EnhancerDB
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  3. vista3[chr1:845485-845678]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3[chr1:845485-845678]
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Tissue distribution of vista3
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Transcription factor that possibly regulate vista3[chr1:845485-845678]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 845485 845505 RREB1 JASPAR yes 26172001
chr1 845485 845505 RREB1 JASPAR yes 118213120
chr1 845486 845491 SP1 TRANSFAC yes 26172002
chr1 845486 845491 SP1 TRANSFAC yes 118213121
chr1 845486 845492 SP1 TRANSFAC yes 26172003
chr1 845486 845492 SP1 TRANSFAC yes 118213122
chr1 845487 845507 RREB1 JASPAR yes 26172004
chr1 845487 845507 RREB1 JASPAR yes 118213123
chr1 845488 845508 RREB1 JASPAR yes 26172005
chr1 845488 845508 RREB1 JASPAR yes 118213124
chr1 845488 845509 ZNF263 JASPAR yes 26172006
chr1 845488 845509 ZNF263 JASPAR yes 118213125
chr1 845489 845499 SP1 JASPAR yes 26172007
chr1 845489 845499 SP1 JASPAR yes 118213126
chr1 845490 845502 INSM1 JASPAR yes 26172008
chr1 845490 845502 INSM1 JASPAR yes 118213127
chr1 845490 845510 RREB1 JASPAR yes 26172009
chr1 845490 845510 RREB1 JASPAR yes 118213128
chr1 845491 845511 RREB1 JASPAR yes 26172010
chr1 845491 845511 RREB1 JASPAR yes 118213129
chr1 845492 845502 GCM2 JASPAR yes 26172011
chr1 845492 845502 GCM2 JASPAR yes 118213130
chr1 845493 845503 ZNF740 JASPAR yes 26172012
chr1 845493 845503 ZNF740 JASPAR yes 118213131
chr1 845494 845514 RREB1 JASPAR yes 26172013
chr1 845494 845514 RREB1 JASPAR yes 118213132
chr1 845495 845505 SP1 JASPAR yes 26172014
chr1 845495 845505 SP1 JASPAR yes 118213133
chr1 845495 845515 RREB1 JASPAR yes 26172015
chr1 845495 845515 RREB1 JASPAR yes 118213134
chr1 845496 845516 RREB1 JASPAR yes 26172016
chr1 845496 845516 RREB1 JASPAR yes 118213135
chr1 845498 845503 SP1 TRANSFAC yes 26172017
chr1 845498 845503 SP1 TRANSFAC yes 118213136
chr1 845498 845508 ZNF740 JASPAR yes 26172018
chr1 845498 845508 ZNF740 JASPAR yes 118213137
chr1 845498 845518 RREB1 JASPAR yes 26172019
chr1 845498 845518 RREB1 JASPAR yes 118213138
chr1 845499 845509 SP1 JASPAR yes 26172020
chr1 845499 845509 ZNF740 JASPAR yes 26172021
chr1 845499 845509 SP1 JASPAR yes 118213139
chr1 845499 845509 ZNF740 JASPAR yes 118213140
chr1 845499 845519 RREB1 JASPAR yes 26172022
chr1 845499 845519 RREB1 JASPAR yes 118213141
chr1 845510 845515 SP1 TRANSFAC yes 26172023
chr1 845510 845515 SP1 TRANSFAC yes 118213142
chr1 845510 845516 SP1 TRANSFAC yes 26172024
chr1 845510 845516 SP1 TRANSFAC yes 118213143
chr1 845511 845519 SP1 TRANSFAC yes 26172025
chr1 845511 845519 WT1 TRANSFAC yes 26172026
chr1 845511 845519 SP1 TRANSFAC yes 118213144
chr1 845511 845519 WT1 TRANSFAC yes 118213145
chr1 845511 845522 NRF1 JASPAR yes 26172027
chr1 845511 845522 NRF1 JASPAR yes 118213146
chr1 845536 845541 NFY TRANSFAC yes 26172028
chr1 845536 845541 NFY TRANSFAC yes 118213147
chr1 845544 845559 ZBTB33 JASPAR yes 26172029
chr1 845544 845559 ZBTB33 JASPAR yes 118213148
chr1 845558 845567 TFAP2A JASPAR yes 26172030
chr1 845558 845567 TFAP2A JASPAR yes 118213149
chr1 845563 845567 LFA1 TRANSFAC yes 26172031
chr1 845563 845567 LFA1 TRANSFAC yes 118213150
chr1 845563 845575 NHLH1 JASPAR yes 26172032
chr1 845563 845575 NHLH1 JASPAR yes 118213151
chr1 845564 845574 NHLH1 JASPAR yes 26172033
chr1 845564 845574 NHLH1 JASPAR yes 118213152
chr1 845590 845595 SP1 TRANSFAC yes 26172034
chr1 845590 845595 SP1 TRANSFAC yes 118213153
chr1 845618 845633 TFAP2A JASPAR yes 26172035
chr1 845618 845633 TFAP2C JASPAR yes 26172036
chr1 845618 845633 TFAP2A JASPAR yes 118213154
chr1 845618 845633 TFAP2C JASPAR yes 118213155
chr1 845620 845629 TFAP2A JASPAR yes 26172037
chr1 845620 845629 TFAP2A JASPAR yes 118213156
chr1 845629 845640 NRF1 JASPAR yes 26172038
chr1 845629 845640 NRF1 JASPAR yes 118213157
chr1 845638 845648 SP1 JASPAR yes 26172039
chr1 845638 845648 SP1 JASPAR yes 118213158
chr1 845642 845655 NFKB1 JASPAR yes 26172040
chr1 845642 845655 NFKB1 JASPAR yes 118213159
chr1 845643 845654 NFKB1 JASPAR yes 26172041
chr1 845643 845654 NFKB1 JASPAR yes 118213160
chr1 845645 845650 SP1 TRANSFAC yes 26172042
chr1 845645 845650 SP1 TRANSFAC yes 118213161
chr1 845659 845663 NFE TRANSFAC yes 26172043
chr1 845659 845663 NFE TRANSFAC yes 118213162
chr1 845674 845685 GCM1 JASPAR yes 26172044
chr1 845674 845685 GCM1 JASPAR yes 118213163
SNP sites on vista3[chr1:845485-845678]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 845509 rs565071104 T G
RREB1 SP1 ZNF263 ZNF740
814
chr1 845538 rs530654212 A G
NFY
815
chr1 845589 rs550844301 G A no 816
chr1 845593 rs191964043 G A
SP1
817
chr1 845601 rs372401745 G A no 818
chr1 845635 rs117086422 C T
NRF1
819
Genes possibly regulated by vista3[chr1:845485-845678]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 818043 819983 + AL645608.2 ENSG00000269308.1 818043 0.0 0.0 4 72558
chr1 860260 879955 + SAMD11 ENSG00000187634.6 860260 0.92 1.0 5 85418
chr1 861264 866445 - AL645608.1 ENSG00000268179.1 866445 1.0 1.0 6 79233
chr1 879584 894689 - NOC2L ENSG00000188976.6 894689 0.69 1.0 7 50989
chr1 895967 901095 + KLHL17 ENSG00000187961.9 895967 0.67 1.0 8 49711
chr1 901877 911245 + PLEKHN1 ENSG00000187583.6 901877 0.96 1.0 9 43801
chr1 910579 917497 - C1orf170 ENSG00000187642.5 917497 0.99 1.0 10 28181
chr1 934342 935552 - HES4 ENSG00000188290.6 935552 0.71 1.0 11 10126
Expression level of Genes
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miRNAs possibly regulated by vista3[chr1:845485-845678]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results