EnhancerDB
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  3. vista29933[chr19:54049099-54049989]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29933[chr19:54049099-54049989]
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Tissue distribution of vista29933
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Transcription factor that possibly regulate vista29933[chr19:54049099-54049989]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 54049099 54049102 MYB TRANSFAC yes 70875982
chr19 54049099 54049102 MYB TRANSFAC yes 113822805
chr19 54049103 54049108 ETS2 TRANSFAC yes 70875983
chr19 54049103 54049108 ETS2 TRANSFAC yes 113822806
chr19 54049130 54049141 E2F6 JASPAR yes 70875984
chr19 54049130 54049141 E2F6 JASPAR yes 113822807
chr19 54049136 54049150 JUN JASPAR yes 70875985
chr19 54049136 54049150 JUN JASPAR yes 113822808
chr19 54049139 54049150 FOSL2 JASPAR yes 70875986
chr19 54049139 54049150 JUNB JASPAR yes 70875987
chr19 54049139 54049150 FOSL2 JASPAR yes 113822809
chr19 54049139 54049150 JUNB JASPAR yes 113822810
chr19 54049141 54049148 JUN TRANSFAC yes 70875988
chr19 54049141 54049148 JUN TRANSFAC yes 113822811
chr19 54049146 54049149 MYB TRANSFAC yes 70875989
chr19 54049146 54049149 MYB TRANSFAC yes 113822812
chr19 54049161 54049175 MTF1 JASPAR yes 70875990
chr19 54049161 54049175 MTF1 JASPAR yes 113822813
chr19 54049172 54049182 BHLHE40 JASPAR yes 70875991
chr19 54049172 54049182 BHLHE41 JASPAR yes 70875992
chr19 54049172 54049182 CLOCK JASPAR yes 70875993
chr19 54049172 54049182 MAX JASPAR yes 70875994
chr19 54049172 54049182 MLXIPL JASPAR yes 70875995
chr19 54049172 54049182 MLX JASPAR yes 70875996
chr19 54049172 54049182 MNT JASPAR yes 70875997
chr19 54049172 54049182 SREBF2 JASPAR yes 70875998
chr19 54049172 54049182 TFE3 JASPAR yes 70875999
chr19 54049172 54049182 TFEB JASPAR yes 70876000
chr19 54049172 54049182 TFEC JASPAR yes 70876001
chr19 54049172 54049182 BHLHE40 JASPAR yes 113822814
chr19 54049172 54049182 BHLHE41 JASPAR yes 113822815
chr19 54049172 54049182 CLOCK JASPAR yes 113822816
chr19 54049172 54049182 MAX JASPAR yes 113822817
chr19 54049172 54049182 MLXIPL JASPAR yes 113822818
chr19 54049172 54049182 MLX JASPAR yes 113822819
chr19 54049172 54049182 MNT JASPAR yes 113822820
chr19 54049172 54049182 SREBF2 JASPAR yes 113822821
chr19 54049172 54049182 TFE3 JASPAR yes 113822822
chr19 54049172 54049182 TFEB JASPAR yes 113822823
chr19 54049172 54049182 TFEC JASPAR yes 113822824
chr19 54049173 54049183 MAX JASPAR yes 70876002
chr19 54049173 54049183 MAX JASPAR yes 113822825
chr19 54049174 54049179 MYC TRANSFAC yes 70876003
chr19 54049174 54049179 USF1 TRANSFAC yes 70876004
chr19 54049174 54049179 USF2 TRANSFAC yes 70876005
chr19 54049174 54049179 MYC TRANSFAC yes 113822826
chr19 54049174 54049179 USF1 TRANSFAC yes 113822827
chr19 54049174 54049179 USF2 TRANSFAC yes 113822828
chr19 54049207 54049213 MZF1 JASPAR yes 70876006
chr19 54049207 54049213 MZF1 JASPAR yes 113822829
chr19 54049228 54049243 SOX21 JASPAR yes 70876007
chr19 54049228 54049243 SOX21 JASPAR yes 113822830
chr19 54049246 54049264 NFYA JASPAR yes 70876008
chr19 54049246 54049264 NFYA JASPAR yes 113822831
chr19 54049249 54049265 NFYA JASPAR yes 70876009
chr19 54049249 54049265 NFYA JASPAR yes 113822832
chr19 54049254 54049259 NFY TRANSFAC yes 70876010
chr19 54049254 54049259 NFY TRANSFAC yes 113822833
chr19 54049261 54049276 RUNX2 JASPAR yes 70876011
chr19 54049261 54049276 RUNX2 JASPAR yes 113822834
chr19 54049269 54049284 RFX5 JASPAR yes 70876012
chr19 54049269 54049284 TFAP2A JASPAR yes 70876013
chr19 54049269 54049284 TFAP2C JASPAR yes 70876014
chr19 54049269 54049284 RFX5 JASPAR yes 113822835
chr19 54049269 54049284 TFAP2A JASPAR yes 113822836
chr19 54049269 54049284 TFAP2C JASPAR yes 113822837
chr19 54049274 54049279 TFAP2A TRANSFAC yes 70876015
chr19 54049274 54049279 TFAP2A TRANSFAC yes 113822838
chr19 54049274 54049280 MZF1 JASPAR yes 70876016
chr19 54049274 54049280 MZF1 JASPAR yes 113822839
chr19 54049286 54049299 TFAP2A JASPAR yes 70876017
chr19 54049286 54049299 TFAP2B JASPAR yes 70876018
chr19 54049286 54049299 TFAP2C JASPAR yes 70876019
chr19 54049286 54049299 TFAP2A JASPAR yes 113822840
chr19 54049286 54049299 TFAP2B JASPAR yes 113822841
chr19 54049286 54049299 TFAP2C JASPAR yes 113822842
chr19 54049286 54049301 TFAP2C JASPAR yes 70876020
chr19 54049286 54049301 TFAP2C JASPAR yes 113822843
chr19 54049287 54049298 EBF1 JASPAR yes 70876021
chr19 54049287 54049298 EBF1 JASPAR yes 113822844
chr19 54049298 54049302 YY1 TRANSFAC yes 70876022
chr19 54049298 54049302 YY1 TRANSFAC yes 113822845
chr19 54049337 54049358 ZNF263 JASPAR yes 70876023
chr19 54049337 54049358 ZNF263 JASPAR yes 113822846
chr19 54049346 54049351 ETS2 TRANSFAC yes 70876024
chr19 54049346 54049351 ETS2 TRANSFAC yes 113822847
chr19 54049350 54049360 MZF1 JASPAR yes 70876025
chr19 54049350 54049360 MZF1 JASPAR yes 113822848
chr19 54049386 54049396 MZF1 JASPAR yes 70876026
chr19 54049386 54049396 MZF1 JASPAR yes 113822849
chr19 54049388 54049409 IRF1 JASPAR yes 70876027
chr19 54049388 54049409 IRF1 JASPAR yes 113822850
chr19 54049389 54049410 ZNF263 JASPAR yes 70876028
chr19 54049389 54049410 ZNF263 JASPAR yes 113822851
chr19 54049392 54049407 FOXP1 JASPAR yes 70876029
chr19 54049392 54049407 FOXP1 JASPAR yes 113822852
chr19 54049392 54049413 IRF1 JASPAR yes 70876030
chr19 54049392 54049413 IRF1 JASPAR yes 113822853
chr19 54049393 54049408 FOXP1 JASPAR yes 70876031
chr19 54049393 54049408 FOXP1 JASPAR yes 113822854
chr19 54049393 54049414 IRF1 JASPAR yes 70876032
chr19 54049393 54049414 IRF1 JASPAR yes 113822855
chr19 54049394 54049409 FOXP1 JASPAR yes 70876033
chr19 54049394 54049409 FOXP1 JASPAR yes 113822856
chr19 54049394 54049415 IRF1 JASPAR yes 70876034
chr19 54049394 54049415 IRF1 JASPAR yes 113822857
chr19 54049395 54049410 FOXP1 JASPAR yes 70876035
chr19 54049395 54049410 FOXP1 JASPAR yes 113822858
chr19 54049395 54049416 IRF1 JASPAR yes 70876036
chr19 54049395 54049416 IRF1 JASPAR yes 113822859
chr19 54049396 54049411 FOXP1 JASPAR yes 70876037
chr19 54049396 54049411 FOXP1 JASPAR yes 113822860
chr19 54049396 54049417 IRF1 JASPAR yes 70876038
chr19 54049396 54049417 IRF1 JASPAR yes 113822861
chr19 54049397 54049412 FOXP1 JASPAR yes 70876039
chr19 54049397 54049412 FOXP1 JASPAR yes 113822862
chr19 54049397 54049418 IRF1 JASPAR yes 70876040
chr19 54049397 54049418 IRF1 JASPAR yes 113822863
chr19 54049398 54049413 FOXP1 JASPAR yes 70876041
chr19 54049398 54049413 FOXP1 JASPAR yes 113822864
chr19 54049399 54049414 FOXP1 JASPAR yes 70876042
chr19 54049399 54049414 FOXP1 JASPAR yes 113822865
chr19 54049399 54049420 IRF1 JASPAR yes 70876043
chr19 54049399 54049420 IRF1 JASPAR yes 113822866
chr19 54049400 54049415 FOXP1 JASPAR yes 70876044
chr19 54049400 54049415 FOXP1 JASPAR yes 113822867
chr19 54049400 54049421 IRF1 JASPAR yes 70876045
chr19 54049400 54049421 IRF1 JASPAR yes 113822868
chr19 54049401 54049416 FOXP1 JASPAR yes 70876046
chr19 54049401 54049416 FOXP1 JASPAR yes 113822869
chr19 54049419 54049423 YY1 TRANSFAC yes 70876047
chr19 54049419 54049423 YY1 TRANSFAC yes 113822870
chr19 54049438 54049446 DLX6 JASPAR yes 70876048
chr19 54049438 54049446 MSX1 JASPAR yes 70876049
chr19 54049438 54049446 DLX6 JASPAR yes 113822871
chr19 54049438 54049446 MSX1 JASPAR yes 113822872
chr19 54049440 54049451 RUNX1 JASPAR yes 70876050
chr19 54049440 54049451 RUNX1 JASPAR yes 113822873
chr19 54049441 54049451 RUNX3 JASPAR yes 70876051
chr19 54049441 54049451 RUNX3 JASPAR yes 113822874
chr19 54049442 54049451 RUNX2 JASPAR yes 70876052
chr19 54049442 54049451 RUNX2 JASPAR yes 113822875
chr19 54049455 54049459 YY1 TRANSFAC yes 70876053
chr19 54049455 54049459 YY1 TRANSFAC yes 113822876
chr19 54049458 54049466 FOXL1 JASPAR yes 70876054
chr19 54049458 54049466 FOXL1 JASPAR yes 113822877
chr19 54049484 54049498 RORA JASPAR yes 70876055
chr19 54049484 54049498 RORA JASPAR yes 113822878
chr19 54049485 54049495 RORA JASPAR yes 70876056
chr19 54049485 54049495 RORA JASPAR yes 113822879
chr19 54049523 54049538 STAT2 JASPAR yes 70876057
chr19 54049523 54049538 STAT2 JASPAR yes 113822880
chr19 54049527 54049545 SRF JASPAR yes 70876058
chr19 54049527 54049545 SRF JASPAR yes 113822881
chr19 54049534 54049540 TCF4 TRANSFAC yes 70876059
chr19 54049534 54049540 TCF4 TRANSFAC yes 113822882
chr19 54049541 54049545 YY1 TRANSFAC yes 70876060
chr19 54049541 54049545 YY1 TRANSFAC yes 113822883
chr19 54049542 54049552 BARHL2 JASPAR yes 70876061
chr19 54049542 54049552 BARHL2 JASPAR yes 113822884
chr19 54049552 54049564 FOXI1 JASPAR yes 70876062
chr19 54049552 54049564 FOXI1 JASPAR yes 113822885
chr19 54049552 54049567 FOXP1 JASPAR yes 70876063
chr19 54049552 54049567 FOXP1 JASPAR yes 113822886
chr19 54049553 54049564 FOXP2 JASPAR yes 70876064
chr19 54049553 54049564 FOXP2 JASPAR yes 113822887
chr19 54049554 54049562 FOXG1 JASPAR yes 70876065
chr19 54049554 54049562 FOXG1 JASPAR yes 113822888
chr19 54049581 54049592 HOXA10 JASPAR yes 70876066
chr19 54049581 54049592 HOXA10 JASPAR yes 113822889
chr19 54049582 54049591 CDX1 JASPAR yes 70876067
chr19 54049582 54049591 CDX1 JASPAR yes 113822890
chr19 54049582 54049593 CDX2 JASPAR yes 70876068
chr19 54049582 54049593 CDX2 JASPAR yes 113822891
chr19 54049597 54049602 GATA2 JASPAR yes 70876069
chr19 54049597 54049602 GATA2 JASPAR yes 113822892
chr19 54049617 54049622 GATA2 JASPAR yes 70876070
chr19 54049617 54049622 GATA2 JASPAR yes 113822893
chr19 54049622 54049630 HOXA5 JASPAR yes 70876071
chr19 54049622 54049630 HOXA5 JASPAR yes 113822894
chr19 54049630 54049644 EBF1 JASPAR yes 70876072
chr19 54049630 54049644 EBF1 JASPAR yes 113822895
chr19 54049631 54049642 EBF1 JASPAR yes 70876073
chr19 54049631 54049642 EBF1 JASPAR yes 113822896
chr19 54049632 54049638 MZF1 JASPAR yes 70876074
chr19 54049632 54049638 MZF1 JASPAR yes 113822897
chr19 54049633 54049644 EBF1 JASPAR yes 70876075
chr19 54049633 54049644 EBF1 JASPAR yes 113822898
chr19 54049637 54049651 CREB3L1 JASPAR yes 70876076
chr19 54049637 54049651 CREB3L1 JASPAR yes 113822899
chr19 54049667 54049674 SPIB JASPAR yes 70876077
chr19 54049667 54049674 SPIB JASPAR yes 113822900
chr19 54049674 54049693 CTCF JASPAR yes 70876078
chr19 54049674 54049693 CTCF JASPAR yes 113822901
chr19 54049680 54049692 HNF1B JASPAR yes 70876079
chr19 54049680 54049692 HNF1B JASPAR yes 113822902
chr19 54049709 54049714 GATA2 JASPAR yes 70876080
chr19 54049709 54049714 GATA2 JASPAR yes 113822903
chr19 54049710 54049716 ZNF354C JASPAR yes 70876081
chr19 54049710 54049716 ZNF354C JASPAR yes 113822904
chr19 54049721 54049725 YY1 TRANSFAC yes 70876082
chr19 54049721 54049725 YY1 TRANSFAC yes 113822905
chr19 54049732 54049740 FOXO3 JASPAR yes 70876083
chr19 54049732 54049740 FOXO3 JASPAR yes 113822906
chr19 54049737 54049748 SPDEF JASPAR yes 70876084
chr19 54049737 54049748 SPDEF JASPAR yes 113822907
chr19 54049737 54049751 ZIC1 JASPAR yes 70876085
chr19 54049737 54049751 ZIC1 JASPAR yes 113822908
chr19 54049737 54049752 ZIC3 JASPAR yes 70876086
chr19 54049737 54049752 ZIC4 JASPAR yes 70876087
chr19 54049737 54049752 ZIC3 JASPAR yes 113822909
chr19 54049737 54049752 ZIC4 JASPAR yes 113822910
chr19 54049739 54049752 ZBTB18 JASPAR yes 70876088
chr19 54049739 54049752 ZBTB18 JASPAR yes 113822911
chr19 54049747 54049758 FOXA1 JASPAR yes 70876089
chr19 54049747 54049758 FOXA1 JASPAR yes 113822912
chr19 54049780 54049791 NFKB1 JASPAR yes 70876090
chr19 54049780 54049791 NFKB1 JASPAR yes 113822913
chr19 54049787 54049797 MZF1 JASPAR yes 70876091
chr19 54049787 54049797 MZF1 JASPAR yes 113822914
chr19 54049792 54049807 FOXP1 JASPAR yes 70876092
chr19 54049792 54049807 FOXP1 JASPAR yes 113822915
chr19 54049793 54049808 FOXP1 JASPAR yes 70876093
chr19 54049793 54049808 FOXP1 JASPAR yes 113822916
chr19 54049794 54049800 TBP TRANSFAC yes 70876094
chr19 54049794 54049800 TBP TRANSFAC yes 113822917
chr19 54049794 54049809 FOXP1 JASPAR yes 70876095
chr19 54049794 54049809 FOXP1 JASPAR yes 113822918
chr19 54049794 54049815 IRF1 JASPAR yes 70876096
chr19 54049794 54049815 IRF1 JASPAR yes 113822919
chr19 54049795 54049810 FOXP1 JASPAR yes 70876097
chr19 54049795 54049810 FOXP1 JASPAR yes 113822920
chr19 54049797 54049812 FOXP1 JASPAR yes 70876098
chr19 54049797 54049812 FOXP1 JASPAR yes 113822921
chr19 54049799 54049814 FOXP1 JASPAR yes 70876099
chr19 54049799 54049814 FOXP1 JASPAR yes 113822922
chr19 54049830 54049848 E2F3 JASPAR yes 70876100
chr19 54049830 54049848 E2F3 JASPAR yes 113822923
chr19 54049843 54049847 YY1 TRANSFAC yes 70876101
chr19 54049843 54049847 YY1 TRANSFAC yes 113822924
chr19 54049893 54049899 HiNF-A TRANSFAC yes 70876102
chr19 54049893 54049899 HiNF-A TRANSFAC yes 113822925
chr19 54049901 54049916 LEF1 JASPAR yes 70876103
chr19 54049901 54049916 LEF1 JASPAR yes 113822926
chr19 54049909 54049930 REST JASPAR yes 70876104
chr19 54049909 54049930 REST JASPAR yes 113822927
chr19 54049913 54049920 NFATC2 JASPAR yes 70876105
chr19 54049913 54049920 NFATC2 JASPAR yes 113822928
chr19 54049913 54049927 EBF1 JASPAR yes 70876106
chr19 54049913 54049927 EBF1 JASPAR yes 113822929
chr19 54049938 54049953 FOXP1 JASPAR yes 70876107
chr19 54049938 54049953 FOXP1 JASPAR yes 113822930
chr19 54049939 54049960 IRF1 JASPAR yes 70876108
chr19 54049939 54049960 IRF1 JASPAR yes 113822931
chr19 54049941 54049956 IRF9 JASPAR yes 70876109
chr19 54049941 54049956 IRF9 JASPAR yes 113822932
chr19 54049943 54049957 SPIC JASPAR yes 70876110
chr19 54049943 54049957 STAT1 JASPAR yes 70876111
chr19 54049943 54049957 SPIC JASPAR yes 113822933
chr19 54049943 54049957 STAT1 JASPAR yes 113822934
chr19 54049943 54049958 PRDM1 JASPAR yes 70876112
chr19 54049943 54049958 STAT2 JASPAR yes 70876113
chr19 54049943 54049958 PRDM1 JASPAR yes 113822935
chr19 54049943 54049958 STAT2 JASPAR yes 113822936
chr19 54049943 54049961 IRF2 JASPAR yes 70876114
chr19 54049943 54049961 IRF2 JASPAR yes 113822937
chr19 54049958 54049973 FOXP1 JASPAR yes 70876115
chr19 54049958 54049973 FOXP1 JASPAR yes 113822938
chr19 54049983 54049995 IRF1 JASPAR yes 70876116
chr19 54049983 54049995 IRF1 JASPAR yes 113822939
SNP sites on vista29933[chr19:54049099-54049989]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29933[chr19:54049099-54049989]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 53970989 54006950 + ZNF813 ENSG00000198346.6 53970989 0.74 0.91 17978 21890
chr19 54024235 54083523 + ZNF331 ENSG00000130844.12 54024235 0.86 0.81 17979 75136
chr19 54102882 54106751 - CTB-167G5.5 ENSG00000268864.1 54106751 0.94 0.96 17980 43238
chr19 54135310 54140263 + DPRX ENSG00000204595.1 54135310 0.92 0.94 17981 14679
Expression level of Genes
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miRNAs possibly regulated by vista29933[chr19:54049099-54049989]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results