EnhancerDB
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  3. vista3016[chr1:115046601-115046805]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3016[chr1:115046601-115046805]
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Tissue distribution of vista3016
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Transcription factor that possibly regulate vista3016[chr1:115046601-115046805]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 115046597 115046601 YY1 TRANSFAC yes 31694752
chr1 115046597 115046601 YY1 TRANSFAC yes 118354760
chr1 115046625 115046639 TCF7L2 JASPAR yes 31694753
chr1 115046625 115046639 TCF7L2 JASPAR yes 118354761
chr1 115046625 115046640 LEF1 JASPAR yes 31694754
chr1 115046625 115046640 LEF1 JASPAR yes 118354762
chr1 115046639 115046655 SOX4 JASPAR yes 31694755
chr1 115046639 115046655 SOX4 JASPAR yes 118354763
chr1 115046659 115046666 TBP TRANSFAC yes 31694756
chr1 115046659 115046666 TFIID TRANSFAC yes 31694757
chr1 115046659 115046666 TBP TRANSFAC yes 118354764
chr1 115046659 115046666 TFIID TRANSFAC yes 118354765
chr1 115046667 115046672 GATA2 JASPAR yes 31694758
chr1 115046667 115046672 GATA2 JASPAR yes 118354766
chr1 115046671 115046691 PPARG JASPAR yes 31694759
chr1 115046671 115046691 PPARG JASPAR yes 118354767
chr1 115046673 115046691 ESR2 JASPAR yes 31694760
chr1 115046673 115046691 ESR2 JASPAR yes 118354768
chr1 115046678 115046693 SOX21 JASPAR yes 31694761
chr1 115046678 115046693 SOX21 JASPAR yes 118354769
chr1 115046690 115046705 MEF2A JASPAR yes 31694762
chr1 115046690 115046705 MEF2A JASPAR yes 118354770
chr1 115046691 115046706 MEF2C JASPAR yes 31694763
chr1 115046691 115046706 MEF2C JASPAR yes 118354771
chr1 115046693 115046708 LEF1 JASPAR yes 31694764
chr1 115046693 115046708 LEF1 JASPAR yes 118354772
chr1 115046694 115046698 YY1 TRANSFAC yes 31694765
chr1 115046694 115046698 YY1 TRANSFAC yes 118354773
chr1 115046697 115046703 TCF4 TRANSFAC yes 31694766
chr1 115046697 115046703 TCF4 TRANSFAC yes 118354774
chr1 115046713 115046723 TBX21 JASPAR yes 31694767
chr1 115046713 115046723 TBX21 JASPAR yes 118354775
chr1 115046713 115046724 TBX2 JASPAR yes 31694768
chr1 115046713 115046724 TBX2 JASPAR yes 118354776
chr1 115046713 115046726 EOMES JASPAR yes 31694769
chr1 115046713 115046726 EOMES JASPAR yes 118354777
chr1 115046714 115046724 TBR1 JASPAR yes 31694770
chr1 115046714 115046724 TBR1 JASPAR yes 118354778
chr1 115046719 115046733 FOXF2 JASPAR yes 31694771
chr1 115046719 115046733 FOXF2 JASPAR yes 118354779
chr1 115046720 115046731 FOXA1 JASPAR yes 31694772
chr1 115046720 115046731 FOXA1 JASPAR yes 118354780
chr1 115046720 115046735 FOXA1 JASPAR yes 31694773
chr1 115046720 115046735 FOXA1 JASPAR yes 118354781
chr1 115046720 115046736 POU4F2 JASPAR yes 31694774
chr1 115046720 115046736 POU4F2 JASPAR yes 118354782
chr1 115046721 115046732 FOXB1 JASPAR yes 31694775
chr1 115046721 115046732 FOXC1 JASPAR yes 31694776
chr1 115046721 115046732 FOXB1 JASPAR yes 118354783
chr1 115046721 115046732 FOXC1 JASPAR yes 118354784
chr1 115046721 115046733 FOXC2 JASPAR yes 31694777
chr1 115046721 115046733 FOXC2 JASPAR yes 118354785
chr1 115046740 115046751 CDX2 JASPAR yes 31694778
chr1 115046740 115046751 CDX2 JASPAR yes 118354786
chr1 115046749 115046763 TLX1 JASPAR yes 31694779
chr1 115046749 115046763 TLX1 JASPAR yes 118354787
chr1 115046750 115046764 TLX1 JASPAR yes 31694780
chr1 115046750 115046764 TLX1 JASPAR yes 118354788
chr1 115046761 115046765 YY1 TRANSFAC yes 31694781
chr1 115046761 115046765 YY1 TRANSFAC yes 118354789
chr1 115046763 115046784 IRF1 JASPAR yes 31694782
chr1 115046763 115046784 IRF1 JASPAR yes 118354790
chr1 115046764 115046769 GATA2 JASPAR yes 31694783
chr1 115046764 115046769 GATA2 JASPAR yes 118354791
chr1 115046768 115046783 FOXP1 JASPAR yes 31694784
chr1 115046768 115046783 FOXP1 JASPAR yes 118354792
chr1 115046768 115046789 IRF1 JASPAR yes 31694785
chr1 115046768 115046789 IRF1 JASPAR yes 118354793
chr1 115046770 115046785 FOXP1 JASPAR yes 31694786
chr1 115046770 115046785 FOXP1 JASPAR yes 118354794
chr1 115046774 115046789 FOXP1 JASPAR yes 31694787
chr1 115046774 115046789 FOXP1 JASPAR yes 118354795
chr1 115046775 115046787 FOXC2 JASPAR yes 31694788
chr1 115046775 115046787 FOXC2 JASPAR yes 118354796
chr1 115046776 115046787 FOXC1 JASPAR yes 31694789
chr1 115046776 115046787 FOXC1 JASPAR yes 118354797
chr1 115046776 115046797 IRF1 JASPAR yes 31694790
chr1 115046776 115046797 IRF1 JASPAR yes 118354798
chr1 115046777 115046781 YY1 TRANSFAC yes 31694791
chr1 115046777 115046781 YY1 TRANSFAC yes 118354799
chr1 115046778 115046793 FOXP1 JASPAR yes 31694792
chr1 115046778 115046793 FOXP1 JASPAR yes 118354800
chr1 115046782 115046797 FOXP1 JASPAR yes 31694793
chr1 115046782 115046797 FOXP1 JASPAR yes 118354801
chr1 115046783 115046795 FOXC2 JASPAR yes 31694794
chr1 115046783 115046795 FOXC2 JASPAR yes 118354802
chr1 115046785 115046789 YY1 TRANSFAC yes 31694795
chr1 115046785 115046789 YY1 TRANSFAC yes 118354803
chr1 115046787 115046802 FOXP1 JASPAR yes 31694796
chr1 115046787 115046802 FOXP1 JASPAR yes 118354804
chr1 115046792 115046804 FOXC2 JASPAR yes 31694797
chr1 115046792 115046804 FOXC2 JASPAR yes 118354805
chr1 115046793 115046804 FOXC1 JASPAR yes 31694798
chr1 115046793 115046804 FOXC1 JASPAR yes 118354806
chr1 115046794 115046798 YY1 TRANSFAC yes 31694799
chr1 115046794 115046798 YY1 TRANSFAC yes 118354807
SNP sites on vista3016[chr1:115046601-115046805]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 115046726 rs114601887 T A
EOMES FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 POU4F2
576224
chr1 115046787 rs550970951 A AT
FOXC1 FOXC2 FOXP1 IRF1 YY1
576225
chr1 115046791 rs572081368 T A
FOXC2 FOXP1 IRF1
576226
Genes possibly regulated by vista3016[chr1:115046601-115046805]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 114935399 115053781 - TRIM33 ENSG00000197323.6 115053781 0.72 0.99 1043 93024
chr1 115110178 115124260 - BCAS2 ENSG00000116752.5 115124260 0.6 0.98 1044 22545
Expression level of Genes
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miRNAs possibly regulated by vista3016[chr1:115046601-115046805]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results