EnhancerDB
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  3. vista29922[chr19:53239075-53239317]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29922[chr19:53239075-53239317]
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Tissue distribution of vista29922
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Transcription factor that possibly regulate vista29922[chr19:53239075-53239317]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 53239081 53239085 H4TF2 TRANSFAC yes 70875374
chr19 53239088 53239103 AR JASPAR yes 70875375
chr19 53239094 53239100 GATA3 JASPAR yes 70875376
chr19 53239100 53239121 IRF1 JASPAR yes 70875377
chr19 53239101 53239106 GATA2 JASPAR yes 70875378
chr19 53239102 53239117 PRDM1 JASPAR yes 70875379
chr19 53239128 53239138 ELK1 JASPAR yes 70875380
chr19 53239128 53239140 ELF4 JASPAR yes 70875381
chr19 53239132 53239138 ETS1 JASPAR yes 70875382
chr19 53239132 53239138 SPI1 JASPAR yes 70875383
chr19 53239144 53239149 SP1 TRANSFAC yes 70875384
chr19 53239166 53239181 STAT1 JASPAR yes 70875385
chr19 53239167 53239182 TFAP2A JASPAR yes 70875386
chr19 53239168 53239179 STAT1 JASPAR yes 70875387
chr19 53239168 53239179 STAT3 JASPAR yes 70875388
chr19 53239169 53239184 TFAP2C JASPAR yes 70875389
chr19 53239184 53239196 TEAD1 JASPAR yes 70875390
chr19 53239186 53239196 TEAD4 JASPAR yes 70875391
chr19 53239187 53239195 TEAD3 JASPAR yes 70875392
chr19 53239218 53239233 JUND JASPAR yes 70875393
chr19 53239219 53239232 JUN JASPAR yes 70875394
chr19 53239220 53239234 ATF7 JASPAR yes 70875395
chr19 53239221 53239236 JUND JASPAR yes 70875396
chr19 53239223 53239231 CREB1 JASPAR yes 70875397
chr19 53239224 53239232 NR4A2 JASPAR yes 70875398
chr19 53239226 53239230 ESR1 TRANSFAC yes 70875399
chr19 53239226 53239245 CTCF JASPAR yes 70875400
chr19 53239229 53239243 ZIC1 JASPAR yes 70875401
chr19 53239229 53239244 ZIC3 JASPAR yes 70875402
chr19 53239229 53239244 ZIC4 JASPAR yes 70875403
chr19 53239230 53239240 FIGLA JASPAR yes 70875404
chr19 53239230 53239240 MSC JASPAR yes 70875405
chr19 53239230 53239240 TCF3 JASPAR yes 70875406
chr19 53239231 53239240 SNAI2 JASPAR yes 70875407
chr19 53239232 53239237 USF2 TRANSFAC yes 70875408
chr19 53239259 53239267 SP1 TRANSFAC yes 70875409
chr19 53239259 53239267 WT1 TRANSFAC yes 70875410
chr19 53239261 53239268 SP1 TRANSFAC yes 70875411
chr19 53239261 53239271 SP1 JASPAR yes 70875412
chr19 53239262 53239273 E2F1 JASPAR yes 70875413
chr19 53239263 53239268 SP1 TRANSFAC yes 70875414
chr19 53239263 53239274 E2F4 JASPAR yes 70875415
chr19 53239263 53239274 E2F6 JASPAR yes 70875416
chr19 53239264 53239269 SP1 TRANSFAC yes 70875417
chr19 53239277 53239281 H4TF2 TRANSFAC yes 70875418
chr19 53239289 53239300 FLI1 JASPAR yes 70875419
chr19 53239300 53239311 E2F4 JASPAR yes 70875420
chr19 53239300 53239311 E2F6 JASPAR yes 70875421
chr19 53239301 53239306 SP1 TRANSFAC yes 70875422
SNP sites on vista29922[chr19:53239075-53239317]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29922[chr19:53239075-53239317]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 53097313 53193749 - ZNF83 ENSG00000167766.14 53193749 0.76 0.99 17957 54674
chr19 53206066 53238326 - ZNF611 ENSG00000213020.4 53238326 0.82 0.99 17958 99251
chr19 53267448 53290044 - ZNF600 ENSG00000189190.7 53290044 0.62 1.0 17959 49273
Expression level of Genes
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miRNAs possibly regulated by vista29922[chr19:53239075-53239317]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results