EnhancerDB
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  3. vista29923[chr19:53425304-53425713]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29923[chr19:53425304-53425713]
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Tissue distribution of vista29923
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Transcription factor that possibly regulate vista29923[chr19:53425304-53425713]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 53425304 53425309 USF2 TRANSFAC yes 70875423
chr19 53425311 53425322 STAT1 JASPAR yes 70875424
chr19 53425311 53425322 STAT3 JASPAR yes 70875425
chr19 53425318 53425333 ZIC3 JASPAR yes 70875426
chr19 53425319 53425333 GLIS3 JASPAR yes 70875427
chr19 53425335 53425344 SNAI2 JASPAR yes 70875428
chr19 53425335 53425345 ID4 JASPAR yes 70875429
chr19 53425338 53425351 NFKB1 JASPAR yes 70875430
chr19 53425340 53425346 ZNF354C JASPAR yes 70875431
chr19 53425346 53425351 USF2 TRANSFAC yes 70875432
chr19 53425347 53425357 ETV3 JASPAR yes 70875433
chr19 53425379 53425391 YY1 JASPAR yes 70875434
chr19 53425383 53425394 CEBPB JASPAR yes 70875435
chr19 53425394 53425398 NFE TRANSFAC yes 70875436
chr19 53425400 53425415 MEF2C JASPAR yes 70875437
chr19 53425401 53425416 MEF2A JASPAR yes 70875438
chr19 53425402 53425414 MEF2A JASPAR yes 70875439
chr19 53425402 53425414 MEF2B JASPAR yes 70875440
chr19 53425402 53425414 MEF2D JASPAR yes 70875441
chr19 53425431 53425437 ZNF354C JASPAR yes 70875442
chr19 53425441 53425445 YY1 TRANSFAC yes 70875443
chr19 53425444 53425465 ZNF263 JASPAR yes 70875444
chr19 53425445 53425448 MYB TRANSFAC yes 70875445
chr19 53425445 53425462 RXRA JASPAR yes 70875446
chr19 53425448 53425461 SCRT2 JASPAR yes 70875447
chr19 53425465 53425471 MZF1 JASPAR yes 70875448
chr19 53425468 53425472 H1TF2 TRANSFAC yes 70875449
chr19 53425468 53425472 NFE TRANSFAC yes 70875450
chr19 53425468 53425472 SRF TRANSFAC yes 70875451
chr19 53425498 53425503 H4TF1 TRANSFAC yes 70875452
chr19 53425502 53425523 ZNF263 JASPAR yes 70875453
chr19 53425556 53425575 PAX5 JASPAR yes 70875454
chr19 53425562 53425576 PLAG1 JASPAR yes 70875455
chr19 53425576 53425589 SMAD2 JASPAR yes 70875456
chr19 53425591 53425596 H4TF1 TRANSFAC yes 70875457
chr19 53425596 53425606 ID4 JASPAR yes 70875458
chr19 53425604 53425618 ZIC1 JASPAR yes 70875459
chr19 53425604 53425619 ZIC3 JASPAR yes 70875460
chr19 53425604 53425619 ZIC4 JASPAR yes 70875461
chr19 53425658 53425662 NFE TRANSFAC yes 70875462
chr19 53425670 53425691 ZNF263 JASPAR yes 70875463
chr19 53425677 53425686 SP1 TRANSFAC yes 70875464
chr19 53425679 53425700 ZNF263 JASPAR yes 70875465
chr19 53425682 53425703 ZNF263 JASPAR yes 70875466
SNP sites on vista29923[chr19:53425304-53425713]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29923[chr19:53425304-53425713]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 53300662 53360853 - ZNF28 ENSG00000198538.6 53360853 0.73 1.0 17960 35549
chr19 53341261 53360902 - ZNF468 ENSG00000204604.5 53360902 0.75 0.99 17961 35598
chr19 53367043 53400946 - ZNF320 ENSG00000182986.8 53400946 0.92 1.0 17962 75642
chr19 53430388 53466164 - ZNF816 ENSG00000180257.8 53466164 0.77 0.99 17963 59549
chr19 53431728 53466076 - ZNF321P ENSG00000221874.4 53466076 0.92 0.93 17964 59637
chr19 53517174 53519375 + ERVV-1 ENSG00000269526.1 53517174 1.0 1.0 17965 8539
Expression level of Genes
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miRNAs possibly regulated by vista29923[chr19:53425304-53425713]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results