EnhancerDB
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  3. vista29938[chr19:54145720-54146081]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista29938[chr19:54145720-54146081]
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Tissue distribution of vista29938
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Transcription factor that possibly regulate vista29938[chr19:54145720-54146081]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 54145708 54145722 PAX6 JASPAR yes 70876410
chr19 54145708 54145722 PAX6 JASPAR yes 113829622
chr19 54145736 54145741 SP1 TRANSFAC yes 70876411
chr19 54145736 54145741 SP1 TRANSFAC yes 113829623
chr19 54145739 54145754 HNF4G JASPAR yes 70876412
chr19 54145739 54145754 NR2C2 JASPAR yes 70876413
chr19 54145739 54145754 HNF4G JASPAR yes 113829624
chr19 54145739 54145754 NR2C2 JASPAR yes 113829625
chr19 54145740 54145754 NR2F1 JASPAR yes 70876414
chr19 54145740 54145754 RXRG JASPAR yes 70876415
chr19 54145740 54145754 NR2F1 JASPAR yes 113829626
chr19 54145740 54145754 RXRG JASPAR yes 113829627
chr19 54145740 54145755 HNF4A JASPAR yes 70876416
chr19 54145740 54145755 HNF4A JASPAR yes 113829628
chr19 54145744 54145756 HNF1B JASPAR yes 70876417
chr19 54145744 54145756 HNF1B JASPAR yes 113829629
chr19 54145750 54145761 ESRRB JASPAR yes 70876418
chr19 54145750 54145761 ESRRB JASPAR yes 113829630
chr19 54145752 54145755 MYB TRANSFAC yes 70876419
chr19 54145752 54145755 MYB TRANSFAC yes 113829631
chr19 54145757 54145767 RORA JASPAR yes 70876420
chr19 54145757 54145767 RORA JASPAR yes 113829632
chr19 54145758 54145769 ESRRA JASPAR yes 70876421
chr19 54145758 54145769 ESRRA JASPAR yes 113829633
chr19 54145758 54145776 MAFF JASPAR yes 70876422
chr19 54145758 54145776 MAFF JASPAR yes 113829634
chr19 54145759 54145774 MAFK JASPAR yes 70876423
chr19 54145759 54145774 MAFK JASPAR yes 113829635
chr19 54145761 54145778 RXRA JASPAR yes 70876424
chr19 54145761 54145778 RXRA JASPAR yes 113829636
chr19 54145762 54145766 ESR1 TRANSFAC yes 70876425
chr19 54145762 54145766 ESR1 TRANSFAC yes 113829637
chr19 54145763 54145774 NRL JASPAR yes 70876426
chr19 54145763 54145774 NRL JASPAR yes 113829638
chr19 54145771 54145775 YY1 TRANSFAC yes 70876427
chr19 54145771 54145775 YY1 TRANSFAC yes 113829639
chr19 54145776 54145786 NFATC3 JASPAR yes 70876428
chr19 54145776 54145786 NFATC3 JASPAR yes 113829640
chr19 54145790 54145801 FOXA1 JASPAR yes 70876429
chr19 54145790 54145801 FOXA1 JASPAR yes 113829641
chr19 54145790 54145805 FOXA1 JASPAR yes 70876430
chr19 54145790 54145805 FOXA1 JASPAR yes 113829642
chr19 54145791 54145802 FOXB1 JASPAR yes 70876431
chr19 54145791 54145802 FOXC1 JASPAR yes 70876432
chr19 54145791 54145802 FOXB1 JASPAR yes 113829643
chr19 54145791 54145802 FOXC1 JASPAR yes 113829644
chr19 54145791 54145803 FOXC2 JASPAR yes 70876433
chr19 54145791 54145803 FOXC2 JASPAR yes 113829645
chr19 54145799 54145803 YY1 TRANSFAC yes 70876434
chr19 54145799 54145803 YY1 TRANSFAC yes 113829646
chr19 54145888 54145894 ESR1 TRANSFAC yes 70876435
chr19 54145888 54145894 ESR1 TRANSFAC yes 113829647
chr19 54145890 54145894 ESR1 TRANSFAC yes 70876436
chr19 54145890 54145894 ESR1 TRANSFAC yes 113829648
chr19 54145898 54145910 ZBTB7A JASPAR yes 70876437
chr19 54145898 54145910 ZBTB7A JASPAR yes 113829649
chr19 54145903 54145908 SP1 TRANSFAC yes 70876438
chr19 54145903 54145908 SP1 TRANSFAC yes 113829650
chr19 54145906 54145918 INSM1 JASPAR yes 70876439
chr19 54145906 54145918 INSM1 JASPAR yes 113829651
chr19 54145988 54146009 IRF1 JASPAR yes 70876440
chr19 54145988 54146009 IRF1 JASPAR yes 113829652
chr19 54145990 54146005 PRDM1 JASPAR yes 70876441
chr19 54145990 54146005 PRDM1 JASPAR yes 113829653
chr19 54145994 54146015 IRF1 JASPAR yes 70876442
chr19 54145994 54146015 IRF1 JASPAR yes 113829654
chr19 54145995 54146016 ZNF263 JASPAR yes 70876443
chr19 54145995 54146016 ZNF263 JASPAR yes 113829655
chr19 54145996 54146011 STAT2 JASPAR yes 70876444
chr19 54145996 54146011 STAT2 JASPAR yes 113829656
chr19 54145997 54146011 STAT1 JASPAR yes 70876445
chr19 54145997 54146011 STAT1 JASPAR yes 113829657
chr19 54145998 54146019 ZNF263 JASPAR yes 70876446
chr19 54145998 54146019 ZNF263 JASPAR yes 113829658
chr19 54145999 54146014 FOXP1 JASPAR yes 70876447
chr19 54145999 54146014 FOXP1 JASPAR yes 113829659
chr19 54146001 54146022 ZNF263 JASPAR yes 70876448
chr19 54146001 54146022 ZNF263 JASPAR yes 113829660
chr19 54146003 54146024 IRF1 JASPAR yes 70876449
chr19 54146003 54146024 IRF1 JASPAR yes 113829661
chr19 54146004 54146025 ZNF263 JASPAR yes 70876450
chr19 54146004 54146025 ZNF263 JASPAR yes 113829662
chr19 54146005 54146020 PRDM1 JASPAR yes 70876451
chr19 54146005 54146020 STAT2 JASPAR yes 70876452
chr19 54146005 54146020 PRDM1 JASPAR yes 113829663
chr19 54146005 54146020 STAT2 JASPAR yes 113829664
chr19 54146006 54146020 SPIC JASPAR yes 70876453
chr19 54146006 54146020 STAT1 JASPAR yes 70876454
chr19 54146006 54146020 SPIC JASPAR yes 113829665
chr19 54146006 54146020 STAT1 JASPAR yes 113829666
chr19 54146009 54146030 ZNF263 JASPAR yes 70876455
chr19 54146009 54146030 ZNF263 JASPAR yes 113829667
chr19 54146013 54146034 ZNF263 JASPAR yes 70876456
chr19 54146013 54146034 ZNF263 JASPAR yes 113829668
chr19 54146016 54146037 IRF1 JASPAR yes 70876457
chr19 54146016 54146037 IRF1 JASPAR yes 113829669
chr19 54146017 54146038 ZNF263 JASPAR yes 70876458
chr19 54146017 54146038 ZNF263 JASPAR yes 113829670
chr19 54146018 54146033 STAT2 JASPAR yes 70876459
chr19 54146018 54146033 STAT2 JASPAR yes 113829671
chr19 54146019 54146033 STAT1 JASPAR yes 70876460
chr19 54146019 54146033 STAT1 JASPAR yes 113829672
chr19 54146020 54146041 ZNF263 JASPAR yes 70876461
chr19 54146020 54146041 ZNF263 JASPAR yes 113829673
chr19 54146021 54146042 IRF1 JASPAR yes 70876462
chr19 54146021 54146042 IRF1 JASPAR yes 113829674
chr19 54146023 54146028 ETS2 TRANSFAC yes 70876463
chr19 54146023 54146028 ETS2 TRANSFAC yes 113829675
chr19 54146023 54146038 PRDM1 JASPAR yes 70876464
chr19 54146023 54146038 PRDM1 JASPAR yes 113829676
chr19 54146025 54146046 IRF1 JASPAR yes 70876465
chr19 54146025 54146046 IRF1 JASPAR yes 113829677
chr19 54146027 54146048 IRF1 JASPAR yes 70876466
chr19 54146027 54146048 IRF1 JASPAR yes 113829678
chr19 54146028 54146042 SPIC JASPAR yes 70876467
chr19 54146028 54146042 SPIC JASPAR yes 113829679
chr19 54146031 54146045 IRF7 JASPAR yes 70876468
chr19 54146031 54146045 IRF7 JASPAR yes 113829680
chr19 54146033 54146054 IRF1 JASPAR yes 70876469
chr19 54146033 54146054 IRF1 JASPAR yes 113829681
chr19 54146035 54146050 STAT2 JASPAR yes 70876470
chr19 54146035 54146050 STAT2 JASPAR yes 113829682
chr19 54146036 54146040 YY1 TRANSFAC yes 70876471
chr19 54146036 54146040 YY1 TRANSFAC yes 113829683
chr19 54146036 54146050 STAT1 JASPAR yes 70876472
chr19 54146036 54146050 STAT1 JASPAR yes 113829684
chr19 54146037 54146049 IRF1 JASPAR yes 70876473
chr19 54146037 54146049 IRF1 JASPAR yes 113829685
chr19 54146038 54146059 IRF1 JASPAR yes 70876474
chr19 54146038 54146059 IRF1 JASPAR yes 113829686
chr19 54146042 54146063 IRF1 JASPAR yes 70876475
chr19 54146042 54146063 IRF1 JASPAR yes 113829687
chr19 54146043 54146064 ZNF263 JASPAR yes 70876476
chr19 54146043 54146064 ZNF263 JASPAR yes 113829688
chr19 54146046 54146067 ZNF263 JASPAR yes 70876477
chr19 54146046 54146067 ZNF263 JASPAR yes 113829689
chr19 54146047 54146068 ZNF263 JASPAR yes 70876478
chr19 54146047 54146068 ZNF263 JASPAR yes 113829690
chr19 54146055 54146076 ZNF263 JASPAR yes 70876479
chr19 54146055 54146076 ZNF263 JASPAR yes 113829691
chr19 54146057 54146062 ETS2 TRANSFAC yes 70876480
chr19 54146057 54146062 ETS2 TRANSFAC yes 113829692
chr19 54146058 54146079 IRF1 JASPAR yes 70876481
chr19 54146058 54146079 ZNF263 JASPAR yes 70876482
chr19 54146058 54146079 IRF1 JASPAR yes 113829693
chr19 54146058 54146079 ZNF263 JASPAR yes 113829694
chr19 54146059 54146074 FOXP1 JASPAR yes 70876483
chr19 54146059 54146074 FOXP1 JASPAR yes 113829695
chr19 54146059 54146080 IRF1 JASPAR yes 70876484
chr19 54146059 54146080 IRF1 JASPAR yes 113829696
chr19 54146063 54146084 IRF1 JASPAR yes 70876485
chr19 54146063 54146084 IRF1 JASPAR yes 113829697
chr19 54146064 54146079 FOXP1 JASPAR yes 70876486
chr19 54146064 54146079 FOXP1 JASPAR yes 113829698
chr19 54146065 54146080 PRDM1 JASPAR yes 70876487
chr19 54146065 54146080 STAT2 JASPAR yes 70876488
chr19 54146065 54146080 PRDM1 JASPAR yes 113829699
chr19 54146065 54146080 STAT2 JASPAR yes 113829700
chr19 54146069 54146090 IRF1 JASPAR yes 70876489
chr19 54146069 54146090 IRF1 JASPAR yes 113829701
chr19 54146075 54146096 IRF1 JASPAR yes 70876490
chr19 54146075 54146096 IRF1 JASPAR yes 113829702
chr19 54146078 54146082 NFE TRANSFAC yes 70876491
chr19 54146078 54146082 NFE TRANSFAC yes 113829703
SNP sites on vista29938[chr19:54145720-54146081]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista29938[chr19:54145720-54146081]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 54102882 54106751 - CTB-167G5.5 ENSG00000268864.1 54106751 0.94 0.96 17980 61031
chr19 54135310 54140263 + DPRX ENSG00000204595.1 54135310 0.92 0.94 17981 89590
Expression level of Genes
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miRNAs possibly regulated by vista29938[chr19:54145720-54146081]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results