EnhancerDB
  1. Home
  2. Enhancers
  3. vista3025[chr1:115629152-115629329]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3025[chr1:115629152-115629329]
Back to top
Tissue distribution of vista3025
Back to top
Transcription factor that possibly regulate vista3025[chr1:115629152-115629329]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 115629160 115629167 NKX3-1 JASPAR yes 31707450
chr1 115629160 115629167 NKX3-1 JASPAR yes 118355157
chr1 115629192 115629195 MYB TRANSFAC yes 31707451
chr1 115629192 115629195 MYB TRANSFAC yes 118355158
chr1 115629197 115629209 HNF1B JASPAR yes 31707452
chr1 115629197 115629209 HNF1B JASPAR yes 118355159
chr1 115629199 115629209 HMBOX1 JASPAR yes 31707453
chr1 115629199 115629209 HMBOX1 JASPAR yes 118355160
chr1 115629204 115629214 TBX21 JASPAR yes 31707454
chr1 115629204 115629214 TBX21 JASPAR yes 118355161
chr1 115629205 115629208 MYB TRANSFAC yes 31707455
chr1 115629205 115629208 MYB TRANSFAC yes 118355162
chr1 115629216 115629225 NKX3-2 JASPAR yes 31707456
chr1 115629216 115629225 NKX3-2 JASPAR yes 118355163
chr1 115629216 115629226 NKX2-3 JASPAR yes 31707457
chr1 115629216 115629226 NKX2-3 JASPAR yes 118355164
chr1 115629217 115629225 ISL2 JASPAR yes 31707458
chr1 115629217 115629225 ISL2 JASPAR yes 118355165
chr1 115629217 115629226 NKX2-8 JASPAR yes 31707459
chr1 115629217 115629226 NKX2-8 JASPAR yes 118355166
chr1 115629238 115629249 FLI1 JASPAR yes 31707460
chr1 115629238 115629249 FLI1 JASPAR yes 118355167
chr1 115629239 115629252 ELF1 JASPAR yes 31707461
chr1 115629239 115629252 ELF1 JASPAR yes 118355168
chr1 115629240 115629247 SPI1 JASPAR yes 31707462
chr1 115629240 115629247 SPI1 JASPAR yes 118355169
chr1 115629240 115629248 FEV JASPAR yes 31707463
chr1 115629240 115629248 FEV JASPAR yes 118355170
chr1 115629242 115629247 ETS2 TRANSFAC yes 31707464
chr1 115629242 115629247 ETS2 TRANSFAC yes 118355171
chr1 115629247 115629252 ETS2 TRANSFAC yes 31707465
chr1 115629247 115629252 ETS2 TRANSFAC yes 118355172
chr1 115629264 115629268 ESR1 TRANSFAC yes 31707466
chr1 115629264 115629268 ESR1 TRANSFAC yes 118355173
chr1 115629275 115629287 TGIF1 JASPAR yes 31707467
chr1 115629275 115629287 TGIF2 JASPAR yes 31707468
chr1 115629275 115629287 TGIF1 JASPAR yes 118355174
chr1 115629275 115629287 TGIF2 JASPAR yes 118355175
chr1 115629288 115629299 FOXH1 JASPAR yes 31707469
chr1 115629288 115629299 FOXH1 JASPAR yes 118355176
chr1 115629299 115629303 NFE TRANSFAC yes 31707470
chr1 115629299 115629303 NFE TRANSFAC yes 118355177
chr1 115629302 115629317 MEF2C JASPAR yes 31707471
chr1 115629302 115629317 MEF2C JASPAR yes 118355178
chr1 115629305 115629309 YY1 TRANSFAC yes 31707472
chr1 115629305 115629309 YY1 TRANSFAC yes 118355179
chr1 115629323 115629328 GATA2 JASPAR yes 31707473
chr1 115629323 115629328 GATA2 JASPAR yes 118355180
chr1 115629324 115629330 ZNF354C JASPAR yes 31707474
chr1 115629324 115629330 ZNF354C JASPAR yes 118355181
SNP sites on vista3025[chr1:115629152-115629329]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista3025[chr1:115629152-115629329]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 115572415 115576941 + TSHB ENSG00000134200.2 115572415 0.92 0.0 1051 43263
chr1 115590632 115632121 - TSPAN2 ENSG00000134198.5 115632121 0.89 0.99 1052 97208
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3025[chr1:115629152-115629329]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results