EnhancerDB
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  3. vista3020[chr1:115445129-115445499]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3020[chr1:115445129-115445499]
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Tissue distribution of vista3020
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Transcription factor that possibly regulate vista3020[chr1:115445129-115445499]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 115445135 115445140 MYB TRANSFAC yes 31703847
chr1 115445135 115445140 MYB TRANSFAC yes 118354928
chr1 115445137 115445153 RFX4 JASPAR yes 31703848
chr1 115445137 115445153 RFX4 JASPAR yes 118354929
chr1 115445143 115445153 HMBOX1 JASPAR yes 31703849
chr1 115445143 115445153 HMBOX1 JASPAR yes 118354930
chr1 115445148 115445159 RUNX1 JASPAR yes 31703850
chr1 115445148 115445159 RUNX1 JASPAR yes 118354931
chr1 115445166 115445184 ESR2 JASPAR yes 31703851
chr1 115445166 115445184 ESR2 JASPAR yes 118354932
chr1 115445169 115445173 ESR1 TRANSFAC yes 31703852
chr1 115445169 115445173 ESR1 TRANSFAC yes 118354933
chr1 115445171 115445182 ESRRB JASPAR yes 31703853
chr1 115445171 115445182 ESRRB JASPAR yes 118354934
chr1 115445215 115445221 SP1 TRANSFAC yes 31703854
chr1 115445215 115445221 SP1 TRANSFAC yes 118354935
chr1 115445217 115445222 SP1 TRANSFAC yes 31703855
chr1 115445217 115445222 SP1 TRANSFAC yes 118354936
chr1 115445222 115445226 NFE TRANSFAC yes 31703856
chr1 115445222 115445226 NFE TRANSFAC yes 118354937
chr1 115445235 115445239 LFA1 TRANSFAC yes 31703857
chr1 115445235 115445239 LFA1 TRANSFAC yes 118354938
chr1 115445249 115445270 REST JASPAR yes 31703858
chr1 115445249 115445270 REST JASPAR yes 118354939
chr1 115445253 115445264 EBF1 JASPAR yes 31703859
chr1 115445253 115445264 EBF1 JASPAR yes 118354940
chr1 115445265 115445280 FOXP1 JASPAR yes 31703860
chr1 115445265 115445280 FOXP1 JASPAR yes 118354941
chr1 115445281 115445291 POU6F2 JASPAR yes 31703861
chr1 115445281 115445291 POU6F2 JASPAR yes 118354942
chr1 115445283 115445299 POU4F2 JASPAR yes 31703862
chr1 115445283 115445299 POU4F3 JASPAR yes 31703863
chr1 115445283 115445299 POU4F2 JASPAR yes 118354943
chr1 115445283 115445299 POU4F3 JASPAR yes 118354944
chr1 115445285 115445289 YY1 TRANSFAC yes 31703864
chr1 115445285 115445289 YY1 TRANSFAC yes 118354945
chr1 115445285 115445299 POU4F1 JASPAR yes 31703865
chr1 115445285 115445299 POU4F1 JASPAR yes 118354946
chr1 115445297 115445311 ONECUT3 JASPAR yes 31703866
chr1 115445297 115445311 ONECUT3 JASPAR yes 118354947
chr1 115445319 115445337 ESR2 JASPAR yes 31703867
chr1 115445319 115445337 ESR2 JASPAR yes 118354948
chr1 115445328 115445346 NFYA JASPAR yes 31703868
chr1 115445328 115445346 NFYA JASPAR yes 118354949
chr1 115445333 115445345 PBX1 JASPAR yes 31703869
chr1 115445333 115445345 PBX1 JASPAR yes 118354950
chr1 115445334 115445349 NFYB JASPAR yes 31703870
chr1 115445334 115445349 NFYB JASPAR yes 118354951
chr1 115445336 115445341 NFY TRANSFAC yes 31703871
chr1 115445336 115445341 NFY TRANSFAC yes 118354952
chr1 115445407 115445417 NFATC3 JASPAR yes 31703872
chr1 115445407 115445417 NFATC3 JASPAR yes 118354953
chr1 115445408 115445415 NFATC2 JASPAR yes 31703873
chr1 115445408 115445415 NFATC2 JASPAR yes 118354954
chr1 115445422 115445432 NFATC3 JASPAR yes 31703874
chr1 115445422 115445432 NFATC3 JASPAR yes 118354955
chr1 115445424 115445431 NFATC2 JASPAR yes 31703875
chr1 115445424 115445431 NFATC2 JASPAR yes 118354956
chr1 115445438 115445452 POU4F1 JASPAR yes 31703876
chr1 115445438 115445452 POU4F1 JASPAR yes 118354957
chr1 115445438 115445454 POU4F2 JASPAR yes 31703877
chr1 115445438 115445454 POU4F3 JASPAR yes 31703878
chr1 115445438 115445454 POU4F2 JASPAR yes 118354958
chr1 115445438 115445454 POU4F3 JASPAR yes 118354959
chr1 115445443 115445447 YY1 TRANSFAC yes 31703879
chr1 115445443 115445447 YY1 TRANSFAC yes 118354960
chr1 115445482 115445496 SPIC JASPAR yes 31703880
chr1 115445482 115445496 SPIC JASPAR yes 118354961
chr1 115445483 115445494 FOS JASPAR yes 31703881
chr1 115445483 115445494 FOS JASPAR yes 118354962
chr1 115445484 115445495 JUNB JASPAR yes 31703882
chr1 115445484 115445495 JUNB JASPAR yes 118354963
chr1 115445485 115445496 BATF JASPAR yes 31703883
chr1 115445485 115445496 BATF JASPAR yes 118354964
chr1 115445490 115445494 YY1 TRANSFAC yes 31703884
chr1 115445490 115445494 YY1 TRANSFAC yes 118354965
chr1 115445494 115445497 MYB TRANSFAC yes 31703885
chr1 115445494 115445497 MYB TRANSFAC yes 118354966
chr1 115445499 115445509 MYF6 JASPAR yes 31703886
chr1 115445499 115445509 NEUROG2 JASPAR yes 31703887
chr1 115445499 115445509 MYF6 JASPAR yes 118354967
chr1 115445499 115445509 NEUROG2 JASPAR yes 118354968
SNP sites on vista3020[chr1:115445129-115445499]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 115445146 rs535158115 T C
HMBOX1 RFX4
577127
chr1 115445157 rs374881444 T G
RUNX1
577128
chr1 115445379 rs78849809 G A no 577129
chr1 115445478 rs360652 C T no 577130
Genes possibly regulated by vista3020[chr1:115445129-115445499]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 115397424 115537991 + SYCP1 ENSG00000198765.7 115397424 0.97 0.0 1050 52295
Expression level of Genes
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miRNAs possibly regulated by vista3020[chr1:115445129-115445499]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results