EnhancerDB
  1. Home
  2. Enhancers
  3. vista3026[chr1:115641281-115641604]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3026[chr1:115641281-115641604]
Back to top
Tissue distribution of vista3026
Back to top
Transcription factor that possibly regulate vista3026[chr1:115641281-115641604]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 115641521 115641885 EBF1 UCSC Txn Factor no Conserved 107823440
chr1 115641276 115641281 GATA1 TRANSFAC yes 31708015
chr1 115641276 115641281 GATA1 TRANSFAC yes 118355182
chr1 115641300 115641306 TCF4 TRANSFAC yes 31708016
chr1 115641300 115641306 TCF4 TRANSFAC yes 118355183
chr1 115641312 115641323 NFKB1 JASPAR yes 31708017
chr1 115641312 115641323 NFKB1 JASPAR yes 118355184
chr1 115641318 115641336 NR3C1 JASPAR yes 31708018
chr1 115641318 115641336 NR3C1 JASPAR yes 118355185
chr1 115641324 115641338 ONECUT1 JASPAR yes 31708019
chr1 115641324 115641338 ONECUT2 JASPAR yes 31708020
chr1 115641324 115641338 ONECUT3 JASPAR yes 31708021
chr1 115641324 115641338 ONECUT1 JASPAR yes 118355186
chr1 115641324 115641338 ONECUT2 JASPAR yes 118355187
chr1 115641324 115641338 ONECUT3 JASPAR yes 118355188
chr1 115641325 115641335 CUX1 JASPAR yes 31708022
chr1 115641325 115641335 CUX2 JASPAR yes 31708023
chr1 115641325 115641335 CUX1 JASPAR yes 118355189
chr1 115641325 115641335 CUX2 JASPAR yes 118355190
chr1 115641345 115641350 ETS2 TRANSFAC yes 31708024
chr1 115641345 115641350 ETS2 TRANSFAC yes 118355191
chr1 115641349 115641365 ZNF143 JASPAR yes 31708025
chr1 115641349 115641365 ZNF143 JASPAR yes 118355192
chr1 115641350 115641361 FOXH1 JASPAR yes 31708026
chr1 115641350 115641361 FOXH1 JASPAR yes 118355193
chr1 115641351 115641368 ZNF410 JASPAR yes 31708027
chr1 115641351 115641368 ZNF410 JASPAR yes 118355194
chr1 115641377 115641395 MAFF JASPAR yes 31708028
chr1 115641377 115641395 MAFF JASPAR yes 118355195
chr1 115641379 115641390 NRL JASPAR yes 31708029
chr1 115641379 115641390 NRL JASPAR yes 118355196
chr1 115641379 115641394 MAFK JASPAR yes 31708030
chr1 115641379 115641394 MAFK JASPAR yes 118355197
chr1 115641391 115641396 ETS2 TRANSFAC yes 31708031
chr1 115641391 115641396 ETS2 TRANSFAC yes 118355198
chr1 115641400 115641408 HOXA5 JASPAR yes 31708032
chr1 115641400 115641408 HOXA5 JASPAR yes 118355199
chr1 115641401 115641413 E2F8 JASPAR yes 31708033
chr1 115641401 115641413 E2F8 JASPAR yes 118355200
chr1 115641440 115641451 EBF1 JASPAR yes 31708034
chr1 115641440 115641451 EBF1 JASPAR yes 118355201
chr1 115641465 115641477 POU3F2 JASPAR yes 31708035
chr1 115641465 115641477 POU3F2 JASPAR yes 118355202
chr1 115641517 115641521 YY1 TRANSFAC yes 31708036
chr1 115641517 115641521 YY1 TRANSFAC yes 118355203
chr1 115641527 115641542 RUNX2 JASPAR yes 31708037
chr1 115641527 115641542 RUNX2 JASPAR yes 118355204
chr1 115641544 115641558 EBF1 JASPAR yes 31708038
chr1 115641544 115641558 EBF1 JASPAR yes 118355205
chr1 115641546 115641557 EBF1 JASPAR yes 31708039
chr1 115641546 115641557 EBF1 JASPAR yes 118355206
chr1 115641561 115641567 MZF1 JASPAR yes 31708040
chr1 115641561 115641567 MZF1 JASPAR yes 118355207
chr1 115641593 115641597 YY1 TRANSFAC yes 31708041
chr1 115641593 115641597 YY1 TRANSFAC yes 118355208
chr1 115641598 115641604 SOX10 JASPAR yes 31708042
chr1 115641598 115641604 SOX10 JASPAR yes 118355209
SNP sites on vista3026[chr1:115641281-115641604]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 115641362 rs535774561 T C
ZNF143 ZNF410
577564
chr1 115641536 rs537006280 T C
EBF1 RUNX2
577565
Genes possibly regulated by vista3026[chr1:115641281-115641604]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 115572415 115576941 + TSHB ENSG00000134200.2 115572415 0.92 0.0 1051 31134
chr1 115590632 115632121 - TSPAN2 ENSG00000134198.5 115632121 0.89 0.99 1052 90840
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3026[chr1:115641281-115641604]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results