323 FLI1 JASPAR yes 113800901
chr19 53132346 53132360 RXRB JASPAR yes 70875191
chr19 53132346 53132360 RXRG JASPAR yes 70875192
chr19 53132346 53132360 RXRB JASPAR yes 113800902
chr19 53132346 53132360 RXRG JASPAR yes 113800903
chr19 53132346 53132361 NR2C2 JASPAR yes 70875193
chr19 53132346 53132361 NR2C2 JASPAR yes 113800904
chr19 53132351 53132360 ZEB1 JASPAR yes 70875194
chr19 53132351 53132360 ZEB1 JASPAR yes 113800905
chr19 53132352 53132362 SREBF1 JASPAR yes 70875195
chr19 53132352 53132362 SREBF2 JASPAR yes 70875196
chr19 53132352 53132362 SREBF1 JASPAR yes 113800906
chr19 53132352 53132362 SREBF2 JASPAR yes 113800907
chr19 53132352 53132363 USF1 JASPAR yes 70875197
chr19 53132352 53132363 USF1 JASPAR yes 113800908
chr19 53132354 53132359 USF2 TRANSFAC yes 70875198
chr19 53132354 53132359 USF2 TRANSFAC yes 113800909
chr19 53132357 53132371 RORA JASPAR yes 70875199
chr19 53132357 53132371 RORA JASPAR yes 113800910
chr19 53132358 53132368 RORA JASPAR yes 70875200
chr19 53132358 53132368 RORA JASPAR yes 113800911
chr19 53132379 53132383 YY1 TRANSFAC yes 70875201
chr19 53132379 53132383 YY1 TRANSFAC yes 113800912
chr19 53132406 53132410 H1TF2 TRANSFAC yes 70875202
chr19 53132406 53132410 NFE TRANSFAC yes 70875203
chr19 53132406 53132410 SRF TRANSFAC yes 70875204
chr19 53132406 53132410 H1TF2 TRANSFAC yes 113800913
chr19 53132406 53132410 NFE TRANSFAC yes 113800914
chr19 53132406 53132410 SRF TRANSFAC yes 113800915
chr19 53132440 53132458 NR3C1 JASPAR yes 70875205
chr19 53132440 53132458 NR3C1 JASPAR yes 113800916
chr19 53132445 53132466 IRF1 JASPAR yes 70875206
chr19 53132445 53132466 IRF1 JASPAR yes 113800917
chr19 53132447 53132462 PRDM1 JASPAR yes 70875207
chr19 53132447 53132462 STAT2 JASPAR yes 70875208
chr19 53132447 53132462 PRDM1 JASPAR yes 113800918
chr19 53132447 53132462 STAT2 JASPAR yes 113800919
chr19 53132448 53132462 STAT1 JASPAR yes 70875209
chr19 53132448 53132462 STAT1 JASPAR yes 113800920
chr19 53132449 53132461 IRF1 JASPAR yes 70875210
chr19 53132449 53132461 IRF1 JASPAR yes 113800921
chr19 53132457 53132467 NFATC3 JASPAR yes 70875211
chr19 53132457 53132467 NFATC3 JASPAR yes 113800922
chr19 53132458 53132465 NFATC2 JASPAR yes 70875212
chr19 53132458 53132465 NFATC2 JASPAR yes 113800923
SNP sites on vista29917[chr19:53132219-53132465]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29917[chr19:53132219-53132465]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 53059075 53090427 + ZNF701 ENSG00000167562.7 53059075 0.72 0.99 17956 26856
chr19 53097313 53193749 - ZNF83 ENSG00000167766.14 53193749 0.76 0.99 17957 38716
Expression level of Genes
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miRNAs possibly regulated by vista29917[chr19:53132219-53132465]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results